Clone BO05491 Report

Search the DGRC for BO05491

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:54
Well:91
Vector:pDNR-Dual
Associated Gene/Transcriptklg-RA
Protein status:BO05491.pep: Imported from assembly
Sequenced Size:1669

Clone Sequence Records

BO05491.5prime Sequence

292 bp (235 high quality bases) assembled on 2005-12-02

> BO05491.5prime
GAAGTTATCAGTCGACATGAATATAATTTCGCGCAGCATACGTACAGGCG
CCTTGGCCCCGCCCATCACTGCCCACGCCTCCGCCAACGCCAACGCCAGC
GGGCTCAGGAAAAGCAGCCAGCGACGCAACCGTGCTCCGCTTCAAATGAA
TTGCCCCATTCTGATTGTAATTAGCCTCGGATGGCTGCTGCACGCGCACG
CCGGAAGCGGCGGGTTCGCCGTCGAGGCCGCCATTTCAAATCGAGGCAGC
AACAGCCGCTCGATGAGCAACGTGCAACAGTCGGCGGTGGCC

BO05491.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:22:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG6669-PA 1638 klg-RA 1..276 17..292 1380 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:14:45
Subject Length Description Subject Range Query Range Score Percent Strand
klg-RA 4052 CG6669-RA 785..1060 17..292 1380 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:14:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22915408..22915637 17..246 1150 100 Plus
3R 32079331 3R 22948675..22948723 244..292 245 100 Plus
Blast to na_te.dros performed on 2015-02-12 00:14:42 has no hits.

BO05491.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:23:30 Download gff for BO05491.5prime
Subject Subject Range Query Range Percent Splice Strand
klg-PA 1..276 17..292 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:45:52 Download gff for BO05491.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6669-PA 1..276 17..292 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:38:49 Download gff for BO05491.5prime
Subject Subject Range Query Range Percent Splice Strand
klg-RA 785..1060 17..292 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:59:25 Download gff for BO05491.5prime
Subject Subject Range Query Range Percent Splice Strand
klg-RA 785..1060 17..292 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:59:25 Download gff for BO05491.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 22915408..22915636 17..245 100 -> Plus
3R 22948677..22948723 246..292 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:38:49 Download gff for BO05491.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18741130..18741358 17..245 100 -> Plus
arm_3R 18774399..18774445 246..292 100   Plus

BO05491.3prime Sequence

320 bp (282 high quality bases) assembled on 2005-12-02

> BO05491.3prime
ATGGTCTAGAAAGCTTGCTCCCAGGCCAAGGCGGCGTCTGTCGAACTGAC
AATTACTCAAGGCCAGGGCCAACAGAAGCGCCGTGTGAAGAACTGTGGAT
CCCGGCAGGCTGCCTATGGAGGCACTATTGCTGCGCGACTTGGAGCTGGC
CACCACCTCGGCGTCTTCGGGGCCAATGTCCTGGCTGTTGGTGGCGACGA
CAAATTGAAATATATCGCTAACCTCATTCCAGCCGTAGCGATTCTTGGCC
TGCACAATCGCCTCGTAGTAACCGCCCGGATGCAGATTCTTTATGGTGTA
GGACATGATGTGTGTAAGTG

BO05491.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:22:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG6669-PA 1638 klg-RA 1334..1635 320..19 1510 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 18:50:22
Subject Length Description Subject Range Query Range Score Percent Strand
klg-RA 4052 CG6669-RA 2118..2419 320..19 1510 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 18:50:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22959893..22960098 224..19 1030 100 Minus
3R 32079331 3R 22959626..22959725 320..221 500 100 Minus
Blast to na_te.dros performed on 2015-02-09 18:50:19 has no hits.

BO05491.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:23:29 Download gff for BO05491.3prime
Subject Subject Range Query Range Percent Splice Strand
klg-PA 1334..1638 15..320 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:45:50 Download gff for BO05491.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6669-PA 1334..1638 15..320 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:01:54 Download gff for BO05491.3prime
Subject Subject Range Query Range Percent Splice Strand
klg-RA 2118..2424 13..320 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:15:05 Download gff for BO05491.3prime
Subject Subject Range Query Range Percent Splice Strand
klg-RA 2118..2424 13..320 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:15:05 Download gff for BO05491.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 22959626..22959723 223..320 100 -> Minus
3R 22959895..22960103 13..222 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:01:54 Download gff for BO05491.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18785617..18785825 13..222 99   Minus
arm_3R 18785348..18785445 223..320 100 -> Minus

