Clone BO05630 Report

Search the DGRC for BO05630

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:56
Well:30
Vector:pDNR-Dual
Associated Gene/TranscriptCG8611-RA
Protein status:BO05630.pep: Imported from assembly
Sequenced Size:2956

Clone Sequence Records

BO05630.3prime Sequence

861 bp (860 high quality bases) assembled on 2005-12-02

> BO05630.3prime
ATGGTCTAGAAAGCTTGCCGCCTGCTTGCGTCGCTTGGCGGCTCCCTCCG
GTGGCAGTCCGCTGTCGAACTCGGACATATTCAGCGCCCTCGATTTGCCC
AGGCTCTTCATGAAGCTGCTGCGTCCCACTCCGCCGCCAATGAAACCACC
CTTGGGTGGTGGGGCTCCTGGCTTCTGCGCTCCTACGTCCCGCTGCTGCA
GCTGTCGCACCTCCCCGCTGACCGTCGTCGTGAATCGCCGCTTGGCCCGC
TTCTGGGCCTGGATCTTCTCGGGATCTCTCTCCGTGTAGGTCAGTCGGTT
GGTGGGCGGGGCCGCCTTGGGGGCGGCGTGCTTGGCGGCGAACTTTGAGG
GCGCCTCCTTGAGCGCAAAGCTCTTGGCGAAGTGGCCCATGTGGGCGATG
CGCACGTTGAAGATGGGCTTCAGCTCCTTGGGAAACGTCGAGTAGAACTT
CATCCAGGACACAAAGGCTTTGCAGGACTTGTCGTGTAGTTCGCGATCAT
CCTCGAGCAGCGTCTGGAACTTGTGCTGCAGATTGGAGGCCGCCTCCTGC
ACCGTCCTGGCCTCATCGTCCTTGGGCAGCAGGGTCTGCAGGTAGGCGTA
CATGTCGCCCTGCTGGATGCGGATGCGCTTCTTCTCCAGATGCCGCACGA
ACTGGGCCTCGCTGGGCGTCAGGAAGAGCACGGCTCTGCCCTTTCGGCCC
GCTCGAGCCGTTCGACCCACGCGGTGAACAAAATCGGCGGTGGTTTGCGG
CGGCGTGTACTGCACCACCAGTTTTATGTCGGGAACATCGATGCCACGAC
CCACCACATCGGTGGCCAGCANGACGCAGCTGGCGCAATCGCGGAAGCCA
CGAAAAACGCC

BO05630.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG8611-PA 2925 CG8611-RA 2080..2922 861..19 4196 99.8 Minus
CG8611-PB 2928 CG8611-RB 2083..2925 861..19 4196 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:45:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG8611-RB 4145 CG8611-RB 2186..3028 861..19 4204 99.9 Minus
CG8611-RA 3614 CG8611-RA 2183..3025 861..19 4204 99.9 Minus
CG8611-RC 3917 CG8611-RC 2879..3328 468..19 2250 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:45:30
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17419448..17419841 468..861 1959 99.7 Plus
X 23542271 X 17414384..17414644 19..279 1305 100 Plus
X 23542271 X 17414970..17415161 278..469 960 100 Plus
Blast to na_te.dros performed on 2015-02-04 19:45:35 has no hits.

BO05630.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:08 Download gff for BO05630.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8611-PB 2083..2928 18..861 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:50:54 Download gff for BO05630.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8611-PB 2083..2928 18..861 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:20:04 Download gff for BO05630.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8611-RA 2183..3025 19..861 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:41:30 Download gff for BO05630.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8611-RA 2183..3025 19..861 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:41:30 Download gff for BO05630.3prime
Subject Subject Range Query Range Percent Splice Strand
X 17414384..17414642 19..277 100 <- Plus
X 17414970..17415159 278..467 100 <- Plus
X 17419448..17419841 468..861 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:20:04 Download gff for BO05630.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17308417..17308675 19..277 100 <- Plus
arm_X 17309003..17309192 278..467 100 <- Plus
arm_X 17313481..17313874 468..861 99   Plus

