Clone BO05527 Report

Search the DGRC for BO05527

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:55
Well:27
Vector:pDNR-Dual
Associated Gene/Transcriptisopeptidase-T-3-RA
Protein status:BO05527.pep: validated full length
Sequenced Size:1705

Clone Sequence Records

BO05527.3prime Sequence

784 bp (768 high quality bases) assembled on 2005-12-02

> BO05527.3prime
ATGGTCTAGAAAGCTTGCCCAGCGGTTCGTATAGAACTGATTGATGCCAA
GCACATGCTTCTCCTCATGGTACTTTTGAAGGATATGTGTGATGACCGAG
GTTGTGTCGTTGTCGCCACGCCACACGCGTATCGCATGTTCGTTTTCCAG
GATGCCCAGAAATGCCAAAAAAGTCTTTGGATTGCTTAGGGTCATCTGGA
CTTGTGGCATTTCCAGGATCACCTTTAGGATGGGCGAATCGGGCGCCAAG
CCTTCACGCAGTTCAATAACGCTACCCGATCGATTGTCGCACAACCATTC
GCACGCGGACGCCTTGTTGTTGCCAGTTTTCTTCAGTGCCGCGAGCACTG
CCGTCTCCTCGAAGCCCATTTCTGTAAGCGATTCCACAATCTCATCGCTG
GGAGGGGAATCCCGGTGGCTGTAGATTCGTACAATCTCAATCAAGGCAGC
AGTGTTTTCAATGGTTTCATTATTGGTGACAATCGTGGAGGGTGAGATGG
AAGATAGACTGTGCTGCATATTCATGCCCGGCGGTTCCTGTGGATTTTCC
TCGTTTTGGTTCTGTATTAGCCACTCCATCGTGGTCGAGTAAATGCCATT
GTGTGCTTTTAAGGCAAATGCGGCTAGCTCCCGCTTGAAGCCCATGTCCA
CGAGGCATTGCAGCGTATCCGCTTGCTGATTTCGGCGATTGATCAAACGT
TGCTTTAGCATAGCTATCAGGCGTGGAGCATAAGGGCCAGCTCCTATAAC
CGCCGCAGAAGCTTGAGCCAAAGAGATCAACACC

BO05527.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:23:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG11025-PA 1674 isopeptidase-T-3-RA 906..1671 784..19 3830 100 Minus
CG11025-PB 1308 isopeptidase-T-3-RB 540..1305 784..19 3830 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:20:06
Subject Length Description Subject Range Query Range Score Percent Strand
isopeptidase-T-3-RC 2491 CG11025-RC 1055..1820 784..19 3830 100 Minus
isopeptidase-T-3-RB 1778 CG11025-RB 644..1409 784..19 3830 100 Minus
isopeptidase-T-3-RA 2479 CG11025-RA 1043..1808 784..19 3830 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:19:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19671926..19672242 784..468 1585 100 Minus
2R 25286936 2R 19672294..19672597 468..165 1520 100 Minus
2R 25286936 2R 19672660..19672806 165..19 735 100 Minus
Blast to na_te.dros performed on 2015-02-12 00:20:02 has no hits.

BO05527.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:24:22 Download gff for BO05527.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11025-PB 540..1308 16..784 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:47:01 Download gff for BO05527.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11025-PB 540..1308 16..784 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:38:56 Download gff for BO05527.3prime
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RA 1043..1814 14..784 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:59:58 Download gff for BO05527.3prime
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RA 1043..1814 14..784 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:59:58 Download gff for BO05527.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 19672661..19672812 14..164 98   Minus
2R 19671926..19672241 469..784 100 -> Minus
2R 19672294..19672597 165..468 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:38:56 Download gff for BO05527.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15559431..15559746 469..784 100 -> Minus
arm_2R 15559799..15560102 165..468 100 -> Minus
arm_2R 15560166..15560317 14..164 98   Minus

