Clone Sequence Records
BO05628.3prime Sequence
906 bp (822 high quality bases) assembled on 2005-12-02
> BO05628.3prime
ATGGTCTAGAAAGCTTGCATGCCACGCGAACAGCGAATGCGAAACGAGCA
GATAGCCCGTGGTGACAATGATGCTGCCGATCATGATGGGAAATCCAACT
TTGAAGAACTGCAGGAAGGTGAACTTGTAGCCGTGCTGCTCCGCCACGCC
GGCACAAACCACATTGGCAGAGGCTCCGATCAGAGTGCCATTGCCTCCCA
AACAGGCGCCCAAGGCCAGGGCCCAAACCAGAGGCTGTAGTGGCAGATTC
AAGGTGCTATTCTGCGCCAGTGATATGGTGATCTTGACCATCATCGTGGT
CAGCGGTATGTTGTCCACAAAAGCGGAAGCCACAGCGGAAACCCATAGAA
TGATCAAAATGGCCACCATCAGTCGCCGATCCTCGCCAACTCCCAGGATA
ATGCCCTCTGTCATGTTGCCGATCCACTCAATCAGTCCCAGTTCCGTCAG
GGCTTCCATGAGAATAAACAGAGCTGCGAAGAAGAGCAGCGTGGACCATT
CCACGCGTGCCAGTATGGCCTCCATGTCCTCGATGTCCGCCAGAATGATG
AGGAATATGGCACCCAGCAGAGCGGTCCATCCTAAAGACAGTCTCTGGAG
TTCGGGTACCGAGTGCAGGAAAAACAAACTGATCACAAAGACCAAGGCGG
CCGAACACTTGATCAGCAGCGGTTTGTTGCGAATGGGGTACTTTGCCTGA
AGATTGGCCAGAGTTTGTTGGTAATTGGGTGCCGGTTCTATGACCGCCGT
CATGCGTTTCTTGAGGCTTCTCTTCAAGCGATTCACCTTCTTCATCAGTG
TCTGCCGCACCAGTTCCTCATCCTTGGGATAGGCAGATAGACTGGCGGCT
GCCCGCTTCCATACGTGTATCTCGTGACGCAGTTCCTCCACCTCCGGCGA
GTCCTT
BO05628.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12787-PB | 2439 | hoe1-RB | 1549..2436 | 906..19 | 4415 | 99.8 | Minus |
| CG12787-PF | 2439 | hoe1-RF | 1549..2436 | 906..19 | 4415 | 99.8 | Minus |
| CG12787-PD | 2439 | hoe1-RD | 1549..2436 | 906..19 | 4415 | 99.8 | Minus |
| CG12787-PE | 2439 | hoe1-RE | 1549..2436 | 906..19 | 4415 | 99.8 | Minus |
| CG12787-PA | 2412 | hoe1-RA | 1522..2409 | 906..19 | 4415 | 99.8 | Minus |
| CG12787-PC | 2541 | hoe1-RC | 1651..2538 | 906..19 | 4415 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:21:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hoe1-RJ | 3422 | CG12787-RJ | 1943..2830 | 906..19 | 4425 | 99.9 | Minus |
| hoe1-RI | 3462 | CG12787-RI | 2144..3031 | 906..19 | 4425 | 99.9 | Minus |
| hoe1-RH | 3534 | CG12787-RH | 2216..3103 | 906..19 | 4425 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:21:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4909676..4910027 | 341..692 | 1760 | 100 | Plus |
| 2L | 23513712 | 2L | 4910083..4910298 | 691..906 | 1065 | 99.5 | Plus |
| 2L | 23513712 | 2L | 4909475..4909624 | 194..343 | 750 | 100 | Plus |
| 2L | 23513712 | 2L | 4909315..4909410 | 101..196 | 480 | 100 | Plus |
| 2L | 23513712 | 2L | 4909173..4909254 | 19..100 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 10:21:43 has no hits.