BO05630.5prime Sequence

923 bp (761 high quality bases) assembled on 2005-12-02

> BO05630.5prime
GAAGTTATCAGTCGACATGGTGGAAAATATATCACTGAATGTTACTGTAA
AGTCGTCGGCTCGGAAAAATCAACAGTCGCCCGCGCTTTCGGTTAAAAAA
CGTGCACAGAAATCCCAGGATTTCGACTTTCAATTCAATGTGGACAAGCC
CAAAGTCAAGGCAATCGTTGTGCGAAGAAGGGCGCCTCCTTCGAAAGTTG
AACCTACAAATTCATCAGTTCCCAATACCACGAAATCGCCGACGCCTTCA
GTTTCCTCCAGCAAATCCGCAATTTCCACTCTTTCAGCATCCCCCAAAGC
AAATGCATCCAACGATGATCTTATGTTCAATGTTAGCCCAACGAAACCAC
CTGTTAAGAGCGTTTTAGGCGACGATTTCATGCTAAATGTGACCACAAAG
CCGGTGGTTGCCCAGAAAGCCAAGCCAAAAATCACACGAGCCGAAAGATT
GGGCAAGAAACAGAGGCAGGGCAAGCCACTGACGAAGCTCAGCGAAGAGC
AGATCACGCGGGCGCTGAAGAGCAACAAAAAGCCAAAAAATCCAAATCAA
TTACCCACGCCCGGTGACCTTTTCCGCGCTCAACTGGAGGAGGAGAGGCG
GCAAAAGCGTCGTGAAGAGGGAGGAGGGGATCAGGAAGCCAGCGCCGATG
AGGAGGATGCGAAGAACAACTCAGGAGGGGGATCTCCGAGGGTAAAACCG
AGTTCAGCCGTTAAGGAGTCCAAAAAGTCATCAGATATTGAGGATTCCGG
CGAATCCGGCGAAGAATCTGCAACATCCGATGAGGAACCAGATGAATCCA
GTGCACAATCTCCTGGACAAGAAAAGGAACCCAAACAAACCGCGAAGAAA
CCACCGAAAGCCGAGGAAACCTCGTCCACAAACCGTTTTCGCACCAAAAA
ATCGGCCTCTTCAACAAAGCGAA

BO05630.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG8611-PA 2925 CG8611-RA 1..881 17..897 4405 100 Plus
CG8611-PB 2928 CG8611-RB 61..884 74..897 4120 100 Plus
CG8611-PB 2928 CG8611-RB 1..60 17..76 300 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:53:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG8611-RA 3614 CG8611-RA 104..1011 17..922 4460 99.6 Plus
CG8611-RC 3917 CG8611-RC 104..1014 17..922 4420 99.2 Plus
CG8611-RB 4145 CG8611-RB 104..1014 17..922 4420 99.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:53:57
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17421084..17421927 912..70 4140 99.6 Minus
X 23542271 X 17421983..17422042 76..17 300 100 Minus
Blast to na_te.dros performed on 2015-02-11 04:53:58 has no hits.

BO05630.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:09 Download gff for BO05630.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8611-PA 1..907 17..921 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:50:55 Download gff for BO05630.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8611-PA 1..907 17..921 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:15:41 Download gff for BO05630.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8611-RA 104..1011 17..923 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:38:57 Download gff for BO05630.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8611-RA 104..1011 17..923 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:38:57 Download gff for BO05630.5prime
Subject Subject Range Query Range Percent Splice Strand
X 17421072..17421920 77..923 99 <- Minus
X 17421983..17422042 17..76 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:15:41 Download gff for BO05630.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17315105..17315953 77..923 99 <- Minus
arm_X 17316016..17316075 17..76 100   Minus

