Clone Sequence Records
BO05494.3prime Sequence
899 bp (843 high quality bases) assembled on 2005-12-02
> BO05494.3prime
ATGGTCTAGAAAGCTTGCCGGTTTCATGGTCCAGAAGTTCTTCTTGGGTT
TCGCGCCCGTGGACAGGGCCACGTTGCTGCTGCTGCTCATGCTCATGCTG
CCGCCGCCCATGCCGCCAACGGCCACGCCCACACCGGGTCCAACGCCCAC
GGCGGAGGCCATCGATCTGCCCGAAGCGCGCTGCTGGTCCGCCGAGCAGC
GGCGTGGATAGTTGAAGGGCGACAAGGAACCGGCGCCCACGACGCCGGAT
CCCTCGTGCATGGGCGTCATCATGCCGCCAACACCAACACCACCACCACC
ACCGCCGCCGCCGCCCACAGCCAAGGTCATGCCAATGCCCTGATCCTCGC
TGCAGCTGGCCATGCTGCTTTTCGATGTGGAAGTGCCCGAGGCCGTGGAG
GATCGACAGCTGCGCAGGTTGTGCGGCAACGTGTTGTTGTTCAGGCTGTG
ATGGTGCATCGCCTGTTGCTGCTGGTGGTTGTGATGGTGGTGCAGCGGTC
CGGTGGGCGTGGCGGACTTGTAGTACCGCAGACTCTCGTTGTAGCTGGCG
CCGCTGCTGCTGCCGCTGCCACTGAAGCCGGAGTCAAGGTCGCCCTCATC
GAACTCCGGATTAATGCAGCTACTGTGGCCATGATCCTTGAGCTCCATGC
TGTTCAGGGTGCTCGATAGGTTCTCCAGGCTGGCGTGCGAGGCGGAGCTC
GAGTTCGAGGTGCCCCCTGCACCAGCCGCACCGCCCAGGAGGCCGCCGCG
TCTGGGTCTCTGGGCGGTCTTCGTTGGTCCCGCCACCACGCTGGACACCG
CCGATCCACCCACTGCACCAGCGGACATCGAGGTGCTTGGCTCATCGGCG
CCCATGGCGTGACTGGGACTGACGTCCGGCGGTGTCGGCGGCATTATTA
BO05494.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:22:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32541-PA | 2208 | CG32541-RA | 1325..2205 | 899..19 | 4405 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:40:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43759-RC | 6340 | CG43759-RC | 2391..3271 | 899..19 | 4405 | 100 | Minus |
| CG43759-RD | 4396 | CG43759-RD | 2204..3084 | 899..19 | 4405 | 100 | Minus |
| CG43759-RB | 4583 | CG43759-RB | 2391..3271 | 899..19 | 4405 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:40:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19012465..19013345 | 899..19 | 4405 | 100 | Minus |
Blast to na_te.dros performed 2015-02-12 06:40:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6754..6916 | 499..347 | 151 | 60.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6879 | 584..432 | 146 | 59.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2333..2401 | 499..432 | 135 | 68.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6823 | 499..407 | 134 | 67.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6775..6860 | 499..418 | 132 | 66.7 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1054..1151 | 515..418 | 128 | 64 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1513..1585 | 519..449 | 125 | 67.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2823..2911 | 106..16 | 125 | 64.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2612..2679 | 499..432 | 124 | 64.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2368 | 493..432 | 123 | 68.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2475..2514 | 112..73 | 119 | 77.5 | Minus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 141..188 | 585..538 | 114 | 70.8 | Minus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9171..9218 | 585..538 | 114 | 70.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6767 | 116..73 | 112 | 72.7 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1102..1152 | 499..449 | 111 | 68.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2616..2646 | 103..73 | 110 | 83.9 | Minus |
BO05494.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:23:31 Download gff for
BO05494.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32541-PA | 1326..2208 | 16..898 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:45:53 Download gff for
BO05494.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32541-PA | 1326..2208 | 16..898 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:29:17 Download gff for
BO05494.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43759-RA | 2392..3278 | 12..898 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:09:00 Download gff for