BO05491.complete Sequence

1669 bp assembled on 2010-02-24

GenBank Submission: KX794775

> BO05491.complete
GAAGTTATCAGTCGACATGAATATAATTTCGCGCAGCATACGTACAGGCG
CCTTGGCCCCGCCCATCACTGCCCACGCCTCCGCCAACGCCAACGCCAGC
GGGCTCAGGAAAAGCAGCCAGCGACGCAACCGTGCTCCGCTTCAAATGAA
TTGCCCCATTCTGATTGTAATTAGCCTCGGATGGCTGCTGCACGCGCACG
CCGGAAGCGGCGGGTTCGCCGTCGAGGCCGCCATTTCAAATCGAGGCAGC
AACAGCCGCTCGATGAGCAACGTGCAACAGTCGGCGGTGGCCGCCTCCAC
GCTGACCGCCACCCTGCCCCGTTTCCTCTCCAGAGGACACACCTACCGCG
CCGTCGTCGGGGACACGCTGGTCCTGCCCTGCCAGGTGGAGAATCTGGGC
AATTTCGTCCTTCTGTGGCGACGGGGAACAAATGTGCTCACTGCCTCCAA
CATTATGGTTACAAGGGATGAGCGCGTAAGACTGATAGATGGTTATAATT
TAGAGATATCCGATTTGGAGCCTCAAGACGCCGGGGATTATGTTTGTCAA
ATCAGTGACAAAATAAATCGTGATCAAGTGCACACAGTTGAGATATTGGT
TCCGCCCAGTGTACGGGCCATCCCAACATCCGGACAACTGCAGGCCCGCA
AAGGAGGACCCATTACGTTGGAGTGCAAGGGATCTGGTAATCCGGTGCCA
TCCATTTACTGGACCAAGAAGAGCGGCGCAAACAAGTCAACGGCCAGGAT
CGGAGACGGACCCATTTTGACACTGGAGAAGCTGGAGCGACAGCAGGCGG
GAGTCTACCAGTGCACCGCCGACAACGGAGTGGGTGACCCGGTCACAGTG
GATATGCGACTGGATGTGTTGTATCCCCCGGATATACAAGTGGAGAAATC
CTGGATACACTCGGGCGAAGGATTCGAGGCGAAGCTCGTTTGCATTGTTT
TCGCTGATCCAGTCGCAACGGTGTCCTGGTACCAAAACTCATTTCCGATC
CAATCGACGGACAGGCGCATCATGGCCACCAGAGCCAACCGGCACATGCT
CACCATCCGCCACATCCAGCAGGAGGACTTTGGCAACTACAGCTGCGTGG
CGGACAATTCGCTGGGACGGTCCCGCAAATACATGGAGCTCTCCGGACGC
CCCGGAGCCGCCGAGTTCTATTCGCCCAAGTGGGGTCGTTCGCCGGACAG
CTACAATCTGACCTGGAAAATCGATAGCTACCCGCCGCTGGAGGAGGTCC
GCCTACTTTATCGTCGAGTGCAGATGAATGAGACTTACCAGCAGCCGGGC
AGGTGGCACGACTTCATCCTCACCCCGGAGCACCGACCAGCCTCGGAGCC
ACTTACACACATCATGTCCTACACCATAAAGAATCTGCATCCGGGCGGTT
ACTACGAGGCGATTGTGCAGGCCAAGAATCGCTACGGCTGGAATGAGGTT
AGCGATATATTTCAATTTGTCGTCGCCACCAACAGCCAGGACATTGGCCC
CGAAGACGCCGAGGTGGTGGCCAGCTCCAAGTCGCGCAGCAATAGTGCCT
CCATAGGCAGCCTGCCGGGATCCACAGTTCTTCACACGGCGCTTCTGTTG
GCCCTGGCCTTGAGTAATTGTCAGTTCGACAGACGCCGCCTTGGCCTGGG
AGCAAGCTTTCTAGACCAT