BO05630.complete Sequence

2956 bp assembled on 2008-11-10

GenBank Submission: KX799895

> BO05630.complete
GAAGTTATCAGTCGACATGGTGGAAAATATATCACTGAATGTTACTGTAA
AGTCGTCGGCTCGGAAAAATCAACAGTCGCCCGCGCTTTCGGTTAAAAAA
CGTGCACAGAAATCCCAGGATTTCGACTTTCAATTCAATGTGGACAAGCC
CAAAGTCAAGGCAATCGTTGTGCGAAGAAGGGCGCCTCCTTCGAAAGTTG
AACCTACAAATTCATCAGTTCCCAATACCACGAAATCGCCGACGCCTTCA
GTTTCCTCCAGCAAATCCGCAATTTCCACTCTTTCAGCATCCCCCAAAGC
AAATGCATCCAACGATGATCTTATGTTCAATGTTAGCCCAACGAAACCAC
CTGTTAAGAGCGTTTTAGGCGACGATTTCATGCTAAATGTGACCACAAAG
CCGGTGGTTGCCCAGAAAGCCAAGCCAAAAATCACACGAGCCGAAAGATT
GGGCAAGAAACAGAGGCAGGGCAAGCCACTGACGAAGCTCAGCGAAGAGC
AGATCACGCGGGCGCTGAAGAGCAACAAAAAGCCAAAAAATCCAAATCAA
TTACCCACGCCCGGTGACCTTTTCCGCGCTCAACTGGAGGAGGAGAGGCG
GCAAAAGCGTCGTGAAGAGGGAGGAGGGGATCAGGAAGCCAGCGCCGATG
AGGAGGATGCGAAGAACAACTCAGGAGGGGGATCTCCGAGGGTAAAACCG
AGTTCAGCCGTTAAGGAGTCCAAAAAGTCATCAGATATTGAGGATTCCGG
CGAATCCGGCGAAGAATCTGCAACATCCGATGAGGAACCAGATGAATCCA
GTGCACAATCTCCTGGACAAGAAAAGGAACCCAAACAAACCGCGAAGAAA
CCACCGAAAGCCGAGGAAACCTCGTCCACAAACCGTTTTCGCACCAAGAA
GATCGGCCTCTTCGACCAAAGCGACGTGGAGGCACTCAAGCAACTGGGCC
AAAGAGCGGTGAAGCCCGTCAAGGAGACCATCTTTACAGGCTCTAAAATA
TCCACGTTGGGACTGCATCCTCATGCTGTAAAGAACTTGGAGGATCTGCT
TAGCATTCGAGAGCTAACTAGCGTGCAGCAGAAGACCATTCCCGAAGTTC
TCCAGGGCAAGGATGTGCTCGTACGTTCGCAGACGGGCTCGGGAAAGACC
CTGGCATATGCTCTACCCTTGGTGGAACTGTTGCAGAAACAGCAGCCACG
GATACAGCGAAAGGATGGCGTGCTGGCCCTGGTGATTGTACCCACCAGGG
AGCTGGTGATGCAGACATACGAACTCATCCAGAAGCTGGTCAAGCCGTAC
ACATGGATAGTGCCCGGTTCTTTGCTGGGTGGCGAGAGCAGGAAAAGCGA
AAAGGCCAGGCTAAGAAAGGGCATCAACATACTGATAGGCACACCTGGTC
GTCTGGTGGATCACCTGCTGCACACGGCCTCCTTCAAGCTGACCAAACTG
