Clone Sequence Records
BO05458.3prime Sequence
896 bp (866 high quality bases) assembled on 2005-12-02
> BO05458.3prime
ATGGTCTAGAAAGCTTGCGTTATGCACGACGCCTGAGGAATGTTGAATGC
TTCGTTCAAATTCTTCCAAACTGAGTGCTTGGTTCACATTTAAAAGTGGC
AGTTTTCCAGCAGAGGCTTTTGCAAGAAGCTCAGGGGAAAACCATTGCGC
CAATTGATTGGTTGGTGATGAAATCCTCTCATCTCTCTGGTAGCTAGGAG
ATGTGAGGCTGTTTGCTTTGATCACATTACCGGAATCGGAGCTGTCAGAA
AAACCTGGGACTGGCGGAGACATTTGTGGATTTGATTGACGGTGCATTTC
TCCATAAATCACTCTTTGACTAAGCTGCTGTCGTGTGTGATGATGTTGTT
GCTGATGTTGCATGTAAAGTTGGTGCCATCCAACAGGAGATGTAATGTTT
TGGTGAACACTTTCGGTATTCAGATTTGATTCCACAGATTGAACTGCTTT
AAATCTATGTTGCTGCTGCTGTAGATGTGGTTGATGAATGGGTTGCATTT
CAATTTTATGGGCAGTAAAAGGAAGTGCAGAATTGGAATGCGGCATTGAA
TTAAGACCTCCTTTCAGAATAGGTCGGCCAAATGTTTTTCCGTGGACCAT
TTGCATATTGCCAGAAGTCCACTTTAACACTTGTTGATTACGACTTTGTG
ACATGTTGGGAGACAAATGTTGATTGTTTTGGCCAATGGCAAAGTTTCCA
CCGCCTAATATCATTCGGGGCTGTACAGCCATTGTTGCGGTCAGCTGTGG
CTCAAGTACGTTCTCACGAGTACCGACTTGCTTGGCATTTTGTTGGTGTA
CATGATATTGTGGGTTCTGACAATAAGTGCTTGGTGATTGCGTATCCTTA
TCGGCTGTCATTTTTCTTAAAACTGAAGTAGGAGTAAATGCCAACG
BO05458.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:21:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32016-PE | 1500 | CG32016-RE | 620..1497 | 896..19 | 4390 | 100 | Minus |
| CG32016-PB | 3033 | CG32016-RB | 2153..3030 | 896..19 | 4390 | 100 | Minus |
| CG32016-PA | 3009 | CG32016-RA | 2129..3006 | 896..19 | 4390 | 100 | Minus |
| CG32016-PF | 1500 | CG32016-RF | 620..1497 | 896..19 | 4390 | 100 | Minus |
| CG32016-PD | 1500 | CG32016-RD | 620..1497 | 896..19 | 4390 | 100 | Minus |
| CG32016-PC | 3033 | CG32016-RC | 2153..3030 | 896..19 | 4390 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:19:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4E-T-RG | 3526 | CG32016-RG | 2349..3226 | 896..19 | 4390 | 100 | Minus |
| 4E-T-RC | 3691 | CG32016-RC | 2514..3391 | 896..19 | 4390 | 100 | Minus |
| 4E-T-RB | 3501 | CG32016-RB | 2324..3201 | 896..19 | 4390 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:19:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 952136..952462 | 253..579 | 1635 | 100 | Plus |
| 4 | 1348131 | 4 | 953512..953830 | 578..896 | 1595 | 100 | Plus |
| 4 | 1348131 | 4 | 951842..952079 | 19..256 | 1190 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 01:19:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6761..6923 | 486..327 | 130 | 57.3 | Minus |
| Dvir\Tv1 | 6868 | Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). | 318..370 | 470..418 | 130 | 71.7 | Minus |
| Dvir\Tv1 | 6868 | Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). | 6733..6785 | 470..418 | 130 | 71.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2511..2722 | 486..278 | 129 | 57.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6890..7052 | 486..324 | 121 | 56.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6782..6948 | 486..315 | 117 | 58.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1542..1583 | 486..444 | 113 | 76.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2315..2364 | 376..324 | 113 | 73.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2354..2406 | 376..324 | 112 | 67.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2380..2539 | 500..344 | 108 | 57.3 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1111..1169 | 496..437 | 108 | 66.7 | Minus |