BO05494.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43759-RB | 2392..3278 | 12..898 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:09:00 Download gff for
BO05494.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19012466..19013352 | 12..898 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:29:17 Download gff for
BO05494.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18906499..18907385 | 12..898 | 99 | | Minus |
BO05494.5prime Sequence
945 bp (766 high quality bases) assembled on 2005-12-02
> BO05494.5prime
GAAGTTATCAGTCGACATGTATCCGGCCAGCGGCAGTGGAGGAGGCAGTG
CAGCGACCGCTGCTAAGTTCCAGAATCGCTGCGGATCGCCGCAGTTTGCC
AGCGACTATCCGCATCCACATCCGCACCAGCATCCGCACCAGACGACATC
GGTGGCGGTGCACAGTGCCCCGCCCGGAGTGAGTGGTGGCTCCATAGCCA
GCGGTGGGTCCATGTCCATGCGTCACGGCCAGCGGGTGGTGGCCTCAGCC
CATCAGCATCCCAGTCAGATGACCCTGAACCACGGCGGTATGGGCCACAA
CCACAACCACGGCATGGGCATGGCCATGGGAATGGGTCACAATCATGGAC
ATGCAGCGGCCACCTTGGGCCATCCGCACTCGCATTCGCACAACAACAGC
AGCGGCAGCAGCAGCCACGGACATGTGGGCTCGCATCTGATCTTCCCCGA
CGACATGGACAGCATCGAGTTCTGCATGCCGGCGGCGCCCTCCTCCTCGT
CCGCCTCCTCGCAGAACGGTCTCGGCGACCAGTTGCTCTTGGGCAGCAGT
CACGGCGAGGCGTTCACGGAGCGCCGAAGGAGGGGTCACAGCCGGCGCAG
CAATCACAAGATGGACGTGGAACAGCAGGTTAAGTGGTCTCGCAAGAACA
TCGCCGCCACCATGGAACGCTTCGAGCCCACGCCCAACACACAGTCCTCG
TCGTCCACTTCATCGCTGGACTATGGATTTGCAGCCGGCGTGATGACACC
CAGTGGCAGCAGTGCTACGGCCTCGCATGGCGGTGGCGCCTCCAATCCCT
CACTGCACGTGGCCTTCAACGGAGGCGGCGGAGCAGTGGGCGGTGGCTCA
TCCGCGGCATCAGGCGCTAGTGGTGTCAGCGGCTCGGGAGCAGCTGCAGC
GGCGGCGCCCTTCAACCATGTCTATTCGTATGCTTACTACGAACC
BO05494.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:22:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32541-PA | 2208 | CG32541-RA | 1..929 | 17..945 | 4645 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:17:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43759-RC | 6340 | CG43759-RC | 1067..1995 | 17..945 | 4645 | 100 | Plus |
| CG43759-RD | 4396 | CG43759-RD | 880..1808 | 17..945 | 4645 | 100 | Plus |
| CG43759-RB | 4583 | CG43759-RB | 1067..1995 | 17..945 | 4645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:17:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19011073..19011686 | 17..630 | 3070 | 100 | Plus |
| X | 23542271 | X | 19011750..19012069 | 626..945 | 1600 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 00:17:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1100..1148 | 371..418 | 134 | 77.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2318..2369 | 370..420 | 131 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2357..2421 | 353..418 | 129 | 70.1 | Plus |
| TART-A | 13424 | TART-A 13424bp | 904..1026 | 378..497 | 119 | 61.6 | Plus |
| TART-A | 13424 | TART-A 13424bp | 12082..12204 | 378..497 | 119 | 61.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6705..6799 | 321..420 | 118 | 62 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1066..1105 | 382..420 | 116 | 80 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1523..1551 | 390..418 | 109 | 86.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2486..2514 | 390..418 | 109 | 86.2 | Plus |
BO05494.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:23:32 Download gff for
BO05494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32541-PA | 1..929 | 17..945 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:45:55 Download gff for
BO05494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32541-PA | 1..929 | 17..945 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:38:51 Download gff for
BO05494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43759-RA | 1063..1995 | 9..945 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:06:42 Download gff for
BO05494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43759-RB | 1063..1995 | 9..945 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:06:42 Download gff for