BO05628.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:05 Download gff for
BO05628.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-PD | 1549..2439 | 16..906 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:50:48 Download gff for
BO05628.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12787-PC | 1651..2541 | 16..906 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:56:16 Download gff for
BO05628.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RC | 1861..2748 | 19..906 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:54:29 Download gff for
BO05628.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RH | 2216..3103 | 19..906 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:54:29 Download gff for
BO05628.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4909476..4909623 | 195..342 | 100 | <- | Plus |
| 2L | 4909678..4910025 | 343..690 | 100 | <- | Plus |
| 2L | 4910083..4910298 | 691..906 | 99 | | Plus |
| 2L | 4909173..4909254 | 19..100 | 100 | <- | Plus |
| 2L | 4909315..4909408 | 101..194 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:56:16 Download gff for
BO05628.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4909173..4909254 | 19..100 | 100 | <- | Plus |
| arm_2L | 4909315..4909408 | 101..194 | 100 | <- | Plus |
| arm_2L | 4909476..4909623 | 195..342 | 100 | <- | Plus |
| arm_2L | 4909678..4910025 | 343..690 | 100 | <- | Plus |
| arm_2L | 4910083..4910298 | 691..906 | 99 | | Plus |
BO05628.5prime Sequence
943 bp (830 high quality bases) assembled on 2005-12-02
> BO05628.5prime
GAAGTTATCAGTCGACATGGCCTACAATCCCAACAGCAGCGCCGAGGATA
ACGCATACGAGGATGACGAAGTAACAGAAGGTGCCTTACAGGTCTGGCGG
ACCCTGCCGGAGCGCATTCGTCAGGATCCCAGTCTAGCCTCCTTTCGCCA
GGAGCACGAACGTCTGCATGGCGATGTGGACCAGCTGCACGCGGAGGAGT
CGGAATTGCGTGTGCAGAATGGACACCACGAGGAGACGGCGCTGGCCAAC
CAGCCATTCACACAGATCGGGATCAATGTGACGAACGAGGCGGGTCAGGT
GCGGGTGCTCGATGGCAGGGATCTGGAGAATAACAACGATGATCAACACG
ACGAGGCCGAGCCGCATGCCAAGAGTTTGATACGAAAGTATCTCATCTGG
TTTAAGATAGCCATACTCCTGGTGGTCTGGTGCGTCTTCACCGCCTTCCT
GATGTCCAACAACGAGCATGTGGACCAACTGAGCCTCATTAGTGTTCCTA
GGAATAGCTCACCCAGAGTATTTCCCATTGCCACCGCCAGTCTGCAGAGG
ATTGGCCTGGGCCTGCGCGGACCCTTCCGCCTGCAGGAGAACGAACTGGC
CATTAACGCGAGTGTTCCACTGCCCCTGCTCCAGGTGCAGGTGATGCGCA
GCTATTTCGATGGCGAGGGCATGGAGATCTACATCGAGAACGCCAGCCAG
GTGTGGCAACTGGACGTGGTCTATCCCGATCTGATAGACGCCACCAGGGA
TACGAAGAAGCAGCGTACCTTCGAGCTGAGTCCCACTGATCCCTTATGGT
TGGCCCAGGCCAATCGCACGGAGCTGAGCTTCGAGTTCACCAGCTCCATT
GAGGGCGAATTGCCGCTCCAACTGAATGTGGATGAGTCGCCCATCTATAA
GCGGGATGGAGTCATCTATGCTGCGGCTGTGCTCTGCGGCTTG
BO05628.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12787-PA | 2412 | hoe1-RA | 1..927 | 17..943 | 4635 | 100 | Plus |
| CG12787-PB | 2439 | hoe1-RB | 77..954 | 66..943 | 4390 | 100 | Plus |
| CG12787-PF | 2439 | hoe1-RF | 77..954 | 66..943 | 4390 | 100 | Plus |
| CG12787-PD | 2439 | hoe1-RD | 77..954 | 66..943 | 4390 | 100 | Plus |
| CG12787-PE | 2439 | hoe1-RE | 77..954 | 66..943 | 4390 | 100 | Plus |
| CG12787-PC | 2541 | hoe1-RC | 180..1056 | 67..943 | 4385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:43:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hoe1-RA | 3246 | CG12787-RA | 407..1333 | 17..943 | 4635 | 100 | Plus |
| hoe1-RI | 3462 | CG12787-RI | 672..1549 | 66..943 | 4390 | 100 | Plus |
| hoe1-RE | 3512 | CG12787-RE | 722..1599 | 66..943 | 4390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:43:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4910949..4911513 | 943..379 | 2825 | 100 | Minus |
| 2L | 23513712 | 2L | 4911722..4911868 | 319..173 | 735 | 100 | Minus |
| 2L | 23513712 | 2L | 4912672..4912778 | 173..67 | 535 | 100 | Minus |
| 2L | 23513712 | 2L | 4911581..4911645 | 379..315 | 325 | 100 | Minus |
| 2L | 23513712 | 2L | 4915047..4915096 | 66..17 | 250 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 06:43:55 has no hits.