BO05491.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:28:05
Subject Length Description Subject Range Query Range Score Percent Strand
klg-RA 1638 CG6669-PA 1..1635 17..1651 8175 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:28:06
Subject Length Description Subject Range Query Range Score Percent Strand
klg-RA 4052 CG6669-RA 785..2419 17..1651 8175 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:28:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22915408..22915637 17..246 1150 100 Plus
3R 32079331 3R 22959893..22960098 1446..1651 1030 100 Plus
3R 32079331 3R 22953000..22953201 398..599 1010 100 Plus
3R 32079331 3R 22958312..22958499 1090..1277 925 99.5 Plus
3R 32079331 3R 22959547..22959725 1271..1449 895 100 Plus
3R 32079331 3R 22948675..22948830 244..399 780 100 Plus
3R 32079331 3R 22955750..22955902 720..872 765 100 Plus
3R 32079331 3R 22957287..22957409 970..1092 615 100 Plus
3R 32079331 3R 22953346..22953468 599..721 615 100 Plus
3R 32079331 3R 22956590..22956689 873..972 500 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:28:04 has no hits.

BO05491.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-24 09:36:41 Download gff for BO05491.complete
Subject Subject Range Query Range Percent Splice Strand
klg-RA 767..2401 17..1653 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:53 Download gff for BO05491.complete
Subject Subject Range Query Range Percent Splice Strand
klg-RA 785..2419 17..1653 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:29 Download gff for BO05491.complete
Subject Subject Range Query Range Percent Splice Strand
klg-RA 785..2419 17..1653 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:29 Download gff for BO05491.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22959895..22960098 1448..1653 99   Plus
3R 22915408..22915636 17..245 100 -> Plus
3R 22948677..22948829 246..398 100 -> Plus
3R 22953001..22953201 399..599 100 -> Plus
3R 22953347..22953468 600..721 100 -> Plus
3R 22955752..22955902 722..872 100 -> Plus
3R 22956590..22956687 873..970 100 -> Plus
3R 22957288..22957409 971..1092 100 -> Plus
3R 22958315..22958495 1093..1273 100 -> Plus
3R 22959550..22959723 1274..1447 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:53 Download gff for BO05491.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18782312..18782409 873..970 100 -> Plus
arm_3R 18783010..18783131 971..1092 100 -> Plus
arm_3R 18774399..18774551 246..398 100 -> Plus
arm_3R 18741130..18741358 17..245 100 -> Plus
arm_3R 18778723..18778923 399..599 100 -> Plus
arm_3R 18779069..18779190 600..721 100 -> Plus
arm_3R 18781474..18781624 722..872 100 -> Plus
arm_3R 18784037..18784217 1093..1273 100 -> Plus
arm_3R 18785272..18785445 1274..1447 100 -> Plus
arm_3R 18785617..18785820 1448..1653 99   Plus

BO05491.pep Sequence

Translation from 16 to 1669

> BO05491.pep
MNIISRSIRTGALAPPITAHASANANASGLRKSSQRRNRAPLQMNCPILI
VISLGWLLHAHAGSGGFAVEAAISNRGSNSRSMSNVQQSAVAASTLTATL
PRFLSRGHTYRAVVGDTLVLPCQVENLGNFVLLWRRGTNVLTASNIMVTR
DERVRLIDGYNLEISDLEPQDAGDYVCQISDKINRDQVHTVEILVPPSVR
AIPTSGQLQARKGGPITLECKGSGNPVPSIYWTKKSGANKSTARIGDGPI
LTLEKLERQQAGVYQCTADNGVGDPVTVDMRLDVLYPPDIQVEKSWIHSG
EGFEAKLVCIVFADPVATVSWYQNSFPIQSTDRRIMATRANRHMLTIRHI
QQEDFGNYSCVADNSLGRSRKYMELSGRPGAAEFYSPKWGRSPDSYNLTW
KIDSYPPLEEVRLLYRRVQMNETYQQPGRWHDFILTPEHRPASEPLTHIM
SYTIKNLHPGGYYEAIVQAKNRYGWNEVSDIFQFVVATNSQDIGPEDAEV
VASSKSRSNSASIGSLPGSTVLHTALLLALALSNCQFDRRRLGLGASFLD
H

BO05491.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:22:22
Subject Length Description Subject Range Query Range Score Percent Strand
klg-PA 545 CG6669-PA 1..545 1..545 2840 100 Plus
CG7166-PC 467 CG7166-PC 37..420 99..484 1228 57.1 Plus
CG7166-PB 467 CG7166-PB 37..420 99..484 1228 57.1 Plus
CG34353-PB 566 CG34353-PB 73..403 88..418 825 44.4 Plus
CG34353-PA 566 CG34353-PA 73..403 88..418 825 44.4 Plus