Clone BO05522 Report

Search the DGRC for BO05522

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:55
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG4844-RA
Protein status:BO05522.pep: validated full length
Sequenced Size:883

Clone Sequence Records

BO05522.3prime Sequence

858 bp (851 high quality bases) assembled on 2005-12-02

> BO05522.3prime
ATGGTCTAGAAAGCTTGCGTTATTGGCCGCCATTGGCTTGCCGAGGACAC
GCATGGCATTGGAGTAGTCCGAATCGATCTGCGGAATGATCTGCTGTTCG
TTGGGCCGCAGGGTGCGTATCAGATCGTTGAGTGACAGGGAGGATTGGGG
GGTCAGCTCCTCCTTGGGCTGCAGCTCCTGGGAGCTGGCCATTTTCTGGA
AGTCCTGGGCGATCTGCTTGATGCGCTCCTCGATGGCGGCGGCTGGGGAT
TCAGTGGAGCTGGGCATCGCCAATGGTTCGTTGGCCTTGATAAGATCCAC
CGGCGTCTCATTTTCCAAGTCAGTCTCGCCCTCAGCTCCATCCTGCTCGT
GCTCTCCATCCGCCTCCGCATCGTGTTGCGAGCTCTCGTTATCCTCAGCC
GCCGCGGGAGCTGGTGCCGAGTCCGCATCCGCATCCTCCTGCTGCAACTG
CTGCTGTACCTCTTCGATCGAATGCACCTCGGGGTGGAGTTCGTTGTCGC
TCAGTGGGAATACGTGCTCCTTGATATCGCCATCGTTGTCGTTGCTCAGC
TCACGGGCATGCTCCTCGAAGTTGTCGTGCTCGTCATGCTCCTCTTCGCC
CTCGGCCTCATGGTCATCGTGCTCCTCGCCATCCAAATCCGCTTCCTGAT
CCTCCACATCCACGTCAGTGGAATCCGTATCGGGCAGCGAGCGATCATGG
TTCAGCTTAAAGGACATAAACGAGGGTTGCTGCTGGGAGCTGGAATCATC
GATCAGTCGGTGGCCAACGGCTGGCGAAGATTTGGCCTTGGCAGCGGTGT
ACATTGCTCCACTGGTGGACATCAGCAGGGGCAAGGGTGTGGTGGTGGCG
GCCACATG

BO05522.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:22:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG4844-PA 852 CG4844-RA 10..849 858..19 4200 100 Minus
CG4844-PB 852 CG4844-RB 10..849 858..19 4200 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:53:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG43164-RE 2012 CG43164-RE 863..1702 858..19 4200 100 Minus
CG43164-RC 2338 CG43164-RC 1189..2028 858..19 4200 100 Minus
CG43164-RB 2447 CG43164-RB 1298..2137 858..19 4200 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:53:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17507496..17508335 858..19 4200 100 Minus
Blast to na_te.dros performed on 2015-02-11 15:53:57 has no hits.

BO05522.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:24:10 Download gff for BO05522.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4844-PB 10..852 18..858 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:46:47 Download gff for BO05522.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4844-PB 10..852 18..858 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:36:19 Download gff for BO05522.3prime
Subject Subject Range Query Range Percent Splice Strand
CG43164-RB 1298..2142 13..858 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:34:49 Download gff for BO05522.3prime
Subject Subject Range Query Range Percent Splice Strand
CG43164-RB 1298..2142 13..858 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:34:49 Download gff for BO05522.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 17507496..17508340 13..858 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:36:19 Download gff for BO05522.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13395001..13395845 13..858 99   Minus

BO05522.5prime Sequence

881 bp (802 high quality bases) assembled on 2005-12-02

> BO05522.5prime
GAAGTTATCAGTCGACATGAACCTGCATGTGGCCGCCACCACCACACCCT
TGCCCCTGCTGATGTCCACCAGTGGAGCAATGTACACCGCTGCCAAGGCC
AAATCTTCGCCAGCCGTTGGCCACCGACTGATCGATGATTCCAGCTCCCA
GCAGCAACCCTCGTTTATGTCCTTTAAGCTGAACCATGATCGCTCGCTGC
CCGATACGGATTCCACTGACGTGGATGTGGAGGATCAGGAAGCGGATTTG
GATGGCGAGGAGCACGATGACCATGAGGCCGAGGGCGAAGAGGAGCATGA
CGAGCACGACAACTTCGAGGAGCATGCCCGTGAGCTGAGCAACGACAACG
ATGGCGATATCAAGGAGCACGTATTCCCACTGAGCGACAACGAACTCCAC
CCCGAGGTGCATTCGATCGAAGAGGTACAGCAGCAGTTGCAGCAGGAGGA
TGCGGATGCGGACTCGGCACCAGCTCCCGCGGCGGCTGAGGATAACGAGA
GCTCGCAACACGATGCGGAGGCGGATGGAGAGCACGAGCAGGATGGAGCT
GAGGGCGAGACTGACTTGGAAAATGAGACGCCGGTGGATCTTATCAAGGC
CAACGAACCATTGGCGATGCCCAGCTCCACTGAATCCCCAGCCGCCGCCA
TCGAGGAGCGCATCAAGCAGATCGCCCAGGACTTCCAGAAAATGGCCAGC
TCCCAGGAGCTGCAGCCCAAGGAGGAGCTGACCCCCCAATCCTCCCTGTC
ACTCAACGATCTGATACGCACCCTGCGGCCCAACGAACAGCAGATCATTC
CGCAGATCGATTCGGACTACTCCAATGCCATGCGTGTCCTCGGCAAGCCA
ATGGCGGCCAATAACGCAAGCTTTCTAGACC

BO05522.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:22:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG4844-PA 852 CG4844-RA 1..849 17..865 4245 100 Plus
CG4844-PB 852 CG4844-RB 1..849 17..865 4245 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:42:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG43164-RE 2012 CG43164-RE 854..1702 17..865 4245 100 Plus
CG43164-RC 2338 CG43164-RC 1180..2028 17..865 4245 100 Plus
CG43164-RB 2447 CG43164-RB 1289..2137 17..865 4245 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:42:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17507487..17508335 17..865 4245 100 Plus
Blast to na_te.dros performed on 2015-02-04 19:42:07 has no hits.