BO05628.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:06 Download gff for
BO05628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-PA | 1..927 | 17..943 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:50:50 Download gff for
BO05628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12787-PA | 1..927 | 17..943 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:29:51 Download gff for
BO05628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RA | 404..1333 | 10..943 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:22:13 Download gff for
BO05628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RA | 404..1333 | 10..943 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:22:13 Download gff for
BO05628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4910949..4911512 | 380..943 | 100 | <- | Minus |
| 2L | 4911581..4911641 | 319..379 | 100 | <- | Minus |
| 2L | 4911723..4911867 | 174..318 | 100 | <- | Minus |
| 2L | 4912672..4912778 | 67..173 | 100 | <- | Minus |
| 2L | 4915047..4915099 | 10..66 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:29:51 Download gff for
BO05628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4910949..4911512 | 380..943 | 100 | <- | Minus |
| arm_2L | 4911581..4911641 | 319..379 | 100 | <- | Minus |
| arm_2L | 4911723..4911867 | 174..318 | 100 | <- | Minus |
| arm_2L | 4912672..4912778 | 67..173 | 100 | <- | Minus |
| arm_2L | 4915047..4915099 | 10..66 | 92 | | Minus |
BO05628.complete Sequence
2443 bp assembled on 2008-08-14
GenBank Submission: FJ630100
> BO05628.complete
GAAGTTATCAGTCGACATGGCCTACAATCCCAACAGCAGCGCCGAGGATA
ACGCATACGAGGATGACGAAGTAACAGAAGGTGCCTTACAGGTCTGGCGG
ACCCTGCCGGAGCGCATTCGTCAGGATCCCAGTCTAGCCTCCTTTCGCCA
GGAGCACGAACGTCTGCATGGCGATGTGGACCAGCTGCACGCGGAGGAGT
CGGAATTGCGTGTGCAGAATGGACACCACGAGGAGACGGCGCTGGCCAAC
CAGCCATTCACACAGATCGGGATCAATGTGACGAACGAGGCGGGTCAGGT
GCGGGTGCTCGATGGCAGGGATCTGGAGAATAACAACGATGATCAACACG
ACGAGGCCGAGCCGCATGCCAAGAGTTTGATACGAAAGTATCTCATCTGG
TTTAAGATAGCCATACTCCTGGTGGTCTGGTGCGTCTTCACCGCCTTCCT
GATGTCCAACAACGAGCATGTGGACCAACTGAGCCTCATTAGTGTTCCTA
GGAATAGCTCACCCAGAGTATTTCCCATTGCCACCGCCAGTCTGCAGAGG
ATTGGCCTGGGCCTGCGCGGACCCTTCCGCCTGCAGGAGAACGAACTGGC
CATTAACGCGAGTGTTCCACTGCCCCTGCTCCAGGTGCAGGTGATGCGCA
GCTATTTCGATGGCGAGGGCATGGAGATCTACATCGAGAACGCCAGCCAG
GTGTGGCAACTGGACGTGGTCTATCCCGATCTGATAGACGCCACCAGGGA
TACGAAGAAGCAGCGTACCTTCGAGCTGAGTCCCACTGATCCCTTATGGT
TGGCCCAGGCCAATCGCACGGAGCTGAGCTTCGAGTTCACCAGCTCCATT
GAGGGCGAATTGCCGCTCCAACTGAATGTGGATGAGTCGCCCATCTATAA
GCGGGATGGAGTCATCTATGCTGCGGCTGTGCTCTGCGGCTTGTACGTGA
TGATCATCTGGGAGATTGTGAATCGAACCTTTGCTGCCATCATCGCATCC
ACCTTGTCGGTTGGTATACTGGCTGCACTGAACTCCAGGCCCTCGATGGC
CACCATCATGGGTTGGATTGATGTGGAGACACTGCTGCTGCTCTTCGGCA
TGATGATTCTGGTGGCCATTCTCTCCGAGACGGGAGTCTTTGACTATCTG
GCTGTGTATGCCTACAAGATAACCAACGGACATGTTTGGCCACTCATCAA
TTGCCTCTGCCTGTTCACCGCTGTCCTGTCGTCCTTCCTGGACAATGTGA
CCACCGTGCTGCTGATGACCCCGGTGACGATACGACTCTGCGAGGTCATG
TGCCTCAATCCGGTGCCCATACTCATGTGCATGGTCATCTACTCGAACAT
TGGCGGTGCACTGACTCCAGTGGGGGATCCGCCCAATGTCATCATAGCCT
CGAATAGCTACATATCCAAAAATGGCGTCAATTTTGCTGTCTTCACCTTG