BO05527.5prime Sequence

793 bp (709 high quality bases) assembled on 2005-12-02

> BO05527.5prime
GAAGTTATCAGTCGACATGATACCCTGGATGCGGGAGAAGTTCAACGAGA
AACGGGCCAAGTGGTTGGCGCGTAGCAAGCGCAGCGGTGGTTCTCCGGCT
GACGAAAGCCCTCGGAGCAGCAGTCATAGCCACAGCCAGCGGACAGACGC
CAGCGATGCGGAGAGCCTGAGCGGATCCTCGTTGAATGTCCACACGGCGG
AATCTGAAACGCAGACGGATGGCGGGATATCCGCTTCCAATTCGCGGCCC
CTTGTGGGCGGGGGCAGTTGCGTCCTAAGGACTCCATCGCCCGCTCGCCG
ACGTCGCATTCACCTTGAGCTACAGCTGCAGCGACGAGAGGAACGTGCTG
AGCATCAGAAGGTGGTGCCACAGGACTCGCCCACGCCCACTCACCAACAG
CAGGCTAATGCGAAATCAGCCCATACAAATCGCCCAGGTAGCTCTACTTC
TGGCGAGGCAGACGATGCCAGCAGGCCAGGTGAATCTATCCTGGTGCGGG
TAATCTGCCCCAGCTCTCGGGTTCTTATCTTCAAAACGGACGTTAATAAG
CGCCTAAACGAGCTGAAGAGTGAGGTGATTCTGGAACTGAGCGACGATCC
CGACTCCATCCAGCTATTTGCCCCAGATGTGCGGCATCTTAATCCGCGAT
ACCGTCTCTATCGGGCGGAATACTTCGGCGGCGAGCTTAACGAGGGCGAC
ACGCTGGCCCAGCTAAAAGTTCGCAACAATGAGACTTTCATACTCTCCCC
ACGACGCAATACTCTGCCGCAGACTGTTTTCACGGATACGTGA

BO05527.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:23:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG11025-PA 1674 isopeptidase-T-3-RA 1..763 17..779 3815 100 Plus
CG11025-PB 1308 isopeptidase-T-3-RB 30..397 412..779 1840 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:21:49
Subject Length Description Subject Range Query Range Score Percent Strand
isopeptidase-T-3-RA 2479 CG11025-RA 138..913 17..793 3860 99.9 Plus
isopeptidase-T-3-RC 2491 CG11025-RC 138..925 17..793 3730 98.4 Plus
isopeptidase-T-3-RB 1778 CG11025-RB 134..514 412..793 1885 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:21:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19670755..19671150 17..412 1980 100 Plus
2R 25286936 2R 19671361..19671741 412..793 1860 99.7 Plus
Blast to na_te.dros performed on 2015-02-12 00:21:46 has no hits.

BO05527.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:24:22 Download gff for BO05527.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11025-PA 1..775 17..792 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:47:02 Download gff for BO05527.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11025-PA 1..775 17..792 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:38:59 Download gff for BO05527.5prime
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RA 138..912 17..792 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:05:44 Download gff for BO05527.5prime
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RA 138..912 17..792 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:05:44 Download gff for BO05527.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 19670755..19671149 17..411 100 -> Plus
2R 19671361..19671740 412..792 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:38:59 Download gff for BO05527.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15558260..15558654 17..411 100 -> Plus
arm_2R 15558866..15559245 412..792 99   Plus