BO05494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19011069..19011684 | 9..628 | 99 | -> | Plus |
| X | 19011753..19012069 | 629..945 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:38:51 Download gff for
BO05494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18905102..18905717 | 9..628 | 99 | -> | Plus |
| arm_X | 18905786..18906102 | 629..945 | 100 | | Plus |
BO05494.complete Sequence
2239 bp assembled on 2008-08-14
GenBank Submission: FJ630066
> BO05494.complete
GAAGTTATCAGTCGACATGTATCCGGCCAGCGGCAGTGGAGGAGGCAGTG
CAGCGACCGCTGCTAAGTTCCAGAATCGCTGCGGATCGCCGCAGTTTGCC
AGCGACTATCCGCATCCACATCCGCACCAGCATCCGCACCAGACGACATC
GGTGGCGGTGCACAGTGCCCCGCCCGGAGTGAGTGGTGGCTCCATAGCCA
GCGGTGGGTCCATGTCCATGCGTCACGGCCAGCGGGTGGTGGCCTCAGCC
CATCAGCATCCCAGTCAGATGACCCTGAACCACGGCGGTATGGGCCACAA
CCACAACCACGGCATGGGCATGGCCATGGGAATGGGTCACAATCATGGAC
ATGCAGCGGCCACCTTGGGCCATCCGCACTCGCATTCGCACAACAACAGC
AGCGGCAGCAGCAGCCACGGACATGTGGGCTCGCATCTGATCTTCCCCGA
CGACATGGACAGCATCGAGTTCTGCATGCCGGCGGCGCCCTCCTCCTCGT
CCGCCTCCTCGCAGAACGGTCTCGGCGACCAGTTGCTCTTGGGCAGCAGT
CACGGCGAGGCGTTCACGGAGCGCCGAAGGAGGGGTCACAGCCGGCGCAG
CAATCACAAGATGGACGTGGAACAGCAGGTTAAGTGGTCTCGCAAGAACA
TCGCCGCCACCATGGAACGCTTCGAGCCCACGCCCAACACACAGTCCTCG
TCGTCCACTTCATCGCTGGACTATGGATTTGCAGCCGGCGTGATGACACC
CAGTGGCAGCAGTGCTACCGCCTCGCATGGCGGTGGCGCCTCCAATCCCT
CACTGCACGTGGCCTTCAACGGAGGCGGCGGAGCAGTGGGCGGTGGCTCA
TCCGCGGCATCAGGCGCTAGTGGTGTCAGCGGCTCGGGAGCAGCTGCAGC
GGCGGCGCCCTTCAACCATGTCTATTCGTATGCTTACTACGAACCGGGGG
CAGCCAAGTGTCACACCAACGTGCCTGCCGCCCAAGGAGCTGGTCCTGGA
CAGGGTCAGGCCCACCAGGTCCAGTCGAAGAGCCCGCCGCGCAACTCGAT
ACGCGCCCTGCTGGCCAAGAGCTTCCGCTCGAAGAGCAGCACCAACCATG
GCGGACAGTCCACATCCAGTTCGCCGAGTGCCGAGGAGCGGGATCGCCAC
ACATACACCACTCGCTACGGCACCACCGAGAACCTGTACGAGGAGGTCAG
CGATCAGAAGATTCGCAAGGTGCTGTCCGACAACCGGATCGCTAGTGGCT
CCAGTGTGGGCAATGTTAAGGAGGAGCAGCGGCGCGTACAGCACAACCAT
TTTAGGGTGCTCGACGAGCTAAATCTCTCGCTGGAGGCCCTAATAATGCC
GCCGACACCGCCGGACGTCAGTCCCAGTCACGCCATGGGCGCCGATGAGC
CAAGCACCTCGATGTCCGCTGGTGCAGTGGGTGGATCGGCGGTGTCCAGC
GTGGTGGCGGGACCAACGAAGACCGCCCAGAGACCCAGACGCGGCGGCCT
CCTGGGCGGTGCGGCTGGTGCAGGGGGCACCTCGAACTCGAGCTCCGCCT
CGCACGCCAGCCTGGAGAACCTATCGAGCACCCTGAACAGCATGGAGCTC
AAGGATCATGGCCACAGTAGCTGCATTAATCCGGAGTTCGATGAGGGCGA
CCTTGACTCCGGCTTCAGTGGCAGCGGCAGCAGCAGCGGCGCCAGCTACA
ACGAGAGTCTGCGGTACTACAAGTCCGCCACGCCCACCGGACCGCTGCAC
CACCATCACAACCACCAGCAGCAACAGGCGATGCACCATCACAGCCTGAA
CAACAACACGTTGCCGCACAACCTGCGCAGCTGTCGATCCTCCACGGCCT
CGGGCACTTCCACATCGAAAAGCAGCATGGCCAGCTGCAGCGAGGATCAG
GGCATTGGCATGACCTTGGCTGTGGGCGGCGGCGGCGGTGGTGGTGGTGG
TGTTGGTGTTGGCGGCATGATGACGCCCATGCACGAGGGATCCGGCGTCG
TGGGCGCCGGTTCCTTGTCGCCCTTCAACTATCCACGCCGCTGCTCGGCG
GACCAGCAGCGCGCTTCGGGCAGATCGATGGCCTCCGCCGTGGGCGTTGG
ACCCGGTGTGGGCGTGGCCGTTGGCGGCATGGGCGGCGGCAGCATGAGCA
TGAGCAGCAGCAGCAACGTGGCCCTGTCCACGGGCGCGAAACCCAAGAAG
AACTTCTGGACCATGAAACCGGCAAGCTTTCTAGACCAT
BO05494.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:14:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43759-RC | 2208 | CG43759-PC | 1..2205 | 17..2221 | 11010 | 100 | Plus |
| CG43759-RD | 2208 | CG43759-PD | 1..2205 | 17..2221 | 11010 | 100 | Plus |
| CG43759-RB | 2703 | CG43759-PB | 1..2205 | 17..2221 | 11010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:14:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43759-RC | 6340 | CG43759-RC | 1067..3271 | 17..2221 | 11010 | 100 | Plus |
| CG43759-RD | 4396 | CG43759-RD | 880..3084 | 17..2221 | 11010 | 100 | Plus |
| CG43759-RB | 4583 | CG43759-RB | 1067..3271 | 17..2221 | 11010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:14:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19011750..19013345 | 626..2221 | 7965 | 99.9 | Plus |
