Clone Sequence Records
BO05638.3prime Sequence
918 bp (890 high quality bases) assembled on 2005-12-02
> BO05638.3prime
ATGGTCTAGAAAGCTTGCCATTGTGGACATGCGTGCATATCGAATTATCT
GGTCGTGATTCAGGGGGCTGTCGGTGGACAGCTGAACCCTTTGCCACTGC
CTGGTCTCGTTCGATTTCCGGATGGCCTCAACCACAGCCTGAACGTAGAG
GCCGTCCTCAAAGGTGGCCGCTGTGGAAACTGGAGCCTTAACCCAGGAGG
ACTCCTTGCTGCCGAAGGCTTCCTTCAGAGCGCCCACCATCTTGCAGAGT
CCTTTGATATATGGTCGTGGTAGCAAAGAGTTGTTGGTGGCGAAGTGCAA
ATCCTGGACATCCACGTAAACAGCTTCCTCTTTGGGTTGGCCCTCCTTGA
GGACAAATAGGTCGCCGCCGCGGACCACCAGGTGTCCTTTGCTGCCATAG
ATGAGCACTTCCTGCGAGAAGGCTTTTGCTGGCACAGTGTGACTGTGCAG
GGCCACTGTGACCAGCGTTCCACTGGCCAGTTCCATTTGGAAGTTGCAGA
AATCCGGAGCCGTAATTTGTCGAATGCCATTGATGGCCGGTGTGGTTTTC
GTGTAGGATCGTAGGACTCCATGCACTCTTATTGCCTGCTGTTGCAGCAG
AAAGGTGACCAAGTCCACCACGGATCCCACGAGATTCAGGGCACCGCCGC
CCATTTGCGCATCGCACATCCAGTTGTACTTCTCGGGAAAGAGCGTTCCC
ATCTGGACGCGCACATCCATGAGTACCACGTCGCCAATAGAGCCAATTAG
CTCCTCCTGCAGACAACGACGCATATGTGTAAAGGCGGGCAGGAACCTCA
GCGGGTGATTGACCAGGGAAATCAGAGTGGGATAGTACTGAGAAGCCCGA
ACCATTTTGAGTGCGTCCTGCTGGTGCAATCCTGCTGGCTTGTCGCACAC
CACATGCTTCCCGATGCC
BO05638.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17712-PA | 1155 | CG17712-RA | 253..1152 | 918..19 | 4500 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:21:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17712-RA | 1436 | CG17712-RA | 350..1249 | 918..19 | 4500 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:21:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1750874..1751773 | 19..918 | 4500 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 10:21:50 has no hits.
BO05638.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:24 Download gff for
BO05638.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17712-PA | 253..1155 | 16..918 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:17 Download gff for
BO05638.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17712-PA | 253..1155 | 16..918 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:56:18 Download gff for
BO05638.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17712-RA | 350..1249 | 19..918 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:54:43 Download gff for
BO05638.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17712-RA | 350..1249 | 19..918 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:54:43 Download gff for
BO05638.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1750874..1751773 | 19..918 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:56:18 Download gff for
BO05638.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1750874..1751773 | 19..918 | 100 | | Plus |
BO05638.5prime Sequence
881 bp (855 high quality bases) assembled on 2005-11-29
> BO05638.5prime
GAAGTTATCAGTCGACATGCTGCCGGGCGTTGGAGTGTTCGGAACGGGAG
AGATAGCCAATGTGCTGGTGCCGCTGCTGCGGGAGAAAGGATTCGAGGTG
CGGGCCATTTGGGGCAGGACCCTGAAAGAGGCGAAAGAGACTGCGACCAC
GCAGAATGTACAATTCCATACGAACGTAATCGACGATGTCCTGCTGCGGA
AGGATGTGGATCTGGTGTTCATCGTGTGCCAGCCCTTTCTGCACGCGGAG
ATCTCGGTGAAGGCCTTGGGCATCGGGAAGCATGTGGTGTGCGACAAGCC
AGCAGGATTGCACCAGCAGGACGCACTCAAAATGGTTCGGGCTTCTCAGT
ACTATCCCACTCTGATTTCCCTGGTCAATCACCCGCTGAGGTTCCTGCCC
GCCTTTACACATATGCGTCGTTGTCTGCAGGAGGAGCTAATTGGCTCTAT
TGGCGACGTGGTACTCATGGATGTGCGCGTCCAGATGGGAACGCTCTTTC
CCGAGAAGTACAACTGGATGTGCGATGCGCAAATGGGCGGCGGTGCCCTG
AATCTCGTGGGATCCGTGGTGGACTTGGTCACCTTTCTGCTGCAACAGCA
GGCAATAAGAGTGCATGGAGTCCTACGATCCTACACGAAAACCACACCGG
CCATCAATGGCATTCGACAAATTACGGCTCCGGATTTCTGCAACTTCCAA
ATGGAACTGGCCAGTGGAACGCTGGTCACAGTGGCCCTGCACAGTCACAC
TGTGCCAGCAAAAGCCTTCTCGCAGGAAGTGCTCATCTATGGCAGCAAAG
GACACCTGGTGGTCCGCGGCGGCGACCTATTTGTCCTCAAGGAGGGCCAA
CCCAAAGAGGAAGCTGTTTACGTGGATGTCC
BO05638.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17712-PA | 1155 | CG17712-RA | 1..865 | 17..881 | 4325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:46:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17712-RA | 1436 | CG17712-RA | 98..962 | 17..881 | 4325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:46:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1751161..1752025 | 881..17 | 4325 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 19:46:04 has no hits.