CAGTTCCTCATACTGGACGAAGCAGATCGCCTGCTGGAGCTGGGCTACGA
ACGCGATGTCAAGCAGTTGGTGGAGGCCATTGACAAGCAGCGTGCGGAGT
GCGAGGACAAGGAGCTTCCCCAGCTGCAAAGGATGCTGCTGAGTGCCACT
TTGACTTCGCAGGTCCAACAGCTGGCCGGTTTGACCCTCAAGAATCCCCT
GTACATAGACAACAGCGACGAGGCGGCGAGTGCGGCGCTGAAGAGCAAGG
ATGGCTACCAAAAGGAGACCATAGAAGCCTTGCTAGAGGTGGACGACGGA
CTGGGCGAGTACCAGGAGGATGTGACGGGTGTGCTGAGTATTCCCGAGAA
CCTGCAGCTCAGCTATGTGGTGGTGCCGCCAAAACTACGTCTGGTGGCAC
TGTCTTCGCTGCTGGCCAAGGAAGTGGACGCCAGTCCCAAGCAGTTCAAG
GCGATTGTGTTCATGAGCACCACGGAGATGGTGAACTTCCATCACGACAT
GCTCAACGAGGCGTTGACCAGGCGAGTTCTCGACGAGGAGGACGAGCAGG
AGAAAGGTGATTCGGATGACGACGGCGACATACCTTTACTGCAGGGTCTG
CGCTTCTTCAAACTACATGGCTCCATGACGCAGACGGAACGGCAGGGCGT
TTTTCGTGGCTTCCGCGATTGCGCCAGCTGCGTCCTGCTGGCCACCGATG
TGGTGGGTCGTGGCATCGATGTTCCCGACATAAAACTGGTGGTGCAGTAC
ACGCCGCCGCAAACCACCGCCGATTTTGTTCACCGCGTGGGTCGAACGGC
TCGAGCGGGCCGAAAGGGCAGAGCCGTGCTCTTCCTGACGCCCAGCGAGG
CCCAGTTCGTGCGGCATCTGGAGAAGAAGCGCATCCGCATCCAGCAGGGC
GACATGTACGCCTACCTGCAGACCCTGCTGCCCAAGGACGATGAGGCCAG
GACGGTGCAGGAGGCGGCCTCCAATCTGCAGCACAAGTTCCAGACGCTGC
TCGAGGATGATCGCGAACTACACGACAAGTCCTGCAAAGCCTTTGTGTCC
TGGATGAAGTTCTACTCGACGTTTCCCAAGGAGCTGAAGCCCATCTTCAA
CGTGCGCATCGCCCACATGGGCCACTTCGCCAAGAGCTTTGCGCTCAAGG
AGGCGCCCTCAAAGTTCGCCGCCAAGCACGCCGCCCCCAAGGCGGCCCCG
CCCACCAACCGACTGACCTACACGGAGAGAGATCCCGAGAAGATCCAGGC
CCAGAAGCGGGCCAAGCGGCGATTCACGACGACGGTCAGCGGGGAGGTGC
GACAGCTGCAGCAGCGGGACGTAGGAGCGCAGAAGCCAGGAGCCCCACCA
CCCAAGGGTGGTTTCATTGGCGGCGGAGTGGGACGCAGCAGCTTCATGAA
GAGCCTGGGCAAATCGAGGGCGCTGAATATGTCCGAGTTCGACAGCGGAC
TGCCACCGGAGGGAGCCGCCAAGCGACGCAAGCAGGCGGCAAGCTTTCTA
GACCAT

