Clone Sequence Records
BO05491.5prime Sequence
292 bp (235 high quality bases) assembled on 2005-12-02
> BO05491.5prime
GAAGTTATCAGTCGACATGAATATAATTTCGCGCAGCATACGTACAGGCG
CCTTGGCCCCGCCCATCACTGCCCACGCCTCCGCCAACGCCAACGCCAGC
GGGCTCAGGAAAAGCAGCCAGCGACGCAACCGTGCTCCGCTTCAAATGAA
TTGCCCCATTCTGATTGTAATTAGCCTCGGATGGCTGCTGCACGCGCACG
CCGGAAGCGGCGGGTTCGCCGTCGAGGCCGCCATTTCAAATCGAGGCAGC
AACAGCCGCTCGATGAGCAACGTGCAACAGTCGGCGGTGGCC
BO05491.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:22:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6669-PA | 1638 | klg-RA | 1..276 | 17..292 | 1380 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:14:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
klg-RA | 4052 | CG6669-RA | 785..1060 | 17..292 | 1380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:14:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22915408..22915637 | 17..246 | 1150 | 100 | Plus |
3R | 32079331 | 3R | 22948675..22948723 | 244..292 | 245 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 00:14:42 has no hits.
BO05491.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:23:30 Download gff for
BO05491.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
klg-PA | 1..276 | 17..292 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:45:52 Download gff for
BO05491.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6669-PA | 1..276 | 17..292 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:38:49 Download gff for
BO05491.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
klg-RA | 785..1060 | 17..292 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:59:25 Download gff for
BO05491.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
klg-RA | 785..1060 | 17..292 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:59:25 Download gff for
BO05491.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22915408..22915636 | 17..245 | 100 | -> | Plus |
3R | 22948677..22948723 | 246..292 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:38:49 Download gff for
BO05491.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18741130..18741358 | 17..245 | 100 | -> | Plus |
arm_3R | 18774399..18774445 | 246..292 | 100 | | Plus |
BO05491.3prime Sequence
320 bp (282 high quality bases) assembled on 2005-12-02
> BO05491.3prime
ATGGTCTAGAAAGCTTGCTCCCAGGCCAAGGCGGCGTCTGTCGAACTGAC
AATTACTCAAGGCCAGGGCCAACAGAAGCGCCGTGTGAAGAACTGTGGAT
CCCGGCAGGCTGCCTATGGAGGCACTATTGCTGCGCGACTTGGAGCTGGC
CACCACCTCGGCGTCTTCGGGGCCAATGTCCTGGCTGTTGGTGGCGACGA
CAAATTGAAATATATCGCTAACCTCATTCCAGCCGTAGCGATTCTTGGCC
TGCACAATCGCCTCGTAGTAACCGCCCGGATGCAGATTCTTTATGGTGTA
GGACATGATGTGTGTAAGTG
BO05491.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:22:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6669-PA | 1638 | klg-RA | 1334..1635 | 320..19 | 1510 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 18:50:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
klg-RA | 4052 | CG6669-RA | 2118..2419 | 320..19 | 1510 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 18:50:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22959893..22960098 | 224..19 | 1030 | 100 | Minus |
3R | 32079331 | 3R | 22959626..22959725 | 320..221 | 500 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 18:50:19 has no hits.