BO05522.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:24:12 Download gff for BO05522.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4844-PB 1..852 17..866 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:46:48 Download gff for BO05522.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4844-PB 1..852 17..866 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:19:34 Download gff for BO05522.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43164-RB 1289..2142 17..871 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:40:28 Download gff for BO05522.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43164-RB 1289..2142 17..871 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:40:28 Download gff for BO05522.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17507487..17508340 17..871 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:19:34 Download gff for BO05522.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13394992..13395845 17..871 99   Plus

BO05522.complete Sequence

883 bp (883 high quality bases) assembled on 2005-09-12

GenBank Submission: FJ630071

> BO05522.complete
GAAGTTATCAGTCGACATGAACCTGCATGTGGCCGCCACCACCACACCCT
TGCCCCTGCTGATGTCCACCAGTGGAGCAATGTACACCGCTGCCAAGGCC
AAATCTTCGCCAGCCGTTGGCCACCGACTGATCGATGATTCCAGCTCCCA
GCAGCAACCCTCGTTTATGTCCTTTAAGCTGAACCATGATCGCTCGCTGC
CCGATACGGATTCCACTGACGTGGATGTGGAGGATCAGGAAGCGGATTTG
GATGGCGAGGAGCACGATGACCATGAGGCCGAGGGCGAAGAGGAGCATGA
CGAGCACGACAACTTCGAGGAGCATGCCCGTGAGCTGAGCAACGACAACG
ATGGCGATATCAAGGAGCACGTATTCCCACTGAGCGACAACGAACTCCAC
CCCGAGGTGCATTCGATCGAAGAGGTACAGCAGCAGTTGCAGCAGGAGGA
TGCGGATGCGGACTCGGCACCAGCTCCCGCGGCGGCTGAGGATAACGAGA
GCTCGCAACACGATGCGGAGGCGGATGGAGAGCACGAGCAGGATGGAGCT
GAGGGCGAGACTGACTTGGAAAATGAGACGCCGGTGGATCTTATCAAGGC
CAACGAACCATTGGCGATGCCCAGCTCCACTGAATCCCCAGCCGCCGCCA
TCGAGGAGCGCATCAAGCAGATCGCCCAGGACTTCCAGAAAATGGCCAGC
TCCCAGGAGCTGCAGCCCAAGGAGGAGCTGACCCCCCAATCCTCCCTGTC
ACTCAACGATCTGATACGCACCCTGCGGCCCAACGAACAGCAGATCATTC
CGCAGATCGATTCGGACTACTCCAATGCCATGCGTGTCCTCGGCAAGCCA
ATGGCGGCCAATAACGCAAGCTTTCTAGACCAT

BO05522.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:56:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG43164-RE 1473 CG43164-PE 622..1470 17..865 4245 100 Plus
CG43164-RC 1476 CG43164-PC 625..1473 17..865 4245 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG43164-RE 2012 CG43164-RE 854..1702 17..865 4245 100 Plus
CG43164-RC 2338 CG43164-RC 1180..2028 17..865 4245 100 Plus
CG43164-RB 2447 CG43164-RB 1289..2137 17..865 4245 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17507487..17508335 17..865 4245 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:56:19 has no hits.

BO05522.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:37:19 Download gff for BO05522.complete
Subject Subject Range Query Range Percent Splice Strand
CG4844-RB 1..852 17..866 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:05:30 Download gff for BO05522.complete
Subject Subject Range Query Range Percent Splice Strand
CG18431-RA 1241..2094 17..871 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:39:14 Download gff for BO05522.complete
Subject Subject Range Query Range Percent Splice Strand
CG43164-RB 1289..2137 17..867 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:37:19 Download gff for BO05522.complete
Subject Subject Range Query Range Percent Splice Strand
CG18431-RA 1241..2094 17..871 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:14:08 Download gff for BO05522.complete
Subject Subject Range Query Range Percent Splice Strand
CG43164-RB 1289..2137 17..867 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:14:08 Download gff for BO05522.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17507487..17508335 17..867 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:39:14 Download gff for BO05522.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13394992..13395840 17..867 99   Plus

BO05522.pep Sequence

Translation from 16 to 883

> BO05522.pep
MNLHVAATTTPLPLLMSTSGAMYTAAKAKSSPAVGHRLIDDSSSQQQPSF
MSFKLNHDRSLPDTDSTDVDVEDQEADLDGEEHDDHEAEGEEEHDEHDNF
EEHARELSNDNDGDIKEHVFPLSDNELHPEVHSIEEVQQQLQQEDADADS
APAPAAAEDNESSQHDAEADGEHEQDGAEGETDLENETPVDLIKANEPLA
MPSSTESPAAAIEERIKQIAQDFQKMASSQELQPKEELTPQSSLSLNDLI
RTLRPNEQQIIPQIDSDYSNAMRVLGKPMAANNASFLDH

BO05522.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:41:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG43164-PE 490 CG43164-PE 208..490 1..283 1454 100 Plus
CG43164-PC 491 CG43164-PC 209..491 1..283 1454 100 Plus