Clone BO05614 Report

Search the DGRC for BO05614

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:56
Well:14
Vector:pDNR-Dual
Associated Gene/Transcriptcapt-RA
Protein status:BO05614.pep: validated full length
Sequenced Size:1306

Clone Sequence Records

BO05614.3prime Sequence

827 bp (758 high quality bases) assembled on 2005-12-02

> BO05614.3prime
ATGGTCTAGAAAGCTTGCGCCGAGGCTGTCCACGCACACAGTCTTCAGGG
TCTTGCCGGCAATCGTGGTCTTATACTGCTCCGGTAAAGCCAACTCGGTA
TAATCGCCGCTGTCGTCGGGCAACAGGATGTTCATCTCCGAGGACTTGGA
GTTGACGATCTCCACGCCCAGCGAGTCCTTGGACAGATACATCTGGCAGC
CGTCGGTCTTGTCGATCGATACCGTCGGCACCGAGCCGAGCACCTGCATC
TGCACGCTCTGGCAGTTGACGAACTCCACGGAGGCCACCACGGAATCGAA
CAGCAGGGAGCACTTCTTGCAGGAGTCGAAGACGATGTTGTTCACCTTGC
CCTTGACGGTCAGAGTGGATCCCTCACACTTGAACACATACACCACGTTG
TTCATCTCGGCGTTCTCCACCAACAGCCCGGTGTTGTTCTTCTGGTACTC
GATGATCCACTTCTTTCCGTCGCGCTCGAAAACGGGCGCCTTGGCTTGCG
CAGCTGATGGAGCAGCAACGGCCTTGCTGCCGCCCGACTGGGCTGGCGAT
TTGAACGGAGCCGGTCCAGTGCGTAGAGATGGATTTTTATGGGTCTGCAT
GTCGCCAGTGACCTTCTTCAAGCCCTTGGTGATGTCGGCACCCTGGTTGA
TCTGGGCGAAGAGGGCGCTGCGATCATCTCCGGCGCTATCCAGCTTGAGG
GCACTCAGATCCAGCATGGGCGGCGGTGGGGGCAGACCACCGGGTGGCGG
TGGTGGCGGGGCACCTCCGGCGGGGGCCGCTCCCTTGCCGGACCACACCA
AGCCCGTGGTGTGGTACTGCCGGATGT

BO05614.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:24:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG33979-PA 1275 capt-RA 464..1272 827..19 4045 100 Minus
CG33979-PB 2352 capt-RB 1541..2349 827..19 4045 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:44:58
Subject Length Description Subject Range Query Range Score Percent Strand
capt-RC 2422 CG33979-RC 1257..2065 827..19 4045 100 Minus
capt-RA 2040 CG33979-RA 875..1683 827..19 4045 100 Minus
capt-RB 3049 CG33979-RB 1884..2692 827..19 4045 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:44:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1152177..1152701 100..624 2625 100 Plus
2L 23513712 2L 1152770..1152974 623..827 1025 100 Plus
2L 23513712 2L 1152035..1152115 19..99 405 100 Plus
Blast to na_te.dros performed on 2015-02-04 19:44:57 has no hits.

BO05614.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:26:39 Download gff for BO05614.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33979-PB 1541..2352 15..827 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:50:12 Download gff for BO05614.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33979-PB 1541..2352 15..827 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:19:58 Download gff for BO05614.3prime
Subject Subject Range Query Range Percent Splice Strand
capt-RB 1884..2696 14..827 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:41:26 Download gff for BO05614.3prime
Subject Subject Range Query Range Percent Splice Strand
capt-RB 1884..2696 14..827 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:41:26 Download gff for BO05614.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 1152031..1152115 14..99 97 <- Plus
2L 1152177..1152700 100..623 100 <- Plus
2L 1152771..1152974 624..827 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:19:58 Download gff for BO05614.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1152031..1152115 14..99 97 <- Plus
arm_2L 1152177..1152700 100..623 100 <- Plus
arm_2L 1152771..1152974 624..827 100   Plus