CACATGCTGCCCGGAGTTCTGCTGGTGATGGTGCAGACCTATATCCAGTT
GCGTTTCAAGTTTCGCAACATCAGTGATCTGCAGTTCAAGGACTCGCCGG
AGGTGGAGGAACTGCGTCACGAGATACACGTATGGAAGCGGGCAGCCGCC
AGTCTATCTGCCTATTCCAAGGATGAGGAACTGGTGCGGCAGACACTGAT
GAAGAAGGTGAATCGCTTGAAGAGAAGCCTCAAGAAACGCATGACGGCGG
TCATAGAACCGGCACCCAATTACCAACAAACTCTGGCCAATCTTCAGGCA
AAGTACCCCATTCGCAACAAACCGCTGCTGATCAAGTGTTCGGCCGCCTT
GGTCTTTGTGATCAGTTTGTTTTTCCTGCACTCGGTACCCGAACTCCAGA
GACTGTCTTTAGGATGGACCGCTCTGCTGGGTGCCATATTCCTCATCATT
CTGGCGGACATCGAGGACATGGAGGCCATACTGGCACGCGTGGAATGGTC
CACGCTGCTCTTCTTCGCAGCTCTGTTTATTCTCATGGAAGCCCTGACGG
AACTGGGACTGATTGAGTGGATCGGCAACATGACAGAGGGCATTATCCTG
GGAGTTGGCGAGGATCGGCGACTGATGGTGGCCATTTTGATCATTCTATG
GGTTTCCGCTGTGGCTTCCGCTTTTGTGGACAACATACCGCTGACCACGA
TGATGGTCAAGATCACCATATCACTGGCGCAGAATAGCACCTTGAATCTG
CCACTACAGCCTCTGGTTTGGGCCCTGGCCTTGGGCGCCTGTTTGGGAGG
CAATGGCACTCTGATCGGAGCCTCTGCCAATGTGGTTTGTGCCGGCGTGG
CGGAGCAGCACGGCTACAAGTTCACCTTCCTGCAGTTCTTCAAAGTTGGA
TTTCCCATCATGATCGGCAGCATCATTGTCACCACGGGCTATCTGCTCGT
TTCGCATTCGCTGTTCGCGTGGCATGCAAGCTTTCTAGACCAT
BO05628.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:21:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hoe1-RA | 2412 | CG12787-PA | 1..2409 | 17..2425 | 12045 | 100 | Plus |
| hoe1-RI | 2439 | CG12787-PI | 77..2436 | 66..2425 | 11800 | 100 | Plus |
| hoe1-RE | 2439 | CG12787-PE | 77..2436 | 66..2425 | 11800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:21:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hoe1-RA | 3246 | CG12787-RA | 407..2815 | 17..2425 | 12045 | 100 | Plus |
| hoe1-RI | 3462 | CG12787-RI | 672..3031 | 66..2425 | 11800 | 100 | Plus |
| hoe1-RE | 3512 | CG12787-RE | 722..3081 | 66..2425 | 11800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:21:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4910468..4911513 | 1424..379 | 5230 | 100 | Minus |
| 2L | 23513712 | 2L | 4909676..4910027 | 2103..1752 | 1760 | 100 | Minus |
| 2L | 23513712 | 2L | 4910083..4910412 | 1753..1424 | 1650 | 100 | Minus |
| 2L | 23513712 | 2L | 4909475..4909624 | 2250..2101 | 750 | 100 | Minus |
| 2L | 23513712 | 2L | 4911722..4911868 | 319..173 | 735 | 100 | Minus |
| 2L | 23513712 | 2L | 4912672..4912778 | 173..67 | 535 | 100 | Minus |
| 2L | 23513712 | 2L | 4909315..4909410 | 2343..2248 | 480 | 100 | Minus |
| 2L | 23513712 | 2L | 4909173..4909254 | 2425..2344 | 410 | 100 | Minus |
| 2L | 23513712 | 2L | 4911581..4911645 | 379..315 | 325 | 100 | Minus |
| 2L | 23513712 | 2L | 4915047..4915096 | 66..17 | 250 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 07:21:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 3106..3166 | 1427..1367 | 125 | 67.2 | Minus |
BO05628.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:36:41 Download gff for
BO05628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RA | 398..2809 | 10..2425 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:12:56 Download gff for
BO05628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RA | 407..2815 | 17..2427 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:59:48 Download gff for