BO05630.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:55:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG8611-RA 2925 CG8611-PA 1..2922 17..2938 14610 100 Plus
CG8611-RB 2928 CG8611-PB 1..2925 17..2938 14545 99.9 Plus
CG8611-RC 2487 CG8611-PC 1..2476 17..2489 12300 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:55:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG8611-RA 3614 CG8611-RA 104..3025 17..2938 14610 100 Plus
CG8611-RB 4145 CG8611-RB 104..3028 17..2938 14545 99.9 Plus
CG8611-RC 3917 CG8611-RC 104..2579 17..2489 12300 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:55:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17419936..17421927 2061..70 9945 99.9 Minus
X 23542271 X 17419448..17419875 2489..2062 2140 100 Minus
X 23542271 X 17414384..17414644 2938..2678 1305 100 Minus
X 23542271 X 17414970..17415161 2679..2488 960 100 Minus
X 23542271 X 17421983..17422042 76..17 300 100 Minus
Blast to na_te.dros performed on 2014-11-27 19:55:21 has no hits.

BO05630.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:49:06 Download gff for BO05630.complete
Subject Subject Range Query Range Percent Splice Strand
CG8611-RA 114..3035 17..2938 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:00:49 Download gff for BO05630.complete
Subject Subject Range Query Range Percent Splice Strand
CG8611-RA 104..3025 17..2940 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:59:35 Download gff for BO05630.complete
Subject Subject Range Query Range Percent Splice Strand
CG8611-RA 114..3035 17..2940 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:10:49 Download gff for BO05630.complete
Subject Subject Range Query Range Percent Splice Strand
CG8611-RA 104..3025 17..2940 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:10:49 Download gff for BO05630.complete
Subject Subject Range Query Range Percent Splice Strand
X 17414382..17414642 2680..2940 99 <- Minus
X 17414970..17415159 2490..2679 100 <- Minus
X 17419448..17419875 2062..2489 100 <- Minus
X 17419936..17421920 77..2061 100 <- Minus
X 17421983..17422042 17..76 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:00:49 Download gff for BO05630.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17308415..17308675 2680..2940 99 <- Minus
arm_X 17309003..17309192 2490..2679 100 <- Minus
arm_X 17313481..17313908 2062..2489 100 <- Minus
arm_X 17313969..17315953 77..2061 100 <- Minus
arm_X 17316016..17316075 17..76 100   Minus

BO05630.pep Sequence

Translation from 16 to 2956

> BO05630.pep
MVENISLNVTVKSSARKNQQSPALSVKKRAQKSQDFDFQFNVDKPKVKAI
VVRRRAPPSKVEPTNSSVPNTTKSPTPSVSSSKSAISTLSASPKANASND
DLMFNVSPTKPPVKSVLGDDFMLNVTTKPVVAQKAKPKITRAERLGKKQR
QGKPLTKLSEEQITRALKSNKKPKNPNQLPTPGDLFRAQLEEERRQKRRE
EGGGDQEASADEEDAKNNSGGGSPRVKPSSAVKESKKSSDIEDSGESGEE
SATSDEEPDESSAQSPGQEKEPKQTAKKPPKAEETSSTNRFRTKKIGLFD
QSDVEALKQLGQRAVKPVKETIFTGSKISTLGLHPHAVKNLEDLLSIREL
TSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKD
GVLALVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLR
KGINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQ
LVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTLKNPLYIDNS
DEAASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSY
VVVPPKLRLVALSSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEAL
TRRVLDEEDEQEKGDSDDDGDIPLLQGLRFFKLHGSMTQTERQGVFRGFR
DCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVHRVGRTARAGRK
GRAVLFLTPSEAQFVRHLEKKRIRIQQGDMYAYLQTLLPKDDEARTVQEA
ASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELKPIFNVRIAH
MGHFAKSFALKEAPSKFAAKHAAPKAAPPTNRLTYTERDPEKIQAQKRAK
RRFTTTVSGEVRQLQQRDVGAQKPGAPPPKGGFIGGGVGRSSFMKSLGKS
RALNMSEFDSGLPPEGAAKRRKQAASFLDH

BO05630.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:27:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG8611-PA 974 CG8611-PA 1..974 1..974 4908 100 Plus
CG8611-PB 975 CG8611-PB 1..975 1..974 4896 99.9 Plus
CG8611-PC 828 CG8611-PC 1..825 1..824 4118 99.9 Plus
pit-PC 680 CG6375-PC 11..645 138..883 689 27.4 Plus
pit-PA 680 CG6375-PA 11..645 138..883 689 27.4 Plus