BO05527.complete Sequence

1705 bp (1705 high quality bases) assembled on 2006-08-21

GenBank Submission: FJ630073

> BO05527.complete
GAAGTTATCAGTCGACATGATACCCTGGATGCGGGAGAAGTTCAACGAGA
AACGGGCCAAGTGGTTGGCGCGTAGCAAGCGCAGCGGTGGTTCTCCGGCT
GACGAAAGCCCTCGGAGCAGCAGTCATAGCCACAGCCAGCGGACAGACGC
CAGCGATGCGGAGAGCCTGAGCGGATCCTCGTTGAATGTCCACACGGCGG
AATCTGAAACGCAGACGGATGGCGGGATATCCGCTTCCAATTCGCGGCCC
CTTGTGGGCGGGGGCAGTTGCGTCCTAAGGACTCCATCGCCCGCTCGCCG
ACGTCGCATTCACCTTGAGCTACAGCTGCAGCGACGAGAGGAACGTGCTG
AGCATCAGAAGGTGGTGCCACAGGACTCGCCCACGCCCACTCACCAACAG
CAGGCTAATGCGAAATCAGCCCATACAAATCGCCCAGGTAGCTCTACTTC
TGGCGAGGCAGACGATGCCAGCAGGCCAGGTGAATCTATCCTGGTGCGGG
TAATCTGCCCCAGCTCTCGGGTTCTTATCTTCAAAACGGACGTTAATAAG
CGCCTAAACGAGCTGAAGAGTGAGGTGATTCTGGAACTGAGCGACGATCC
CGACTCCATCCAGCTATTTGCCCCAGATGTGCGGCATCTTAATCCGCGAT
ACCGTCTCTATCGGGCGGAATACTTCGGCGGCGAGCTTAACGAGGGCGAC
ACGCTGGCCCAGCTAAAAGTTCGCAACAATGAGACTTTCATACTCTCCCC
ACGACGCAATACTCTGCCGCAGACTGTTTCACGGATACGTGAGGTTCCTG
GCCCAAATGAGCAGCTGGTGGAGAGCGCCACCCGATACGTGCCCGTCAAT
TGCAACCAGCTGCCCACCATCGATATTAATGAAATCTTTCAGCAGTCGAA
TATCCAATACGATGTGCGAAAGGTGTTGATCTCTTTGGCTCAAGCTTCTG
CGGCGGTTATAGGAGCTGGCCCTTATGCTCCACGCCTGATAGCTATGCTA
AAGCAACGTTTGATCAATCGCCGAAATCAGCAAGCGGATACGCTGCAATG
CCTCGTGGACATGGGCTTCAAGCGGGAGCTAGCCGCATTTGCCTTAAAAG
CACACAATGGCATTTACTCGACCACGATGGAGTGGCTAATACAGAACCAA
AACGAGGAAAATCCACAGGAACCGCCGGGCATGAATATGCAGCACAGTCT
ATCTTCCATCTCACCCTCCACGATTGTCACCAATAATGAAACCATTGAAA
ACACTGCTGCCTTGATTGAGATTGTACGAATCTACAGCCACCGGGATTCC
CCTCCCAGCGATGAGATTGTGGAATCGCTTACAGAAATGGGCTTCGAGGA
GACGGCAGTGCTCGCGGCACTGAAGAAAACTGGCAACAACAAGGCGTCCG
CGTGCGAATGGTTGTGCGACAATCGATCGGGTAGCGTTATTGAACTGCGT
GAAGGCTTGGCGCCCGATTCGCCCATCCTAAAGGTGATCCTGGAAATGCC
ACAAGTCCAGATGACCCTAAGCAATCCAAAGACTTTTTTGGCATTTCTGG
GCATCCTGGAAAACGAACATGCGATACGCGTGTGGCGTGGCGACAACGAC
ACAACCTCGGTCATCACACATATCCTTCAAAAGTACCATGAGGAGAAGCA
TGTGCTTGGCATCAATCAGTTCTATACGAACCGCTGGGCAAGCTTTCTAG
ACCAT