BO05628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RA | 401..2809 | 17..2427 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:08:56 Download gff for
BO05628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hoe1-RA | 407..2815 | 17..2427 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:08:56 Download gff for
BO05628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4909170..4909254 | 2344..2427 | 97 | <- | Minus |
| 2L | 4909315..4909408 | 2250..2343 | 100 | <- | Minus |
| 2L | 4909476..4909623 | 2102..2249 | 100 | <- | Minus |
| 2L | 4909678..4910025 | 1754..2101 | 100 | <- | Minus |
| 2L | 4910083..4910412 | 1424..1753 | 100 | <- | Minus |
| 2L | 4910469..4911512 | 380..1423 | 100 | <- | Minus |
| 2L | 4911581..4911641 | 319..379 | 100 | <- | Minus |
| 2L | 4911723..4911867 | 174..318 | 100 | <- | Minus |
| 2L | 4912672..4912778 | 67..173 | 100 | <- | Minus |
| 2L | 4915047..4915096 | 17..66 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:12:56 Download gff for
BO05628.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4909170..4909254 | 2344..2427 | 97 | <- | Minus |
| arm_2L | 4909315..4909408 | 2250..2343 | 100 | <- | Minus |
| arm_2L | 4909476..4909623 | 2102..2249 | 100 | <- | Minus |
| arm_2L | 4909678..4910025 | 1754..2101 | 100 | <- | Minus |
| arm_2L | 4910083..4910412 | 1424..1753 | 100 | <- | Minus |
| arm_2L | 4910469..4911512 | 380..1423 | 100 | <- | Minus |
| arm_2L | 4911581..4911641 | 319..379 | 100 | <- | Minus |
| arm_2L | 4911723..4911867 | 174..318 | 100 | <- | Minus |
| arm_2L | 4912672..4912778 | 67..173 | 100 | <- | Minus |
| arm_2L | 4915047..4915096 | 17..66 | 100 | | Minus |
BO05628.pep Sequence
Translation from 16 to 2443
> BO05628.pep
MAYNPNSSAEDNAYEDDEVTEGALQVWRTLPERIRQDPSLASFRQEHERL
HGDVDQLHAEESELRVQNGHHEETALANQPFTQIGINVTNEAGQVRVLDG
RDLENNNDDQHDEAEPHAKSLIRKYLIWFKIAILLVVWCVFTAFLMSNNE
HVDQLSLISVPRNSSPRVFPIATASLQRIGLGLRGPFRLQENELAINASV
PLPLLQVQVMRSYFDGEGMEIYIENASQVWQLDVVYPDLIDATRDTKKQR
TFELSPTDPLWLAQANRTELSFEFTSSIEGELPLQLNVDESPIYKRDGVI
YAAAVLCGLYVMIIWEIVNRTFAAIIASTLSVGILAALNSRPSMATIMGW
IDVETLLLLFGMMILVAILSETGVFDYLAVYAYKITNGHVWPLINCLCLF
TAVLSSFLDNVTTVLLMTPVTIRLCEVMCLNPVPILMCMVIYSNIGGALT
PVGDPPNVIIASNSYISKNGVNFAVFTLHMLPGVLLVMVQTYIQLRFKFR
NISDLQFKDSPEVEELRHEIHVWKRAAASLSAYSKDEELVRQTLMKKVNR
LKRSLKKRMTAVIEPAPNYQQTLANLQAKYPIRNKPLLIKCSAALVFVIS
LFFLHSVPELQRLSLGWTALLGAIFLIILADIEDMEAILARVEWSTLLFF
AALFILMEALTELGLIEWIGNMTEGIILGVGEDRRLMVAILIILWVSAVA
SAFVDNIPLTTMMVKITISLAQNSTLNLPLQPLVWALALGACLGGNGTLI
GASANVVCAGVAEQHGYKFTFLQFFKVGFPIMIGSIIVTTGYLLVSHSLF
AWHASFLDH
BO05628.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:19:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hoe1-PA | 803 | CG12787-PA | 1..803 | 1..803 | 4094 | 100 | Plus |
| hoe1-PI | 812 | CG12787-PI | 16..812 | 7..803 | 4009 | 98.9 | Plus |
| hoe1-PE | 812 | CG12787-PE | 16..812 | 7..803 | 4009 | 98.9 | Plus |
| hoe1-PD | 812 | CG12787-PD | 16..812 | 7..803 | 4009 | 98.9 | Plus |
| hoe1-PF | 812 | CG12787-PF | 16..812 | 7..803 | 4009 | 98.9 | Plus |
