Clone Sequence Records
BO05480.3prime Sequence
888 bp (828 high quality bases) assembled on 2005-12-02
> BO05480.3prime
ATGGTCTAGAAAGCTTGCAAAATCCAAAAGGGGCACTTCAGCATTATGGG
CAGGGACATCTTGTTCGTGAAGCTTTTGCTCTTCAATAATCTTAACCTCT
TCTGCTAGGCCCTTTCCCTTAAGCTTGACCACTTCTTCCGCATTGATCTG
ACCATTAGGTGTTGGGACACATTCATTTGATGGTGCTACCCCTTCCCCGC
CCATCAAAGTAGAATTCCGAGCTTTTAATACAGCCGGCGATGACTTAGCC
GTGCCATCTTTGGATTGCGGTGTCAATGGCTTGGAAGCAGCTTTGCCTGG
TGCTGCCTTTAATGGTGATGACTTCCTAAGAGAGGACGTAGTTGTAGTAG
AGGAGCTTCCAGGAACCAGCAAACGACGAGATGTACTCCCATTGTTATAG
GTTAAGCTAGCTGAATGCGTAAACTTTGGAGCTGAGCGAGCTGTGAAAGA
TTTTGTGATAGTTGCGGTAGCAGTGGAAGTGGTGGTAGAGCTGGTATTCT
TGCCCAATCCATTGGATTGCTGCTTGTTAGGGCTACGAGTAGAAAATGAA
GGGGTACTTGTGCTAGGCACCTTTCGCACAGTGGTGGTGGAGGAAATGGT
GCTGCGCGGCGACAAAACTTTAGGCTTGACTGGGGCTGTCATTGTGGCCG
CAGGGCGAACTTTTGTTGAAGCAGCGCTGCCAGGAGCAGATCCTTTTGCA
TTTGTAACTGGTCGTCGAGCAGTTGAGGAGGCTACAGATCCTGTTCCACT
TGTTGCTGGTCTGCGAGCGTTGGTACTGACCAAAGGGCGAAGTGTTGTCC
TGGTTACATTATCAGATGCAGTACCACTTGCAGTCGGCTTGTTAGTTATG
GTCTTGGCCCCTAAAGTTACCTTGCTCACTGGAGCTGT
BO05480.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:22:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1483-PA | 3492 | Map205-RA | 2620..3489 | 888..19 | 4350 | 100 | Minus |
| CG1483-PB | 3558 | Map205-RB | 2686..3555 | 888..19 | 4350 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:19:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Map205-RC | 5818 | CG1483-RC | 2903..3772 | 888..19 | 4350 | 100 | Minus |
| Map205-RB | 4733 | CG1483-RB | 3131..4000 | 888..19 | 4350 | 100 | Minus |
| Map205-RA | 4243 | CG1483-RA | 3065..3934 | 888..19 | 4350 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:19:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 32057325..32058194 | 19..888 | 4350 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 01:19:47 has no hits.
BO05480.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:23:12 Download gff for
BO05480.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1483-PB | 2686..3558 | 15..888 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:45:25 Download gff for
BO05480.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1483-PB | 2686..3558 | 15..888 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:41:12 Download gff for
BO05480.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Map205-RA | 3065..3937 | 15..888 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:31:49 Download gff for
BO05480.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Map205-RA | 3065..3937 | 15..888 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:31:49 Download gff for
BO05480.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 32057319..32058194 | 14..888 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:41:12 Download gff for
BO05480.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27883041..27883916 | 14..888 | 99 | | Plus |
BO05480.5prime Sequence
877 bp (793 high quality bases) assembled on 2005-12-02
> BO05480.5prime
GAAGTTATCAGTCGACATGGAACACCACGAGGACAACGCGCAGTTGGACA