BO05491.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:23:29 Download gff for
BO05491.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
klg-PA | 1334..1638 | 15..320 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:45:50 Download gff for
BO05491.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6669-PA | 1334..1638 | 15..320 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:01:54 Download gff for
BO05491.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
klg-RA | 2118..2424 | 13..320 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:15:05 Download gff for
BO05491.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
klg-RA | 2118..2424 | 13..320 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:15:05 Download gff for
BO05491.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22959626..22959723 | 223..320 | 100 | -> | Minus |
3R | 22959895..22960103 | 13..222 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:01:54 Download gff for
BO05491.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18785617..18785825 | 13..222 | 99 | | Minus |
arm_3R | 18785348..18785445 | 223..320 | 100 | -> | Minus |
BO05491.complete Sequence
1669 bp assembled on 2010-02-24
GenBank Submission: KX794775
> BO05491.complete
GAAGTTATCAGTCGACATGAATATAATTTCGCGCAGCATACGTACAGGCG
CCTTGGCCCCGCCCATCACTGCCCACGCCTCCGCCAACGCCAACGCCAGC
GGGCTCAGGAAAAGCAGCCAGCGACGCAACCGTGCTCCGCTTCAAATGAA
TTGCCCCATTCTGATTGTAATTAGCCTCGGATGGCTGCTGCACGCGCACG
CCGGAAGCGGCGGGTTCGCCGTCGAGGCCGCCATTTCAAATCGAGGCAGC
AACAGCCGCTCGATGAGCAACGTGCAACAGTCGGCGGTGGCCGCCTCCAC
GCTGACCGCCACCCTGCCCCGTTTCCTCTCCAGAGGACACACCTACCGCG
CCGTCGTCGGGGACACGCTGGTCCTGCCCTGCCAGGTGGAGAATCTGGGC
AATTTCGTCCTTCTGTGGCGACGGGGAACAAATGTGCTCACTGCCTCCAA
CATTATGGTTACAAGGGATGAGCGCGTAAGACTGATAGATGGTTATAATT
TAGAGATATCCGATTTGGAGCCTCAAGACGCCGGGGATTATGTTTGTCAA
ATCAGTGACAAAATAAATCGTGATCAAGTGCACACAGTTGAGATATTGGT
TCCGCCCAGTGTACGGGCCATCCCAACATCCGGACAACTGCAGGCCCGCA
AAGGAGGACCCATTACGTTGGAGTGCAAGGGATCTGGTAATCCGGTGCCA
TCCATTTACTGGACCAAGAAGAGCGGCGCAAACAAGTCAACGGCCAGGAT
CGGAGACGGACCCATTTTGACACTGGAGAAGCTGGAGCGACAGCAGGCGG
GAGTCTACCAGTGCACCGCCGACAACGGAGTGGGTGACCCGGTCACAGTG
GATATGCGACTGGATGTGTTGTATCCCCCGGATATACAAGTGGAGAAATC
CTGGATACACTCGGGCGAAGGATTCGAGGCGAAGCTCGTTTGCATTGTTT
TCGCTGATCCAGTCGCAACGGTGTCCTGGTACCAAAACTCATTTCCGATC
CAATCGACGGACAGGCGCATCATGGCCACCAGAGCCAACCGGCACATGCT
CACCATCCGCCACATCCAGCAGGAGGACTTTGGCAACTACAGCTGCGTGG
CGGACAATTCGCTGGGACGGTCCCGCAAATACATGGAGCTCTCCGGACGC
CCCGGAGCCGCCGAGTTCTATTCGCCCAAGTGGGGTCGTTCGCCGGACAG
CTACAATCTGACCTGGAAAATCGATAGCTACCCGCCGCTGGAGGAGGTCC
GCCTACTTTATCGTCGAGTGCAGATGAATGAGACTTACCAGCAGCCGGGC
AGGTGGCACGACTTCATCCTCACCCCGGAGCACCGACCAGCCTCGGAGCC
ACTTACACACATCATGTCCTACACCATAAAGAATCTGCATCCGGGCGGTT
ACTACGAGGCGATTGTGCAGGCCAAGAATCGCTACGGCTGGAATGAGGTT
AGCGATATATTTCAATTTGTCGTCGCCACCAACAGCCAGGACATTGGCCC
CGAAGACGCCGAGGTGGTGGCCAGCTCCAAGTCGCGCAGCAATAGTGCCT
CCATAGGCAGCCTGCCGGGATCCACAGTTCTTCACACGGCGCTTCTGTTG
GCCCTGGCCTTGAGTAATTGTCAGTTCGACAGACGCCGCCTTGGCCTGGG
AGCAAGCTTTCTAGACCAT
BO05491.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:28:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
klg-RA | 1638 | CG6669-PA | 1..1635 | 17..1651 | 8175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:28:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
klg-RA | 4052 | CG6669-RA | 785..2419 | 17..1651 | 8175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:28:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22915408..22915637 | 17..246 | 1150 | 100 | Plus |
3R | 32079331 | 3R | 22959893..22960098 | 1446..1651 | 1030 | 100 | Plus |
3R | 32079331 | 3R | 22953000..22953201 | 398..599 | 1010 | 100 | Plus |
3R | 32079331 | 3R | 22958312..22958499 | 1090..1277 | 925 | 99.5 | Plus |
3R | 32079331 | 3R | 22959547..22959725 | 1271..1449 | 895 | 100 | Plus |
3R | 32079331 | 3R | 22948675..22948830 | 244..399 | 780 | 100 | Plus |
3R | 32079331 | 3R | 22955750..22955902 | 720..872 | 765 | 100 | Plus |
3R | 32079331 | 3R | 22957287..22957409 | 970..1092 | 615 | 100 | Plus |
3R | 32079331 | 3R | 22953346..22953468 | 599..721 | 615 | 100 | Plus |
3R | 32079331 | 3R | 22956590..22956689 | 873..972 | 500 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:28:04 has no hits.
