Clone BO05632 Report

Search the DGRC for BO05632

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:56
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptMP1-RA
Protein status:BO05632.pep: validated full length
Sequenced Size:1204

Clone Sequence Records

BO05632.3prime Sequence

703 bp (680 high quality bases) assembled on 2005-12-02

> BO05632.3prime
ATGGTCTAGAAAGCTTGCAGCCCTAACGTTGTTTTCTATCCAGTTCAGAT
ACGCTTCAACCCTTGTGTACACGCCGGGCCATCCTTTTAGGCCACAGGGC
GTGGGTCCGTAGGAGACCACACCAGCAATGTAGTAGTTTGAGTTTCCATT
GGAGTAGTCCTCGAGCAGAAGGGGGCCACCCGAGTCCCCGCGACAGGAAT
CAACCCCCTCAACTCCGCCGGCGCACATCTGTTTGGTGGTGACAGTCCTT
CTTTGGGTGGCGTATCTTTGGTTGCATTCGGACGTCGGTACCGTATCCAA
CTCAGCCTTCAGCTTGATATTGGACGTAAAATTTGTCTCCGTGCGACCCC
ACCCTGCCACCACCACCTTTCGGCCAAGGAATATATTGTTGTGCTGGGAC
GCTAAAGTGGGCAGACATACTGGTAATATGAAGTCGCTGTACTGAACCTC
GTCCCGCAATCGCAGCAACGCAATGTCATTTAGCTGGTCCCGTGAGTTTC
CCGGGTACTGCGGGTGCGGAATACGCTCCTCAACAGGGTAGTCTACGTAC
GGTTCGTTGCAGTCCCGTCGTCCGTTTTTACCGACTGTGCAATCCGGATT
GGTGCTCGCATCCCACTCACCCAGGCGTACTCCCGTCAGCTCCCAATCAC
TGGGAATAGCCGAGACGCAGTGTGCCGCCGTCAGAACGTAACGATGGTTG
ATT

BO05632.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG1102-PA 1173 CG1102-RA 486..1170 703..19 3425 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:45:49
Subject Length Description Subject Range Query Range Score Percent Strand
MP1-RC 1495 CG1102-RC 592..1276 703..19 3425 100 Minus
MP1-RA 1468 CG1102-RA 565..1249 703..19 3425 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:45:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4308932..4309616 703..19 3425 100 Minus
Blast to na_te.dros performed on 2015-02-04 19:45:46 has no hits.

BO05632.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:12 Download gff for BO05632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1102-PA 486..1173 15..703 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:01 Download gff for BO05632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1102-PA 486..1173 15..703 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:20:06 Download gff for BO05632.3prime
Subject Subject Range Query Range Percent Splice Strand
MP1-RA 565..1256 11..703 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:41:33 Download gff for BO05632.3prime
Subject Subject Range Query Range Percent Splice Strand
MP1-RA 565..1256 11..703 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:41:33 Download gff for BO05632.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 4308932..4309613 22..703 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:20:06 Download gff for BO05632.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 134654..135335 22..703 100 -> Minus

BO05632.5prime Sequence

794 bp (655 high quality bases) assembled on 2005-11-29

> BO05632.5prime
GAAGTTATCAGTCGACATGGAACCGCACTTTTTTTTCACCGTACTGTGGA
TGCTATTGATGGGAACAAGCAGCACTTACGCACAAGAAATCTTTGGGTAT
TGTAGAACGCCTGATGAGAACAGCGGCACCTGCATAAACCTCCGGGAATG
TGGATACCTATTCGAACTGCTTCAAAGCGAAGAGGTTACGGAACAGGACC
GTCGATTTCTGCAAGCCAGCCAATGTGGCTACCGGAATGGACAAGTGCTT
ATTTGCTGTGCAAACAGCCGAATGCGAAACCAGCAACCTCAGTGGGGAAA
TCATCCTCAACCTACTCAGACCACTAAGCCTACAAAACGCTCTGGGACCA
AACTGTTACCAATGGCGCCCAATTGCGGTGAAAACTTTGGAGACCGAGTG
GTGGGTGGTAACGAGACGACAAAGAGGGAGTTTCCTTGGATGGCCCTAAT
AGAGTACACGAAGCCCGGTAACGTGAAAGGTCACCACTGCGGCGGATCTC
TAATCAACCATCGTTACGTTCTGACGGCGGCACACTGCGTCTCGGCTATT
CCCAGTGATTGGGAGCTGACGGGAGTACGCCTGGGTGAGTGGGATGCGAG
CACCAATCCGGATTGCACAGTCGGTAAAAACGGACGACGGGACTGCAACG
AACCGTACGTAGACTACCCTGTTGAGGAGCGTATTCCGCACCCGCAGTAC
CCGGGAAACTCACGGGACCAGCTAAATGACTTTGCGTTGCTGCAATTGCG
GGACGAGGTTCAGTACAGCGACTTCATATTACCAGTATGTCTGC