BO05527.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:00:31
Subject Length Description Subject Range Query Range Score Percent Strand
isopeptidase-T-3-RA 1674 CG11025-PA 1..1671 17..1687 8355 100 Plus
isopeptidase-T-3-RC 1686 CG11025-PC 1..1683 17..1687 8200 99.3 Plus
isopeptidase-T-3-RB 1308 CG11025-PB 30..1305 412..1687 6380 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:00:32
Subject Length Description Subject Range Query Range Score Percent Strand
isopeptidase-T-3-RA 2479 CG11025-RA 138..1808 17..1687 8355 100 Plus
isopeptidase-T-3-RC 2491 CG11025-RC 138..1820 17..1687 8200 99.3 Plus
isopeptidase-T-3-RB 1778 CG11025-RB 134..1409 412..1687 6380 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:00:29
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19671361..19671850 412..901 2450 100 Plus
2R 25286936 2R 19670755..19671150 17..412 1980 100 Plus
2R 25286936 2R 19671906..19672242 902..1238 1685 100 Plus
2R 25286936 2R 19672294..19672597 1238..1541 1520 100 Plus
2R 25286936 2R 19672660..19672806 1541..1687 735 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:00:30 has no hits.

BO05527.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:54:17 Download gff for BO05527.complete
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RA 1..1674 17..1690 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:10:39 Download gff for BO05527.complete
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RA 137..1813 17..1692 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:53:03 Download gff for BO05527.complete
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RA 138..1808 17..1689 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:54:17 Download gff for BO05527.complete
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RA 137..1813 17..1692 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:08:07 Download gff for BO05527.complete
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RA 138..1808 17..1689 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:08:07 Download gff for BO05527.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19670755..19671149 17..411 100 -> Plus
2R 19671361..19671850 412..901 100 -> Plus
2R 19671906..19672241 902..1237 100 -> Plus
2R 19672294..19672597 1238..1541 100 -> Plus
2R 19672661..19672806 1542..1689 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:53:03 Download gff for BO05527.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15558260..15558654 17..411 100 -> Plus
arm_2R 15558866..15559355 412..901 100 -> Plus
arm_2R 15559411..15559746 902..1237 100 -> Plus
arm_2R 15559799..15560102 1238..1541 100 -> Plus
arm_2R 15560166..15560311 1542..1689 98   Plus

BO05527.pep Sequence

Translation from 16 to 1705

> BO05527.pep
MIPWMREKFNEKRAKWLARSKRSGGSPADESPRSSSHSHSQRTDASDAES
LSGSSLNVHTAESETQTDGGISASNSRPLVGGGSCVLRTPSPARRRRIHL
ELQLQRREERAEHQKVVPQDSPTPTHQQQANAKSAHTNRPGSSTSGEADD
ASRPGESILVRVICPSSRVLIFKTDVNKRLNELKSEVILELSDDPDSIQL
FAPDVRHLNPRYRLYRAEYFGGELNEGDTLAQLKVRNNETFILSPRRNTL
PQTVSRIREVPGPNEQLVESATRYVPVNCNQLPTIDINEIFQQSNIQYDV
RKVLISLAQASAAVIGAGPYAPRLIAMLKQRLINRRNQQADTLQCLVDMG
FKRELAAFALKAHNGIYSTTMEWLIQNQNEENPQEPPGMNMQHSLSSISP
STIVTNNETIENTAALIEIVRIYSHRDSPPSDEIVESLTEMGFEETAVLA
ALKKTGNNKASACEWLCDNRSGSVIELREGLAPDSPILKVILEMPQVQMT
LSNPKTFLAFLGILENEHAIRVWRGDNDTTSVITHILQKYHEEKHVLGIN
QFYTNRWASFLDH

BO05527.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:57:28
Subject Length Description Subject Range Query Range Score Percent Strand
isopeptidase-T-3-PA 557 CG11025-PA 1..557 1..557 2863 100 Plus
isopeptidase-T-3-PC 561 CG11025-PC 1..561 1..557 2848 99.3 Plus
isopeptidase-T-3-PB 435 CG11025-PB 11..435 133..557 2181 100 Plus