BO05491.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-24 09:36:41 Download gff for
BO05491.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
klg-RA | 767..2401 | 17..1653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:53 Download gff for
BO05491.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
klg-RA | 785..2419 | 17..1653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:29 Download gff for
BO05491.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
klg-RA | 785..2419 | 17..1653 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:29 Download gff for
BO05491.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22959895..22960098 | 1448..1653 | 99 | | Plus |
3R | 22915408..22915636 | 17..245 | 100 | -> | Plus |
3R | 22948677..22948829 | 246..398 | 100 | -> | Plus |
3R | 22953001..22953201 | 399..599 | 100 | -> | Plus |
3R | 22953347..22953468 | 600..721 | 100 | -> | Plus |
3R | 22955752..22955902 | 722..872 | 100 | -> | Plus |
3R | 22956590..22956687 | 873..970 | 100 | -> | Plus |
3R | 22957288..22957409 | 971..1092 | 100 | -> | Plus |
3R | 22958315..22958495 | 1093..1273 | 100 | -> | Plus |
3R | 22959550..22959723 | 1274..1447 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:53 Download gff for
BO05491.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18782312..18782409 | 873..970 | 100 | -> | Plus |
arm_3R | 18783010..18783131 | 971..1092 | 100 | -> | Plus |
arm_3R | 18774399..18774551 | 246..398 | 100 | -> | Plus |
arm_3R | 18741130..18741358 | 17..245 | 100 | -> | Plus |
arm_3R | 18778723..18778923 | 399..599 | 100 | -> | Plus |
arm_3R | 18779069..18779190 | 600..721 | 100 | -> | Plus |
arm_3R | 18781474..18781624 | 722..872 | 100 | -> | Plus |
arm_3R | 18784037..18784217 | 1093..1273 | 100 | -> | Plus |
arm_3R | 18785272..18785445 | 1274..1447 | 100 | -> | Plus |
arm_3R | 18785617..18785820 | 1448..1653 | 99 | | Plus |
BO05491.pep Sequence
Translation from 16 to 1669
> BO05491.pep
MNIISRSIRTGALAPPITAHASANANASGLRKSSQRRNRAPLQMNCPILI
VISLGWLLHAHAGSGGFAVEAAISNRGSNSRSMSNVQQSAVAASTLTATL
PRFLSRGHTYRAVVGDTLVLPCQVENLGNFVLLWRRGTNVLTASNIMVTR
DERVRLIDGYNLEISDLEPQDAGDYVCQISDKINRDQVHTVEILVPPSVR
AIPTSGQLQARKGGPITLECKGSGNPVPSIYWTKKSGANKSTARIGDGPI
LTLEKLERQQAGVYQCTADNGVGDPVTVDMRLDVLYPPDIQVEKSWIHSG
EGFEAKLVCIVFADPVATVSWYQNSFPIQSTDRRIMATRANRHMLTIRHI
QQEDFGNYSCVADNSLGRSRKYMELSGRPGAAEFYSPKWGRSPDSYNLTW
KIDSYPPLEEVRLLYRRVQMNETYQQPGRWHDFILTPEHRPASEPLTHIM
SYTIKNLHPGGYYEAIVQAKNRYGWNEVSDIFQFVVATNSQDIGPEDAEV
VASSKSRSNSASIGSLPGSTVLHTALLLALALSNCQFDRRRLGLGASFLD
H
BO05491.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:22:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
klg-PA | 545 | CG6669-PA | 1..545 | 1..545 | 2840 | 100 | Plus |
CG7166-PC | 467 | CG7166-PC | 37..420 | 99..484 | 1228 | 57.1 | Plus |
CG7166-PB | 467 | CG7166-PB | 37..420 | 99..484 | 1228 | 57.1 | Plus |
CG34353-PB | 566 | CG34353-PB | 73..403 | 88..418 | 825 | 44.4 | Plus |
CG34353-PA | 566 | CG34353-PA | 73..403 | 88..418 | 825 | 44.4 | Plus |