BO05632.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG1102-PA 1173 CG1102-RA 1..778 17..794 3840 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 11:49:59
Subject Length Description Subject Range Query Range Score Percent Strand
MP1-RA 1468 CG1102-RA 79..857 16..794 3865 99.7 Plus
MP1-RC 1495 CG1102-RC 340..884 250..794 2695 99.6 Plus
MP1-RC 1495 CG1102-RC 79..313 16..250 1175 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 11:49:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4308895..4309224 465..794 1620 99.4 Plus
3R 32079331 3R 4308620..4308833 251..464 1070 100 Plus
3R 32079331 3R 4308262..4308427 85..250 830 100 Plus
3R 32079331 3R 4307986..4308056 16..86 355 100 Plus
Blast to na_te.dros performed on 2015-02-13 11:49:56 has no hits.

BO05632.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:13 Download gff for BO05632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1102-PA 1..778 17..794 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:02 Download gff for BO05632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1102-PA 1..778 17..794 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:45:33 Download gff for BO05632.5prime
Subject Subject Range Query Range Percent Splice Strand
MP1-RA 79..857 16..794 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:14:57 Download gff for BO05632.5prime
Subject Subject Range Query Range Percent Splice Strand
MP1-RA 79..857 16..794 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:14:57 Download gff for BO05632.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 4308895..4309224 465..794 99   Plus
3R 4307986..4308056 16..86 100 -> Plus
3R 4308264..4308427 87..250 100 -> Plus
3R 4308620..4308833 251..464 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:45:33 Download gff for BO05632.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 133708..133778 16..86 100 -> Plus
arm_3R 133986..134149 87..250 100 -> Plus
arm_3R 134342..134555 251..464 100 -> Plus
arm_3R 134617..134946 465..794 99   Plus

BO05632.complete Sequence

1204 bp (1204 high quality bases) assembled on 2005-10-17

GenBank Submission: FJ630103

> BO05632.complete
GAAGTTATCAGTCGACATGGAACCGCACTTTTTTTTCACCGTACTGTGGA
TGCTATTGATGGGAACAAGCAGCACTTACGCACAAGAAATCTTTGGGTAT
TGTAGAACGCCTGATGAGAACAGCGGCACCTGCATAAACCTCCGGGAATG
TGGATACCTATTCGAACTGCTTCAAAGCGAAGAGGTTACGGAACAGGACC
GTCGATTTCTGCAAGCCAGCCAATGTGGCTACCGGAATGGACAAGTGCTT
ATTTGCTGTGCAAACAGCCGAATGCGAAACCAGCAACCTCAGTGGGGAAA
TCATCCTCAACCTACTCAGACCACTAAGCCTACAAAACGCTCTGGGACCA
AACTGTTACCAATGGCGCCCAATTGCGGTGAAAACTTTGGAGACCGAGTG
GTGGGTGGTAACGAGACGACAAAGAGGGAGTTTCCTTGGATGGCCCTAAT
AGAGTACACGAAGCCCGGTAACGTGAAAGGTCACCACTGCGGCGGATCTC
TAATCAACCATCGTTACGTTCTGACGGCGGCACACTGCGTCTCGGCTATT
CCCAGTGATTGGGAGCTGACGGGAGTACGCCTGGGTGAGTGGGATGCGAG
CACCAATCCGGATTGCACAGTCGGTAAAAACGGACGACGGGACTGCAACG
AACCGTACGTAGACTACCCTGTTGAGGAGCGTATTCCGCACCCGCAGTAC
CCGGGAAACTCACGGGACCAGCTAAATGACATTGCGTTGCTGCGATTGCG
GGACGAGGTTCAGTACAGCGACTTCATATTACCAGTATGTCTGCCCACTT
TAGCGTCCCAGCACAACAATATATTCCTTGGCCGAAAGGTGGTGGTGGCA
GGGTGGGGTCGCACGGAGACAAATTTTACGTCCAATATCAAGCTGAAGGC
TGAGTTGGATACGGTACCGACGTCCGAATGCAACCAAAGATACGCCACCC
AAAGAAGGACTGTCACCACCAAACAGATGTGCGCCGGCGGAGTTGAGGGG
GTTGATTCCTGTCGCGGGGACTCGGGTGGCCCCCTTCTGCTCGAGGACTA
CTCCAATGGAAACTCAAACTACTACATTGCTGGTGTGGTCTCCTACGGAC
CCACGCCCTGTGGCCTAAAAGGATGGCCCGGCGTGTACACAAGGGTTGAA
GCGTATCTGAACTGGATAGAAAACAACGTTAGGGCTGCAAGCTTTCTAGA
CCAT