BO05458.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:22:40 Download gff for
BO05458.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32016-PA | 2129..3009 | 15..896 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:44:39 Download gff for
BO05458.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32016-PC | 2153..3033 | 15..896 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:41:08 Download gff for
BO05458.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32016-RF | 886..1768 | 12..896 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:31:07 Download gff for
BO05458.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4E-T-RB | 2324..3206 | 12..896 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:31:07 Download gff for
BO05458.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 951837..952077 | 12..254 | 98 | <- | Plus |
| 4 | 952138..952461 | 255..578 | 100 | <- | Plus |
| 4 | 953513..953830 | 579..896 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:41:08 Download gff for
BO05458.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 972463..972703 | 12..254 | 98 | <- | Plus |
| arm_4 | 972764..973087 | 255..578 | 100 | <- | Plus |
| arm_4 | 974139..974456 | 579..896 | 100 | | Plus |
BO05458.5prime Sequence
873 bp (832 high quality bases) assembled on 2005-12-02
> BO05458.5prime
GAAGTTATCAGTCGACATGGATACATCAAAGATTAGTGCCAGGTACTCGA
AAGTAGACCTGTTAGCTCTAAGATATGAAGGTAAAAGTCGACAGCGCCCG
CAATGTTCAACACGACTTGAATTGCAGACGCTAGGTTTTTGGAAAATTAA
TCTGAACACAGCTGCGTTAACCGTGTCCAGCGCCTATTCTAATCAAAACA
AGAATCGACTTTCTCCAGAAGCAGATAACTCGAGCTTAATTTGTTCCAAT
AGTAGCTCAATAAGTTCACGTCGCGCTATGAGAAATCGAGAACGGGCAAA
CAACTATTACCAGCGCTTCGTACCTACCGATTCTCTTCTAATAAGTGGGG
AGGATAAAGATAAGGATGCGCTTTCTCATGGACAGCCCTATAAGTTGAAT
ATCATCGATCACCGTAGCATATCATCTTCACATTTAATGCCGGCATTTGC
AAAGAGGCGTTTTGTCATATCGAAAGGCAGCAACAGCGAGGAAAGCAACG
AGGGGATAAACACTTGTGCAAGCAAGGGCAAGGCAGCCAGTTCGCCTAGC
CGTAAGGGTAGCGAGTTGGATACTGCTGAGACATGTTTGAATTTTGTTCA
GCCGGATCACGACCAATGCATGTCATCTTCACCTACATTTTCAACATCCC
GCCAAGAAAGGCGGATTGGTAGCGGTCGGCTGTTGCCAAGAAGTGATAAT
TGGGATTACAAAAACGAAAAGACCGTAGAAGCCAGCATTGAGAATGAAAA
GGAAACATCTCCAAATGGATCTGGAAGTACAAGCAGTCTTAATCAGCACA
ATCAAAGCCAACATCGTTCTCGAACATTCAGTGGAAGGTTAGTTGAACGT
GTTCCCGAAGTCACAGATCGTCG
BO05458.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:21:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32016-PB | 3033 | CG32016-RB | 1..857 | 17..873 | 4285 | 100 | Plus |
| CG32016-PC | 3033 | CG32016-RC | 1..857 | 17..873 | 4285 | 100 | Plus |
| CG32016-PA | 3009 | CG32016-RA | 3..833 | 43..873 | 4155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:54:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4E-T-RH | 3376 | CG32016-RH | 140..996 | 17..873 | 4285 | 100 | Plus |
| 4E-T-RG | 3526 | CG32016-RG | 197..1053 | 17..873 | 4285 | 100 | Plus |
| 4E-T-RC | 3691 | CG32016-RC | 362..1218 | 17..873 | 4285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:54:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 957059..957891 | 873..41 | 4165 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:54:26 has no hits.