ACTACTTGCAGAACCGCCTGGCCGAAAGTCTGCAAATTTGCGGAGGCGCC
GGCGAGCATAATCCTCATCTGGCAGACGCTACTGGGGGGAACGGCTGCGC
TCCTGGCATTGCGCCCTCAAAGTCGGACGAAGTCGACGGGGAAGAAGACG
AGGAGTGGAAGTACATACACGAGGTGCGGCAGAGTGAAAAGCTTCAACAG
GAAAAGCTTCCACTGACAAAGGAAACCGGCAATGGCTTCGGGCCCGGACG
GGACTCAGATAATCAAGTTCACGGAAACGGAGCTGCCGCTGTCTTCAATC
TGTACGAAGAGGACGTGGAAGTGATCAAGAACGATGGTGACTTCTCGACA
AATTCTAACACCACTACTTCAACGGACGAGGTAGTTGCCAGGCAGGCCCA
GGAGCCAAACCAGTTGCCGGAGCAGCTTCAACAGCAGCAGCAGATAGAAT
CACAAGGTGTTCACGAGGATCCCCGTCAGGAAGATGAGGATGAGCACAGC
TCCGTGGCCACTACTTATGGAACAAGCAGTCTCAGTGAGAACAACTCCTC
GCCTTTAGATCAGGAGGAGGTCGTTATGGTGGCCCAAACGGTTGGTCAAG
AGCAGTTAGTGGACTTCGACAACAAGGAAAACTCCTATTTTGTTAAAAAC
CTGGAAGAAAACCACTCGCAGCTAAACCCCAATGCTGTGGCCTTTGTGCC
TGGCGTTGGCTCACAATCATCCTCTCCCCTTCCTGCTGCTGAAGATCCAC
TACCTGGTGTTCAGCCCCGCCCATTTCTACCGGGAGGGACCTTTGACGAT
TTGGTGGCGGAAAGTCCGCGGAAAGAA
BO05480.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:22:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1483-PA | 3492 | Map205-RA | 1..861 | 17..877 | 4280 | 99.8 | Plus |
| CG1483-PB | 3558 | Map205-RB | 1..861 | 17..877 | 4280 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:39:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Map205-RC | 5818 | CG1483-RC | 446..1306 | 17..877 | 4290 | 99.9 | Plus |
| Map205-RB | 4733 | CG1483-RB | 446..1306 | 17..877 | 4290 | 99.9 | Plus |
| Map205-RA | 4243 | CG1483-RA | 446..1306 | 17..877 | 4290 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:39:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 32067136..32067996 | 877..17 | 4290 | 99.9 | Minus |
Blast to na_te.dros performed 2015-02-12 06:39:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6915 | 442..618 | 161 | 58.8 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1049..1187 | 450..586 | 156 | 62.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2262..2357 | 396..493 | 143 | 62.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6824 | 448..550 | 138 | 62.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2332..2523 | 407..598 | 130 | 54.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2327..2389 | 442..504 | 126 | 66.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1038..1138 | 397..493 | 126 | 64.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6862 | 442..547 | 124 | 59.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6925 | 449..597 | 116 | 55.6 | Plus |
| gypsy8 | 4955 | gypsy8 GYPSY8 4955bp | 4386..4451 | 434..499 | 114 | 63.6 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1094..1158 | 440..504 | 109 | 63.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6812..6856 | 449..493 | 108 | 71.1 | Plus |
BO05480.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:23:13 Download gff for
BO05480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1483-PB | 1..859 | 17..875 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:45:26 Download gff for
BO05480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1483-PB | 1..859 | 17..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:29:10 Download gff for