BO05632.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:09:31
Subject Length Description Subject Range Query Range Score Percent Strand
MP1-RA 1173 CG1102-PA 1..1170 17..1186 5850 100 Plus
MP1-RC 1200 CG1102-PC 261..1197 250..1186 4685 100 Plus
MP1-RC 1200 CG1102-PC 1..234 17..250 1170 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:09:32
Subject Length Description Subject Range Query Range Score Percent Strand
MP1-RA 1468 CG1102-RA 79..1249 16..1186 5855 100 Plus
MP1-RC 1495 CG1102-RC 340..1276 250..1186 4685 100 Plus
MP1-RC 1495 CG1102-RC 79..313 16..250 1175 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:09:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4308895..4309616 465..1186 3610 100 Plus
3R 32079331 3R 4308620..4308833 251..464 1070 100 Plus
3R 32079331 3R 4308262..4308427 85..250 830 100 Plus
3R 32079331 3R 4307986..4308056 16..86 355 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:09:30 has no hits.

BO05632.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:30:17 Download gff for BO05632.complete
Subject Subject Range Query Range Percent Splice Strand
MP1-RA 1..1173 17..1190 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:56:52 Download gff for BO05632.complete
Subject Subject Range Query Range Percent Splice Strand
MP1-RA 79..1256 16..1194 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:50:55 Download gff for BO05632.complete
Subject Subject Range Query Range Percent Splice Strand
MP1-RA 80..1249 17..1188 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:30:17 Download gff for BO05632.complete
Subject Subject Range Query Range Percent Splice Strand
MP1-RA 79..1256 16..1194 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:12:07 Download gff for BO05632.complete
Subject Subject Range Query Range Percent Splice Strand
MP1-RA 80..1249 17..1188 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:12:07 Download gff for BO05632.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4307987..4308056 17..86 100 -> Plus
3R 4308264..4308427 87..250 100 -> Plus
3R 4308620..4308833 251..464 100 -> Plus
3R 4308895..4309616 465..1188 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:50:55 Download gff for BO05632.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 133709..133778 17..86 100 -> Plus
arm_3R 133986..134149 87..250 100 -> Plus
arm_3R 134342..134555 251..464 100 -> Plus
arm_3R 134617..135338 465..1188 99   Plus

BO05632.pep Sequence

Translation from 16 to 1204

> BO05632.pep
MEPHFFFTVLWMLLMGTSSTYAQEIFGYCRTPDENSGTCINLRECGYLFE
LLQSEEVTEQDRRFLQASQCGYRNGQVLICCANSRMRNQQPQWGNHPQPT
QTTKPTKRSGTKLLPMAPNCGENFGDRVVGGNETTKREFPWMALIEYTKP
GNVKGHHCGGSLINHRYVLTAAHCVSAIPSDWELTGVRLGEWDASTNPDC
TVGKNGRRDCNEPYVDYPVEERIPHPQYPGNSRDQLNDIALLRLRDEVQY
SDFILPVCLPTLASQHNNIFLGRKVVVAGWGRTETNFTSNIKLKAELDTV
PTSECNQRYATQRRTVTTKQMCAGGVEGVDSCRGDSGGPLLLEDYSNGNS
NYYIAGVVSYGPTPCGLKGWPGVYTRVEAYLNWIENNVRAASFLDH

BO05632.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:50:59
Subject Length Description Subject Range Query Range Score Percent Strand
MP1-PA 390 CG1102-PA 1..390 1..390 2149 100 Plus
MP1-PC 399 CG1102-PC 1..399 1..390 2129 97.7 Plus
ea-PA 392 CG4920-PA 34..392 26..390 1000 51 Plus
ea-PB 261 CG4920-PB 7..261 138..390 807 57.3 Plus
SPE-PA 400 CG16705-PA 25..398 19..388 770 43.5 Plus