BO05458.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:22:41 Download gff for
BO05458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32016-PC | 1..857 | 17..873 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:44:40 Download gff for
BO05458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32016-PC | 1..857 | 17..873 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:10:22 Download gff for
BO05458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32016-RC | 358..1218 | 10..873 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:20:30 Download gff for
BO05458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4E-T-RC | 358..1218 | 10..873 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:20:30 Download gff for
BO05458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 957059..957889 | 43..873 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:10:22 Download gff for
BO05458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 977685..978515 | 43..873 | 100 | <- | Minus |
BO05458.complete Sequence
3064 bp assembled on 2008-08-14
GenBank Submission: FJ630046
> BO05458.complete
GAAGTTATCAGTCGACATGGATACATCAAAGATTAGTGCCAGGTACTCGA
AAGTAGACCTGTTAGCTCTAAGATATGAAGGTAAAAGTCGACAGCGCCCG
CAATGTTCAACACGACTTGAATTGCAGACGCTAGGTTTTTGGAAAATTAA
TCTGAACACAGCTGCGTTAACCGTGTCCAGCGCCTATTCTAATCAAAACA
AGAATCGACTTTCTCCAGAAGCAGATAACTCGAGCTTAATTTGTTCCAAT
AGTAGCTCAATAAGTTCACGTCGCGCTATGAGAAATCGAGAACGGGCAAA
CAACTATTACCAGCGCTTCGTACCTACCGATTCTCTTCTAATAAGTGGGG
AGGATAAAGATAAGGATGCGCTTTCTCATGGACAGCCCTATAAGTTGAAT
ATCATCGATCACCGTAGCATATCATCTTCACATTTAATGCCGGCATTTGC
AAAGAGGCGTTTTGTCATATCGAAAGGCAGCAACAGCGAGGAAAGCAACG
AGGGGATAAACACTTGTGCAAGCAAGGGCAAGGCAGCCAGTTCGCCTAGC
CGTAAGGGTAGCGAGTTGGATACTGCTGAGACATGTTTGAATTTTGTTCA
GCCGGATCACGACCAATGCATGTCATCTTCACCTACATTTTCAACATCCC
GCCAAGAAAGGCGGATTGGTAGCGGTCGGCTGTTGCCAAGAAGTGATAAT
TGGGATTACAAAAACGAAAAGACCGTAGAAGCCAGCATTGAGAATGAAAA
GGAAACATCTCCAAATGGATCTGGAAGTACAAGCAGTCTTAATCAGCACA
ATCAAAGCCAACATCGTTCTCGAACATTCAGTGGAAGGTTAGTTGAACGT
GTTCCCGAAGTCACAGATCGTCGTTTTCAATATGACTCCAAAAAGTCTTT
TGATCGTCAGGGAATTAATAATCGACGCATTTCTGGTAAGGAGCCTTTCA
GTACTCAAAGCCGAAGCAAGCGTGGCAATTCCTATCTCATTCACGAAGAA
CCTGAATGGTTCAGTGCAGGACCTAAATCACAGCTAGAAACTATTGATCT
ACACGGGTTTGAAGACCTGGAAAAAAACGAAGAGCGATCCGTAACTGAAG
ATAAAAATAATCAAATTCAACAACTTGATAAAAATTTAGACGCGCAAGCA
AGCAAAGATGAAGCTTCGATGAGAAACAGCAATGATAGTTTAAATTTCCG
CGAAGTCATTCCAAGTGATGAAAAGAAGCACACTGACGAAAATGTAGTGA
CTTCTATTCAAAACTCAACAGATCTCGGCCATCCCAATAAAAACAAACCA
ATTCAGATGCAGCCCAGTCAGAATCCTGAAAGTGAATTTAATTTTGATGC
CTTTCTTAATATGCATCCCTTGGATAATTCCGTTTTGAGTAATGATGAAA
CTGGAAAAAGTGACTCAAAAGGAACATCCCGTTTTAGCCGATGGTTTCGA
CAAAAAGAAGCTGCAAATAATAATGAGTTTCCAGGGTTTCGGGAATCGCA
TGCTCAAGAAAAACGTGGTATTCCAAGTGTTAAGGATCTGGAAGCTCAAA
TGATAAAAGTGGATATGAGGACTGATTTAATAAATCCAATAGCAGGGTCA
TTATGTCAGACAGTGCAAATGGAAAAACCTATTGCTAGAGACACTGAGGC
ATTCAAAAAACTTTTGCAACAGTTGGGTTCTCAAGCCAGGCAGCATCATC
CATGCAACGACGATTGTCGTACAATAAACCTCTCAAATATAGCAAATCAT
GTACACCTTGAGTCAAAATTACATCAAAAAATAAATGATGGTCATTTGCA
GCAACCAGAGTTAAGTGTTAACGTGCCAACCATGCCAACTAGTAGTCATG
TATTTTTGCAAAAGCGTTTGGAAATCCAACATTTAATTCAAAGACTTCAT
TGTGGAGACGTTTCACATGATTTTTTGGAAAAAGAATTGGATAATCCCAG