BO05480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Map205-RA | 443..1306 | 10..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:06:26 Download gff for
BO05480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Map205-RA | 443..1306 | 10..877 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:06:26 Download gff for
BO05480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 32067136..32067999 | 10..877 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:29:10 Download gff for
BO05480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27892858..27893721 | 10..877 | 99 | | Minus |
BO05480.complete Sequence
3523 bp assembled on 2008-08-14
GenBank Submission: FJ630058
> BO05480.complete
GAAGTTATCAGTCGACATGGAACACCACGAGGACAACGCGCAGTTGGACA
ACTACTTGCAGAACCGCCTGGCCGAAAGTCTGCAAATTTGCGGAGGCGCC
GGCGAGCATAATCCTCATCTGGCAGACGCTACTGGGGGGAACGGCTGCGC
TCCTGGCATTGCGCCCTCAAAGTCGGACGAAGTCGACGGGGAAGAAGACG
AGGAGTGGAAGTACATACACGAGGTGCGGCAGAGTGAAAAGCTTCAACAG
GAAAAGCTTCCACTGACAAAGGAAACCGGCAATGGCTTCGGGCCCGGACG
GGACTCAGATAATCAAGTTCACGGAAACGGAGCTGCCGCTGTCTTCAATC
TGTACGAAGAGGACGTGGAAGTGATCAAGAACGATGGTGACTTCTCGACA
AATTCTAACACCACTACTTCAACGGACGAGGTAGTTGCCAGGCAGGCCCA
GGAGCCAAACCAGTTGCCGGAGCAGCTTCAACAGCAGCAGCAGATAGAAT
CACAAGGTGTTCACGAGGATCCCCGTCAGGAAGATGAGGATGAGCACAGC
TCCGTGGCCACTACTTATGGAACAAGCAGTCTCAGTGAGAACAACTCCTC
GCCTTTAGATCAGGAGGAGGTCGTTATGGTGGCCCAAACGGTTGGTCAAG
AGCAGTTAGTGGACTTCGACAACAAGGAAAACTCCTATTTTGTTAAAAAC
CTGGAAGAAAACCACTCGCAGCTAAACCCCAATGCTGTGGCCTTTGTGCC
TGGCGTTGGCTCACAATCATCCTCTCCCCTTCCTGCTGCTGAAGATCCAC
TACCTGGTGTTCAGCCCCGCCCATTTCTACCGGGAGGGACCCTTGACGAT
TTGGTGGCGGAAAGTCCGCGGAAAGAATTCGCCCGAATCAACATGGATGG
TATTGCCGTGCCCGACGAGCGGGAATTTGACATTGAAGCGGATATGCGAC
CCCACGAGTTGGAGCAGGAATCGGACACTTTTGGGGCAGGACACCTGGAG
ATGCAGTTGTTGAACGGTATAGGAACCGCTGACCAAGCAGCCTTAAGGGA
TGTTCTGGATCACGGTCCAGAGACAAGTGTCGATATGGAGTTGCCACTAG
ATCAGGTGCCCAACGACGCCGACATCATGAAACAATCGATTTATGCCGAG
CACAACTCCTCCATTGAAGATATCTTAAATTCCGTGCAACCTTTGCCAAT
TCAGACTTGTGACGATAAGGAACTAATTCATGTGGAAGAGAAAGAACATG
TCTCGAAGTCGCCTTCTACAGAGGAGCTCCAGTTTCAGTCCGACTTCCCA
AACAATCAGGAATCGCACACATTATTCAATAACACTGAGCAGGATCCAAT
GCAGGCTTCATTTTATTTGGAACATACCTCTCAAAAGGCTCAAGAGGGCT
GCCAGGAGCAAATGCAGCTTCCCGCTGAGTGCTCTGATATTTTTGCCGAC
CAGAGTTTATTGCTAGACACCAGTGCACCCCAGTTGAGCTCCGAAGCAGA
CTCGCCTGTGGCGAAATTGGAGCTGGAATCCCAGCAAGCTGGCATTGTAG
ACATCACACCTTCGCCCCTTTCTTCCACTGCAGAGAAACATCTGGTTGAA
GACACCAAGGAGCTAGTTGAGGAGTACACGTTGGATCCGGAATCCCATTT
CTTTGGGGTTGTTTCATCTCAAGCTCCTCTACAGAACGACGAGGAAAATG
CTGTTTTTGAATCAGTTTCTGGTTATGAAACTCAAAACTTTGATGAAATA
TCATCTCCACCGGAAGGTATTAATCCGTTTGCCCAGCCCTTCACGCCCGC
CCACCTGGTGATAGAGCAGGCGAATACAATGATGGAGGATGTGGGAGGTA
TGCCTATACCAGCTTCCGAGGACTTTGCTATATGTGATAAAGTTGCTAGT
AAGTCTTCAAATGAAGTAGAGGATCATAGGAGTGAGCAACAAGCCTTTGT
AAAGGAGGAGCTGCTGCACCCTGTTGGAGATGTTGTTGCCCAGGTTGAAA
ATCTTGGCACTGAAAAGAACTTCGTTGTTGAAGAAGAGCGACTTCCTATT
TCTGTTTCAGATGAGATACCGCTTTCTTCGGCTTCAAAGGAGAAACTGTT
GCCTGATACTACAGATGAGCAACTGCTGACTTCTGCTTTGGAGGAGAAAC
TGCGCTCTGTTGCTCCAGAGGAGTCAGTGTCAACTGCTGCCGATGGGCAG
TCAATTTCTCAGTTTGATGAATATGTTATCGCAAGTAATAAACCTTTGGA