BO05638.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:24 Download gff for
BO05638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17712-PA | 1..865 | 17..881 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:18 Download gff for
BO05638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17712-PA | 1..865 | 17..881 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:20:09 Download gff for
BO05638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17712-RA | 90..962 | 5..881 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:41:48 Download gff for
BO05638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17712-RA | 90..962 | 5..881 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:41:48 Download gff for
BO05638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1751161..1752033 | 5..881 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:20:09 Download gff for
BO05638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1751161..1752033 | 5..881 | 99 | | Minus |
BO05638.complete Sequence
1186 bp (1186 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ630108
> BO05638.complete
GAAGTTATCAGTCGACATGCTGCCGGGCGTTGGAGTGTTCGGAACGGGAG
AGATAGCCAATGTGCTGGTGCCGCTGCTGCGGGAGAAAGGATTCGAGGTG
CGGGCCATTTGGGGCAGGACCCTGAAAGAGGCGAAAGAGACTGCGACCAC
GCAGAATGTACAATTCCATACGAACGTAATCGACGATGTCCTGCTGCGGA
AGGATGTGGATCTGGTGTTCATCGTGTGCCAGCCCTTTCTGCACGCGGAG
ATCTCGGTGAAGGCCTTGGGCATCGGGAAGCATGTGGTGTGCGACAAGCC
AGCAGGATTGCACCAGCAGGACGCACTCAAAATGGTTCGGGCTTCTCAGT
ACTATCCCACTCTGATTTCCCTGGTCAATCACCCGCTGAGGTTCCTGCCC
GCCTTTACACATATGCGTCGTTGTCTGCAGGAGGAGCTAATTGGCTCTAT
TGGCGACGTGGTACTCATGGATGTGCGCGTCCAGATGGGAACGCTCTTTC
CCGAGAAGTACAACTGGATGTGCGATGCGCAAATGGGCGGCGGTGCCCTG
AATCTCGTGGGATCCGTGGTGGACTTGGTCACCTTTCTGCTGCAACAGCA
GGCAATAAGAGTGCATGGAGTCCTACGATCCTACACGAAAACCACACCGG
CCATCAATGGCATTCGACAAATTACGGCTCCGGATTTCTGCAACTTCCAA
ATGGAACTGGCCAGTGGAACGCTGGTCACAGTGGCCCTGCACAGTCACAC
TGTGCCAGCAAAAGCCTTCTCGCAGGAAGTGCTCATCTATGGCAGCAAAG
GACACCTGGTGGTCCGCGGCGGCGACCTATTTGTCCTCAAGGAGGGCCAA
CCCAAAGAGGAAGCTGTTTACGTGGATGTCCAGGATTTGCACTTCGCCAC
CAACAACTCTTTGCTACCACGACCATATATCAAAGGACTCTGCAAGATGG
TGGGCGCTCTGAAGGAAGCCTTCGGCAGCAAGGAGTCCTCCTGGGTTAAG
GCTCCAGTTTCCACAGCGGCCACCTTTGAGGACGGCCTCTACGTTCAGGC
TGTGGTTGAGGCCATCCGGAAATCGAACGAGACCAGGCAGTGGCAAAGGG
TTCAGCTGTCCACCGACAGCCCCCTGAATCACGACCAGATAATTCGATAT
GCACGCATGTCCACAATGGCAAGCTTTCTAGACCAT
BO05638.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:13:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17712-RA | 1155 | CG17712-PA | 1..1152 | 17..1168 | 5760 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:13:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17712-RA | 1436 | CG17712-RA | 98..1249 | 17..1168 | 5760 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:13:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1750874..1752025 | 1168..17 | 5760 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:13:25 has no hits.
BO05638.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:30:06 Download gff for
BO05638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17712-RA | 1..1155 | 17..1171 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:05:22 Download gff for
BO05638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17712-RA | 84..1243 | 5..1168 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:20:17 Download gff for
BO05638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17712-RA | 98..1249 | 17..1170 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:30:06 Download gff for
BO05638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17712-RA | 84..1243 | 5..1168 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:28:11 Download gff for
BO05638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17712-RA | 98..1249 | 17..1170 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:28:11 Download gff for
BO05638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1750871..1752025 | 17..1170 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:20:17 Download gff for
BO05638.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1750871..1752025 | 17..1170 | 99 | | Minus |
BO05638.pep Sequence
Translation from 16 to 1186
> BO05638.pep
MLPGVGVFGTGEIANVLVPLLREKGFEVRAIWGRTLKEAKETATTQNVQF
HTNVIDDVLLRKDVDLVFIVCQPFLHAEISVKALGIGKHVVCDKPAGLHQ
QDALKMVRASQYYPTLISLVNHPLRFLPAFTHMRRCLQEELIGSIGDVVL
MDVRVQMGTLFPEKYNWMCDAQMGGGALNLVGSVVDLVTFLLQQQAIRVH
GVLRSYTKTTPAINGIRQITAPDFCNFQMELASGTLVTVALHSHTVPAKA
FSQEVLIYGSKGHLVVRGGDLFVLKEGQPKEEAVYVDVQDLHFATNNSLL
PRPYIKGLCKMVGALKEAFGSKESSWVKAPVSTAATFEDGLYVQAVVEAI
RKSNETRQWQRVQLSTDSPLNHDQIIRYARMSTMASFLDH
BO05638.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:51:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17712-PA | 384 | CG17712-PA | 1..384 | 1..384 | 1977 | 100 | Plus |