CACCCCAGCAGCCACAAAGGATGTCATTGCCACAGTGTTGAATGAATATT
CTCATTCTAAAAGAAATCCGGTGGTCACAGGCGATCCCAATATTTTTACC
CAACAATCGTTTCTTCAGCCTCAATCAGTCCATCAGCACTACTCTCAAGA
ATTGCATTCGCAAAATACTGCTAACCATACGATTAATCAGCTAATTTCCC
ACGGTAACTCTCCAACTCCGTTGGCATTTACTCCTACTTCAGTTTTAAGA
AAAATGACAGCCGATAAGGATACGCAATCACCAAGCACTTATTGTCAGAA
CCCACAATATCATGTACACCAACAAAATGCCAAGCAAGTCGGTACTCGTG
AGAACGTACTTGAGCCACAGCTGACCGCAACAATGGCTGTACAGCCCCGA
ATGATATTAGGCGGTGGAAACTTTGCCATTGGCCAAAACAATCAACATTT
GTCTCCCAACATGTCACAAAGTCGTAATCAACAAGTGTTAAAGTGGACTT
CTGGCAATATGCAAATGGTCCACGGAAAAACATTTGGCCGACCTATTCTG
AAAGGAGGTCTTAATTCAATGCCGCATTCCAATTCTGCACTTCCTTTTAC
TGCCCATAAAATTGAAATGCAACCCATTCATCAACCACATCTACAGCAGC
AGCAACATAGATTTAAAGCAGTTCAATCTGTGGAATCAAATCTGAATACC
GAAAGTGTTCACCAAAACATTACATCTCCTGTTGGATGGCACCAACTTTA
CATGCAACATCAGCAACAACATCATCACACACGACAGCAGCTTAGTCAAA
GAGTGATTTATGGAGAAATGCACCGTCAATCAAATCCACAAATGTCTCCG
CCAGTCCCAGGTTTTTCTGACAGCTCCGATTCCGGTAATGTGATCAAAGC
AAACAGCCTCACATCTCCTAGCTACCAGAGAGATGAGAGGATTTCATCAC
CAACCAATCAATTGGCGCAATGGTTTTCCCCTGAGCTTCTTGCAAAAGCC
TCTGCTGGAAAACTGCCACTTTTAAATGTGAACCAAGCACTCAGTTTGGA
AGAATTTGAACGAAGCATTCAACATTCCTCAGGCGTCGTGCATAACGCAA
GCTTTCTAGACCAT
BO05458.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:27:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4E-T-RG | 3033 | CG32016-PG | 1..3030 | 17..3046 | 15150 | 100 | Plus |
| 4E-T-RC | 3033 | CG32016-PC | 1..3030 | 17..3046 | 15150 | 100 | Plus |
| 4E-T-RB | 3033 | CG32016-PB | 1..3030 | 17..3046 | 15150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:27:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4E-T-RG | 3526 | CG32016-RG | 197..3226 | 17..3046 | 15150 | 100 | Plus |
| 4E-T-RC | 3691 | CG32016-RC | 362..3391 | 17..3046 | 15150 | 100 | Plus |
| 4E-T-RB | 3501 | CG32016-RB | 172..3201 | 17..3046 | 15150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:27:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 956545..957891 | 1387..41 | 6735 | 100 | Minus |
| 4 | 1348131 | 4 | 953512..953901 | 2487..2098 | 1950 | 100 | Minus |
| 4 | 1348131 | 4 | 954488..954864 | 1893..1517 | 1885 | 100 | Minus |
| 4 | 1348131 | 4 | 952136..952462 | 2812..2486 | 1635 | 100 | Minus |
| 4 | 1348131 | 4 | 951842..952079 | 3046..2809 | 1190 | 100 | Minus |
| 4 | 1348131 | 4 | 954020..954226 | 2099..1893 | 1035 | 100 | Minus |
| 4 | 1348131 | 4 | 954917..955051 | 1521..1387 | 675 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 00:27:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6761..6923 | 2579..2738 | 130 | 57.3 | Plus |
| Dvir\Tv1 | 6868 | Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). | 318..370 | 2595..2647 | 130 | 71.7 | Plus |
| Dvir\Tv1 | 6868 | Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). | 6733..6785 | 2595..2647 | 130 | 71.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2511..2722 | 2579..2787 | 129 | 57.8 | Plus |
BO05458.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:42:49 Download gff for
BO05458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32016-RC | 323..3361 | 10..3053 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:24:46 Download gff for