AGATATTTTAGAACCGGAAAAAGATGTCGAAGTTGCGAAAAGTTTGTCTG
AAAAAACTTCTGTTGCTACAGTGGCTGGAGGTGCTGTGGTTGGTGCTACC
AAAACCCACTCAGCCACCAAAGCAGGATCTACAGCAGCTAGTGCAAAATC
GAAAACAGAAACCCTTGTAATGAAGAAGACTACAGCGAGTTCTACTTCTG
TTTACGGGGCAAACAAGTCGGCCGCTCCACGTCCAAGTACCGCCCGCCTT
GGAATCAAAAGTACCAGTATAGCTACAAAAACTTCGACTACATCTTCACT
AACTGGAAATCCCCGAAAGTCACTAAGCAGTAATGTAGGATCAACAGTTA
AACCACCAACCAAGTTAAGCGGCACACGACCAGCTACAGCTCCAGTGAGC
AAGGTAACTTTAGGGGCCAAGACCATAACTAACAAGCCGACTGCAAGTGG
TACTGCATCTGATAATGTAACCAGGACAACACTTCGCCCTTTGGTCAGTA
CCAACGCTCGCAGACCAGCAACAAGTGGAACAGGATCTGTAGCCTCCTCA
ACTGCTCGACGACCAGTTACAAATGCAAAAGGATCTGCTCCTGGCAGCGC
TGCTTCAACAAAAGTTCGCCCTGCGGCCACAATGACAGCCCCAGTCAAGC
CTAAAGTTTTGTCGCCGCGCAGCACCATTTCCTCCACCACCACTGTGCGA
AAGGTGCCTAGCACAAGTACCCCTTCATTTTCTACTCGTAGCCCTAACAA
GCAGCAATCCAATGGATTGGGCAAGAATACCAGCTCTACCACCACTTCCA
CTGCTACCGCAACTATCACAAAATCTTTCACAGCTCGCTCAGCTCCAAAG
TTTACGCATTCAGCTAGCTTAACCTATAACAATGGGAGTACATCTCGTCG
TTTGCTGGTTCCTGGAAGCTCCTCTACTACAACTACGTCCTCTCTTAGGA
AGTCATCACCATTAAAGGCAGCACCAGGCAAAGCTGCTTCCAAGCCATTG
ACACCGCAATCCAAAGATGGCACGGCTAAGTCATCGCCGGCTGTATTAAA
AGCTCGGAATTCTACTTTGATGGGCGGGGAAGGGGTAGCACCATCAAATG
AATGTGTCCCAACACCTAATGGTCAGATCAATGCGGAAGAAGTGGTCAAG
CTTAAGGGAAAGGGCCTAGCAGAAGAGGTTAAGATTATTGAAGAGCAAAA
GCTTCACGAACAAGATGTCCCTGCCCATAATGCTGAAGTGCCCCTTTTGG
ATTTTGCAAGCTTTCTAGACCAT
BO05480.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:48:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Map205-RA | 3492 | CG1483-PA | 1..3489 | 17..3505 | 17445 | 100 | Plus |
| Map205-RC | 3330 | CG1483-PC | 1..1882 | 17..1898 | 9410 | 100 | Plus |
| Map205-RB | 3558 | CG1483-PB | 1735..3555 | 1685..3505 | 9105 | 100 | Plus |
| Map205-RC | 3330 | CG1483-PC | 1883..3327 | 2061..3505 | 7225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:48:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Map205-RA | 4243 | CG1483-RA | 446..3934 | 17..3505 | 17445 | 100 | Plus |
| Map205-RC | 5818 | CG1483-RC | 446..2327 | 17..1898 | 9410 | 100 | Plus |
| Map205-RB | 4733 | CG1483-RB | 2180..4000 | 1685..3505 | 9105 | 100 | Plus |
| Map205-RC | 5818 | CG1483-RC | 2328..3772 | 2061..3505 | 7225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:48:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 32057325..32059148 | 3505..1682 | 9120 | 100 | Minus |
| 3R | 32079331 | 3R | 32066329..32067996 | 1684..17 | 8340 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 14:48:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6915 | 442..618 | 161 | 58.8 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1049..1187 | 450..586 | 156 | 62.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2262..2357 | 396..493 | 143 | 62.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6824 | 448..550 | 138 | 62.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2327..2389 | 442..504 | 126 | 66.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1038..1138 | 397..493 | 126 | 64.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6862 | 442..547 | 124 | 59.8 | Plus |
BO05480.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:40:49 Download gff for
