Clone Sequence Records
BO05648.3prime Sequence
701 bp (700 high quality bases) assembled on 2005-12-02
> BO05648.3prime
ATGGTCTAGAAAGCTTGCCTTGCCACGGTTTTCTGCCAGCTTGGCCTTGA
AGATGCTCTTAAGCTCGTCAGCGCCGTCGCCGTTTACCTCCTGGTAGTAG
GGTAGCTCTGCCAGACGCTTCAGCCAGGCGTGCATCTTGGGAAACTTAAA
TTCATCGATGGGAGCGGTGTCGTTCACCGAGGTTACGGTGGCCACGGCGC
AAAAGTCTGCGATGGTTAGATCAGAACCACACAAATACGGCTGATCCTTG
AGGAATCCCTCTAGGATCTCCCAGCACTTCTGGATGTATGCGATCTTGTC
GATGGAGCAGTCCGTCGATCCATAATACAGGATGGGCTCGTAAAGGAAGC
GCAGGCGCGCGAAGAGGTGGCCGGAGTCCAGATGGAGCCGAGCATCCACG
TTGGCGCGCTGCACCAATTCCTTCGGATAGAGCTGCTGCTCCTTCTGGCC
ATACTTCTCCACCAGGTAGGCGCAGATGGCGTGCGAGTCAATGATAGTGG
CCTCGCCGTCGATCAGGGTCGGGATGGTGTGCTGGGGGTTCAGCTTGAGG
AATTCCGGAGTCAGATGCTCTCCCTTCAGCAGGTTAATTGGCCGTAGTTC
AAGGTCGAGTCCGATCGCCTTAGCCGTGAGGAGGACGGCGCGCGATGGGG
GACTTAGGGTGGCATAATACAGAGCTGGCTTTGACATGTCGACTGATAAC
T
BO05648.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16936-PA | 672 | CG16936-RA | 1..669 | 687..19 | 3345 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:31:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-RC | 1311 | CG16936-RC | 542..1211 | 688..19 | 3350 | 100 | Minus |
GstE12-RB | 1022 | CG16936-RB | 227..896 | 688..19 | 3350 | 100 | Minus |
GstE12-RD | 907 | CG16936-RD | 138..807 | 688..19 | 3350 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:31:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24766844..24767418 | 19..593 | 2875 | 100 | Plus |
2R | 25286936 | 2R | 24767474..24767570 | 592..688 | 485 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 00:31:47 has no hits.
BO05648.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:42 Download gff for
BO05648.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-PA | 1..672 | 18..687 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:43 Download gff for
BO05648.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-PA | 1..672 | 18..687 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:26:08 Download gff for
BO05648.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RD | 133..812 | 13..692 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:41:29 Download gff for
BO05648.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RD | 133..812 | 13..692 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:41:29 Download gff for
BO05648.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24766839..24767417 | 13..592 | 99 | <- | Plus |
2R | 24767475..24767575 | 593..692 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:26:08 Download gff for
BO05648.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20654362..20654940 | 13..592 | 99 | <- | Plus |
arm_2R | 20654998..20655098 | 593..692 | 98 | | Plus |
BO05648.5prime Sequence
701 bp (700 high quality bases) assembled on 2005-12-02
> BO05648.5prime
GAAGTTATCAGTCGACATGTCAAAGCCAGCTCTGTATTATGCCACCCTAA
GTCCCCCATCGCGCGCCGTCCTCCTCACGGCTAAGGCGATCGGACTCGAC
CTTGAACTACGGCCAATTAACCTGCTGAAGGGAGAGCATCTGACTCCGGA
ATTCCTCAAGCTGAACCCCCAGCACACCATCCCGACCCTGATCGACGGCG
AGGCCACTATCATTGACTCGCACGCCATCTGCGCCTACCTGGTGGAGAAG
TATGGCCAGAAGGAGCAGCAGCTCTATCCGAAGGAATTGGTGCAGCGCGC
CAACGTGGATGCTCGGCTCCATCTGGACTCCGGCCACCTCTTCGCGCGCC
TGCGCTTCCTTTACGAGCCCATCCTGTATTATGGATCGACGGACTGCTCC
ATCGACAAGATCGCATACATCCAGAAGTGCTGGGAGATCCTAGAGGGATT
CCTCAAGGATCAGCCGTATTTGTGTGGTTCTGATCTAACCATCGCAGACT
TTTGCGCCGTGGCCACCGTAACCTCGGTGAACGACACCGCTCCCATCGAT
GAATTTAAGTTTCCCAAGATGCACGCCTGGCTGAAGCGTCTGGCAGAGCT
ACCCTACTACCAGGAGGTAAACGGCGACGGCGCTGACGAGCTTAAGAGCA
TCTTCAAGGCCAAGCTGGCAGAAAACCGTGGCAAGGCAAGCTTTCTAGAC
C
BO05648.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16936-PA | 672 | CG16936-RA | 1..669 | 17..685 | 3345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:22:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-RC | 1311 | CG16936-RC | 542..1211 | 16..685 | 3350 | 100 | Plus |
GstE12-RB | 1022 | CG16936-RB | 227..896 | 16..685 | 3350 | 100 | Plus |
GstE12-RD | 907 | CG16936-RD | 138..807 | 16..685 | 3350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:21:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24766844..24767418 | 685..111 | 2875 | 100 | Minus |
2R | 25286936 | 2R | 24767474..24767570 | 112..16 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:21:59 has no hits.