BO05614.5prime Sequence

811 bp (810 high quality bases) assembled on 2005-12-02

> BO05614.5prime
GAAGTTATCAGTCGACATGAGTGTCGCCGGATTCGAGGACATTGTGGCGG
GTCCGCTGAGCCAATACCTAACTCTCTCCGCCAAAATTGGCGGCGATGTG
GCGCAGCATGCGGAGCTCGTGAAGAGCGCCTTTGGCTCCCAACTGCAGTA
CGTGACGCTGGCCACCCAGATCGCCCAGCCGGCGCAGCCCAAGCAGGCGG
AGCTTCTGAAGCCGACCTCGACGCAGATCAGCGCCATCCAGGACTTCCGC
GAGAAGCACCGCTCCTCGCCCTTCTTCAACCACCTGTCGGCCATCAGCGA
AAGCATTCCCGCCTTGGGCTGGGTGTGCGTGGAGAAGACCCCGGGTCCCT
ATGTCAAGGAGATGAACGACGCCGGCCAGTTCTACACGAACCGCGTGCTC
AAGGAGTGGAAGGAGAAGGATGTTACGCATGTGGAGTGGGCCCGCGCCTG
GGTGCAGACGCTCACCGAACTGCAGGCCTACATCCGGCAGTACCACACCA
CGGGCTTGGTGTGGTCCGGCAAGGGAGCGGCCCCCGCCGGAGGTGCCCCG
CCACCACCGCCACCCGGTGGTCTGCCCCCACCGCCGCCCATGCTGGATCT
GAGTGCCCTCAAGCTGGATAGCGCCGGAGATGATCGCAGCGCCCTCTTCG
CCCAGATCAACCAGGGTGCCGACATCACCAAGGGCTTGAAGAAGGTCACT
GGCGACATGCAGACCCATAAAAATCCATCTCTACGCACTGGACCGGCTCC
GTTCAAATCGCCAGCCCAGTCGGGCGGCAGCAAGGCCGTTGCTGCTCCAT
CAGCTGCGCAA

BO05614.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:24:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG33979-PB 2352 capt-RB 1076..1872 15..811 3985 100 Plus
CG33979-PA 1275 capt-RA 1..795 17..811 3975 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:28:22
Subject Length Description Subject Range Query Range Score Percent Strand
capt-RC 2422 CG33979-RC 792..1588 15..811 3985 100 Plus
capt-RA 2040 CG33979-RA 410..1206 15..811 3985 100 Plus
capt-RB 3049 CG33979-RB 1419..2215 15..811 3985 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:28:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1152770..1153319 684..135 2750 100 Minus
2L 23513712 2L 1152573..1152701 811..683 645 100 Minus
2L 23513712 2L 1153386..1153506 135..15 605 100 Minus
Blast to na_te.dros performed on 2015-02-10 17:28:17 has no hits.

BO05614.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:26:40 Download gff for BO05614.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33979-PB 1071..1870 9..809 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:50:13 Download gff for BO05614.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33979-PB 1071..1870 9..809 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 05:54:13 Download gff for BO05614.5prime
Subject Subject Range Query Range Percent Splice Strand
capt-RB 1414..2213 9..809 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:45:09 Download gff for BO05614.5prime
Subject Subject Range Query Range Percent Splice Strand
capt-RB 1414..2213 9..809 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:45:09 Download gff for BO05614.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 1152575..1152700 684..809 100 <- Minus
2L 1152771..1153318 136..683 100 <- Minus
2L 1153386..1153511 9..135 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 05:54:13 Download gff for BO05614.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1152575..1152700 684..809 100 <- Minus
arm_2L 1152771..1153318 136..683 100 <- Minus
arm_2L 1153386..1153511 9..135 98   Minus

BO05614.complete Sequence

1306 bp (1306 high quality bases) assembled on 2005-10-17

GenBank Submission: FJ630092

> BO05614.complete
GAAGTTATCAGTCGACATGAGTGTCGCCGGATTCGAGGACATTGTGGCGG
GTCCGCTGAGCCAATACCTAACTCTCTCCGCCAAAATTGGCGGCGATGTG
GCGCAGCATGCGGAGCTCGTGAAGAGCGCCTTTGGCTCCCAACTGCAGTA
CGTGACGCTGGCCACCCAGATCGCCCAGCCGGCGCAGCCCAAGCAGGCGG
AGCTTCTGAAGCCGACCTCGACGCAGATCAGCGCCATCCAGGACTTCCGC
GAGAAGCACCGCTCCTCGCCCTTCTTCAACCACCTGTCGGCCATCAGCGA
AAGCATTCCCGCCTTGGGCTGGGTGTGCGTGGAGAAGACCCCGGGTCCCT
ATGTCAAGGAGATGAACGACGCCGGCCAGTTCTACACGAACCGCGTGCTC
AAGGAGTGGAAGGAGAAGGATGTTACGCATGTGGAGTGGGCCCGCGCCTG
GGTGCAGACGCTCACCGAACTGCAGGCCTACATCCGGCAGTACCACACCA
CGGGCTTGGTGTGGTCCGGCAAGGGAGCGGCCCCCGCCGGAGGTGCCCCG
CCACCACCGCCACCCGGTGGTCTGCCCCCACCGCCGCCCATGCTGGATCT
GAGTGCCCTCAAGCTGGATAGCGCCGGAGATGATCGCAGCGCCCTCTTCG
CCCAGATCAACCAGGGTGCCGACATCACCAAGGGCTTGAAGAAGGTCACT
GGCGACATGCAGACCCATAAAAATCCATCTCTACGCACTGGACCGGCTCC
GTTCAAATCGCCAGCCCAGTCGGGCGGCAGCAAGGCCGTTGCTGCTCCAT
CAGCTGCGCAAGCCAAGGCGCCCGTTTTCGAGCGCGACGGAAAGAAGTGG
ATCATCGAGTACCAGAAGAACAACACCGGGCTGTTGGTGGAGAACGCCGA
GATGAACAACGTGGTGTATGTGTTCAAGTGTGAGGGATCCACTCTGACCG
TCAAGGGCAAGGTGAACAACATCGTCTTCGACTCCTGCAAGAAGTGCTCC
CTGCTGTTCGATTCCGTGGTGGCCTCCGTGGAGTTCGTCAACTGCCAGAG
CGTGCAGATGCAGGTGCTCGGCTCGGTGCCGACGGTATCGATCGACAAGA
CCGACGGCTGCCAGATGTATCTGTCCAAGGACTCGCTGGGCGTGGAGATC
GTCAACTCCAAGTCCTCGGAGATGAACATCCTGTTGCCCGACGACAGCGG
CGATTATACCGAGTTGGCTTTACCGGAGCAGTATAAGACCACGATTGCCG
GCAAGACCCTGAAGACTGTGTGCGTGGACAGCCTCGGCGCAAGCTTTCTA
GACCAT