BO05480.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Map205-RA | 442..3936 | 10..3509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:52:06 Download gff for
BO05480.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Map205-RA | 446..3934 | 17..3507 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:00:29 Download gff for
BO05480.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Map205-RA | 445..3933 | 17..3507 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:18:54 Download gff for
BO05480.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Map205-RA | 446..3934 | 17..3507 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:18:54 Download gff for
BO05480.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 32057323..32059145 | 1685..3507 | 99 | <- | Minus |
| 3R | 32066329..32067996 | 17..1684 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:52:06 Download gff for
BO05480.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27883045..27884867 | 1685..3507 | 99 | <- | Minus |
| arm_3R | 27892051..27893718 | 17..1684 | 100 | | Minus |
BO05480.pep Sequence
Translation from 16 to 3523
> BO05480.pep
MEHHEDNAQLDNYLQNRLAESLQICGGAGEHNPHLADATGGNGCAPGIAP
SKSDEVDGEEDEEWKYIHEVRQSEKLQQEKLPLTKETGNGFGPGRDSDNQ
VHGNGAAAVFNLYEEDVEVIKNDGDFSTNSNTTTSTDEVVARQAQEPNQL
PEQLQQQQQIESQGVHEDPRQEDEDEHSSVATTYGTSSLSENNSSPLDQE
EVVMVAQTVGQEQLVDFDNKENSYFVKNLEENHSQLNPNAVAFVPGVGSQ
SSSPLPAAEDPLPGVQPRPFLPGGTLDDLVAESPRKEFARINMDGIAVPD
EREFDIEADMRPHELEQESDTFGAGHLEMQLLNGIGTADQAALRDVLDHG
PETSVDMELPLDQVPNDADIMKQSIYAEHNSSIEDILNSVQPLPIQTCDD
KELIHVEEKEHVSKSPSTEELQFQSDFPNNQESHTLFNNTEQDPMQASFY
LEHTSQKAQEGCQEQMQLPAECSDIFADQSLLLDTSAPQLSSEADSPVAK
LELESQQAGIVDITPSPLSSTAEKHLVEDTKELVEEYTLDPESHFFGVVS
SQAPLQNDEENAVFESVSGYETQNFDEISSPPEGINPFAQPFTPAHLVIE
QANTMMEDVGGMPIPASEDFAICDKVASKSSNEVEDHRSEQQAFVKEELL
HPVGDVVAQVENLGTEKNFVVEEERLPISVSDEIPLSSASKEKLLPDTTD
EQLLTSALEEKLRSVAPEESVSTAADGQSISQFDEYVIASNKPLEDILEP
EKDVEVAKSLSEKTSVATVAGGAVVGATKTHSATKAGSTAASAKSKTETL
VMKKTTASSTSVYGANKSAAPRPSTARLGIKSTSIATKTSTTSSLTGNPR
KSLSSNVGSTVKPPTKLSGTRPATAPVSKVTLGAKTITNKPTASGTASDN
VTRTTLRPLVSTNARRPATSGTGSVASSTARRPVTNAKGSAPGSAASTKV
RPAATMTAPVKPKVLSPRSTISSTTTVRKVPSTSTPSFSTRSPNKQQSNG
LGKNTSSTTTSTATATITKSFTARSAPKFTHSASLTYNNGSTSRRLLVPG
SSSTTTTSSLRKSSPLKAAPGKAASKPLTPQSKDGTAKSSPAVLKARNST
LMGGEGVAPSNECVPTPNGQINAEEVVKLKGKGLAEEVKIIEEQKLHEQD
VPAHNAEVPLLDFASFLDH
BO05480.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:46:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Map205-PA | 1163 | CG1483-PA | 1..1163 | 1..1163 | 5888 | 100 | Plus |
| Map205-PB | 1185 | CG1483-PB | 1..1185 | 1..1163 | 5855 | 98.1 | Plus |
| Map205-PC | 1109 | CG1483-PC | 1..1109 | 1..1163 | 5544 | 95.3 | Plus |
| Muc68D-PB | 1514 | CG6004-PB | 150..1138 | 111..1089 | 265 | 20 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 290..618 | 777..1106 | 251 | 26.5 | Plus |
| Muc68D-PB | 1514 | CG6004-PB | 62..1037 | 173..1120 | 241 | 19.8 | Plus |
| Muc68D-PB | 1514 | CG6004-PB | 309..1255 | 127..1124 | 222 | 19.3 | Plus |