BO05458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32016-RB | 172..3201 | 17..3048 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:59:56 Download gff for
BO05458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32016-RC | 327..3356 | 17..3048 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:32:04 Download gff for
BO05458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4E-T-RB | 172..3201 | 17..3048 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:32:04 Download gff for
BO05458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 951840..952077 | 2811..3048 | 99 | <- | Minus |
| 4 | 952138..952461 | 2487..2810 | 100 | <- | Minus |
| 4 | 953513..953899 | 2100..2486 | 100 | <- | Minus |
| 4 | 954020..954226 | 1893..2099 | 100 | <- | Minus |
| 4 | 954489..954863 | 1518..1892 | 100 | <- | Minus |
| 4 | 954921..955050 | 1388..1517 | 100 | <- | Minus |
| 4 | 956545..957889 | 43..1387 | 100 | <- | Minus |
| 4 | 958006..958031 | 17..42 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:24:46 Download gff for
BO05458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 972466..972703 | 2811..3048 | 99 | <- | Minus |
| arm_4 | 972764..973087 | 2487..2810 | 100 | <- | Minus |
| arm_4 | 974139..974525 | 2100..2486 | 100 | <- | Minus |
| arm_4 | 974646..974852 | 1893..2099 | 100 | <- | Minus |
| arm_4 | 975115..975489 | 1518..1892 | 100 | <- | Minus |
| arm_4 | 975547..975676 | 1388..1517 | 100 | <- | Minus |
| arm_4 | 977171..978515 | 43..1387 | 100 | <- | Minus |
| arm_4 | 978632..978657 | 17..42 | 100 | | Minus |
BO05458.pep Sequence
Translation from 16 to 3064
> BO05458.pep
MDTSKISARYSKVDLLALRYEGKSRQRPQCSTRLELQTLGFWKINLNTAA
LTVSSAYSNQNKNRLSPEADNSSLICSNSSSISSRRAMRNRERANNYYQR
FVPTDSLLISGEDKDKDALSHGQPYKLNIIDHRSISSSHLMPAFAKRRFV
ISKGSNSEESNEGINTCASKGKAASSPSRKGSELDTAETCLNFVQPDHDQ
CMSSSPTFSTSRQERRIGSGRLLPRSDNWDYKNEKTVEASIENEKETSPN
GSGSTSSLNQHNQSQHRSRTFSGRLVERVPEVTDRRFQYDSKKSFDRQGI
NNRRISGKEPFSTQSRSKRGNSYLIHEEPEWFSAGPKSQLETIDLHGFED
LEKNEERSVTEDKNNQIQQLDKNLDAQASKDEASMRNSNDSLNFREVIPS
DEKKHTDENVVTSIQNSTDLGHPNKNKPIQMQPSQNPESEFNFDAFLNMH
PLDNSVLSNDETGKSDSKGTSRFSRWFRQKEAANNNEFPGFRESHAQEKR
GIPSVKDLEAQMIKVDMRTDLINPIAGSLCQTVQMEKPIARDTEAFKKLL
QQLGSQARQHHPCNDDCRTINLSNIANHVHLESKLHQKINDGHLQQPELS
VNVPTMPTSSHVFLQKRLEIQHLIQRLHCGDVSHDFLEKELDNPSTPAAT
KDVIATVLNEYSHSKRNPVVTGDPNIFTQQSFLQPQSVHQHYSQELHSQN
TANHTINQLISHGNSPTPLAFTPTSVLRKMTADKDTQSPSTYCQNPQYHV
HQQNAKQVGTRENVLEPQLTATMAVQPRMILGGGNFAIGQNNQHLSPNMS
QSRNQQVLKWTSGNMQMVHGKTFGRPILKGGLNSMPHSNSALPFTAHKIE
MQPIHQPHLQQQQHRFKAVQSVESNLNTESVHQNITSPVGWHQLYMQHQQ
QHHHTRQQLSQRVIYGEMHRQSNPQMSPPVPGFSDSSDSGNVIKANSLTS
PSYQRDERISSPTNQLAQWFSPELLAKASAGKLPLLNVNQALSLEEFERS
IQHSSGVVHNASFLDH
BO05458.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 03:05:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4E-T-PG | 1010 | CG32016-PG | 1..1010 | 1..1010 | 5278 | 100 | Plus |
| 4E-T-PC | 1010 | CG32016-PC | 1..1010 | 1..1010 | 5278 | 100 | Plus |
| 4E-T-PB | 1010 | CG32016-PB | 1..1010 | 1..1010 | 5278 | 100 | Plus |
| 4E-T-PH | 979 | CG32016-PH | 1..979 | 1..1010 | 5071 | 96.9 | Plus |
| cup-PC | 1117 | CG11181-PC | 424..1079 | 195..908 | 185 | 20.9 | Plus |