BO05614.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
capt-RB 2352 CG33979-PB 1076..2349 15..1288 6370 100 Plus
capt-RC 1275 CG33979-PC 1..1272 17..1288 6360 100 Plus
capt-RA 1275 CG33979-PA 1..1272 17..1288 6360 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:06:31
Subject Length Description Subject Range Query Range Score Percent Strand
capt-RC 2422 CG33979-RC 792..2065 15..1288 6370 100 Plus
capt-RA 2040 CG33979-RA 410..1683 15..1288 6370 100 Plus
capt-RB 3049 CG33979-RB 1419..2692 15..1288 6370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1152770..1153319 684..135 2750 100 Minus
2L 23513712 2L 1152177..1152701 1207..683 2625 100 Minus
2L 23513712 2L 1153386..1153506 135..15 605 100 Minus
2L 23513712 2L 1152035..1152115 1288..1208 405 100 Minus
Blast to na_te.dros performed on 2014-11-26 22:06:29 has no hits.

BO05614.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:30:24 Download gff for BO05614.complete
Subject Subject Range Query Range Percent Splice Strand
capt-RB 1071..2352 9..1292 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:57:00 Download gff for BO05614.complete
Subject Subject Range Query Range Percent Splice Strand
capt-RB 1409..2691 9..1293 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:46:59 Download gff for BO05614.complete
Subject Subject Range Query Range Percent Splice Strand
capt-RB 1421..2692 17..1290 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:30:25 Download gff for BO05614.complete
Subject Subject Range Query Range Percent Splice Strand
capt-RB 1409..2691 9..1293 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:51:26 Download gff for BO05614.complete
Subject Subject Range Query Range Percent Splice Strand
capt-RB 1421..2692 17..1290 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:51:26 Download gff for BO05614.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1152033..1152115 1208..1290 97 <- Minus
2L 1152177..1152700 684..1207 100 <- Minus
2L 1152771..1153318 136..683 100 <- Minus
2L 1153386..1153504 17..135 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:46:59 Download gff for BO05614.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1152033..1152115 1208..1290 97 <- Minus
arm_2L 1152177..1152700 684..1207 100 <- Minus
arm_2L 1152771..1153318 136..683 100 <- Minus
arm_2L 1153386..1153504 17..135 100   Minus

BO05614.pep Sequence

Translation from 16 to 1306

> BO05614.pep
MSVAGFEDIVAGPLSQYLTLSAKIGGDVAQHAELVKSAFGSQLQYVTLAT
QIAQPAQPKQAELLKPTSTQISAIQDFREKHRSSPFFNHLSAISESIPAL
GWVCVEKTPGPYVKEMNDAGQFYTNRVLKEWKEKDVTHVEWARAWVQTLT
ELQAYIRQYHTTGLVWSGKGAAPAGGAPPPPPPGGLPPPPPMLDLSALKL
DSAGDDRSALFAQINQGADITKGLKKVTGDMQTHKNPSLRTGPAPFKSPA
QSGGSKAVAAPSAAQAKAPVFERDGKKWIIEYQKNNTGLLVENAEMNNVV
YVFKCEGSTLTVKGKVNNIVFDSCKKCSLLFDSVVASVEFVNCQSVQMQV
LGSVPTVSIDKTDGCQMYLSKDSLGVEIVNSKSSEMNILLPDDSGDYTEL
ALPEQYKTTIAGKTLKTVCVDSLGASFLDH

BO05614.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:50:42
Subject Length Description Subject Range Query Range Score Percent Strand
capt-PC 424 CG33979-PC 1..424 1..424 2200 100 Plus
capt-PA 424 CG33979-PA 1..424 1..424 2200 100 Plus
capt-PB 783 CG33979-PB 360..783 1..424 2200 100 Plus