| X | 23542271 | X | 19011073..19011686 | 17..630 | 3070 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 01:14:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6879 | 1656..1808 | 146 | 59.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1100..1148 | 371..418 | 134 | 77.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6775..6860 | 1741..1822 | 132 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2318..2369 | 370..420 | 131 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2357..2421 | 353..418 | 129 | 70.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1054..1151 | 1725..1822 | 128 | 64 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2823..2911 | 2134..2224 | 125 | 64.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2612..2679 | 1741..1808 | 124 | 64.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2475..2514 | 2128..2167 | 119 | 77.5 | Plus |
| TART-A | 13424 | TART-A 13424bp | 904..1026 | 378..497 | 119 | 61.6 | Plus |
| TART-A | 13424 | TART-A 13424bp | 12082..12204 | 378..497 | 119 | 61.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6705..6799 | 321..420 | 118 | 62 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1066..1105 | 382..420 | 116 | 80 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 141..188 | 1655..1702 | 114 | 70.8 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9171..9218 | 1655..1702 | 114 | 70.8 | Plus |
BO05494.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:36:44 Download gff for
BO05494.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32541-RA | 1039..3254 | 9..2228 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:43:30 Download gff for
BO05494.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43759-RA | 1067..3271 | 17..2223 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:00:18 Download gff for
BO05494.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32541-RA | 1043..3247 | 17..2223 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:48:34 Download gff for
BO05494.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43759-RB | 1067..3271 | 17..2223 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:48:34 Download gff for
BO05494.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19011073..19011684 | 17..628 | 100 | -> | Plus |
| X | 19011753..19013345 | 629..2223 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:43:30 Download gff for
BO05494.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18905106..18905717 | 17..628 | 100 | -> | Plus |
| arm_X | 18905786..18907378 | 629..2223 | 99 | | Plus |
BO05494.pep Sequence
Translation from 16 to 2239
> BO05494.pep
MYPASGSGGGSAATAAKFQNRCGSPQFASDYPHPHPHQHPHQTTSVAVHS
APPGVSGGSIASGGSMSMRHGQRVVASAHQHPSQMTLNHGGMGHNHNHGM
GMAMGMGHNHGHAAATLGHPHSHSHNNSSGSSSHGHVGSHLIFPDDMDSI
EFCMPAAPSSSSASSQNGLGDQLLLGSSHGEAFTERRRRGHSRRSNHKMD
VEQQVKWSRKNIAATMERFEPTPNTQSSSSTSSLDYGFAAGVMTPSGSSA
TASHGGGASNPSLHVAFNGGGGAVGGGSSAASGASGVSGSGAAAAAAPFN
HVYSYAYYEPGAAKCHTNVPAAQGAGPGQGQAHQVQSKSPPRNSIRALLA
KSFRSKSSTNHGGQSTSSSPSAEERDRHTYTTRYGTTENLYEEVSDQKIR
KVLSDNRIASGSSVGNVKEEQRRVQHNHFRVLDELNLSLEALIMPPTPPD
VSPSHAMGADEPSTSMSAGAVGGSAVSSVVAGPTKTAQRPRRGGLLGGAA
GAGGTSNSSSASHASLENLSSTLNSMELKDHGHSSCINPEFDEGDLDSGF
SGSGSSSGASYNESLRYYKSATPTGPLHHHHNHQQQQAMHHHSLNNNTLP
HNLRSCRSSTASGTSTSKSSMASCSEDQGIGMTLAVGGGGGGGGGVGVGG
MMTPMHEGSGVVGAGSLSPFNYPRRCSADQQRASGRSMASAVGVGPGVGV
AVGGMGGGSMSMSSSSNVALSTGAKPKKNFWTMKPASFLDH
BO05494.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:19:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43759-PB | 900 | CG43759-PB | 1..738 | 1..738 | 3869 | 99.6 | Plus |
| CG43759-PC | 735 | CG43759-PC | 1..735 | 1..735 | 3868 | 100 | Plus |
| CG43759-PD | 735 | CG43759-PD | 1..735 | 1..735 | 3868 | 100 | Plus |
| CG43759-PA | 735 | CG43759-PA | 1..735 | 1..735 | 3868 | 100 | Plus |
| CG43658-PC | 2263 | CG43658-PC | 183..529 | 300..639 | 294 | 31.7 | Plus |