BO05648.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:42 Download gff for
BO05648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-PA | 1..672 | 17..686 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:44 Download gff for
BO05648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-PA | 1..672 | 17..686 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:56:21 Download gff for
BO05648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RD | 133..812 | 12..691 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:55:03 Download gff for
BO05648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RD | 133..812 | 12..691 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:55:03 Download gff for
BO05648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24766839..24767417 | 112..691 | 99 | <- | Minus |
2R | 24767475..24767575 | 12..111 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:56:21 Download gff for
BO05648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20654362..20654940 | 112..691 | 99 | <- | Minus |
arm_2R | 20654998..20655098 | 12..111 | 98 | | Minus |
BO05648.complete Sequence
703 bp (703 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ630115
> BO05648.complete
GAAGTTATCAGTCGACATGTCAAAGCCAGCTCTGTATTATGCCACCCTAA
GTCCCCCATCGCGCGCCGTCCTCCTCACGGCTAAGGCGATCGGACTCGAC
CTTGAACTACGGCCAATTAACCTGCTGAAGGGAGAGCATCTGACTCCGGA
ATTCCTCAAGCTGAACCCCCAGCACACCATCCCGACCCTGATCGACGGCG
AGGCCACTATCATTGACTCGCACGCCATCTGCGCCTACCTGGTGGAGAAG
TATGGCCAGAAGGAGCAGCAGCTCTATCCGAAGGAATTGGTGCAGCGCGC
CAACGTGGATGCTCGGCTCCATCTGGACTCCGGCCACCTCTTCGCGCGCC
TGCGCTTCCTTTACGAGCCCATCCTGTATTATGGATCGACGGACTGCTCC
ATCGACAAGATCGCATACATCCAGAAGTGCTGGGAGATCCTAGAGGGATT
CCTCAAGGATCAGCCGTATTTGTGTGGTTCTGATCTAACCATCGCAGACT
TTTGCGCCGTGGCCACCGTAACCTCGGTGAACGACACCGCTCCCATCGAT
GAATTTAAGTTTCCCAAGATGCACGCCTGGCTGAAGCGTCTGGCAGAGCT
ACCCTACTACCAGGAGGTAAACGGCGACGGCGCTGACGAGCTTAAGAGCA
TCTTCAAGGCCAAGCTGGCAGAAAACCGTGGCAAGGCAAGCTTTCTAGAC
CAT
BO05648.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:00:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-RC | 672 | CG16936-PC | 1..669 | 17..685 | 3345 | 100 | Plus |
GstE12-RB | 672 | CG16936-PB | 1..669 | 17..685 | 3345 | 100 | Plus |
GstE12-RD | 672 | CG16936-PD | 1..669 | 17..685 | 3345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:00:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-RC | 1311 | CG16936-RC | 542..1211 | 16..685 | 3350 | 100 | Plus |
GstE12-RB | 1022 | CG16936-RB | 227..896 | 16..685 | 3350 | 100 | Plus |
GstE12-RD | 907 | CG16936-RD | 138..807 | 16..685 | 3350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:00:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24766844..24767418 | 685..111 | 2875 | 100 | Minus |
2R | 25286936 | 2R | 24767474..24767570 | 112..16 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:00:11 has no hits.
BO05648.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:30:07 Download gff for
BO05648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-RA | 1..672 | 17..686 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:56:36 Download gff for
BO05648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-RA | 54..737 | 7..691 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:31:00 Download gff for
BO05648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RD | 139..807 | 17..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:30:07 Download gff for
BO05648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-RA | 54..737 | 7..691 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:01:09 Download gff for
BO05648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RD | 139..807 | 17..687 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:01:09 Download gff for
BO05648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24766842..24767417 | 112..687 | 99 | <- | Minus |
2R | 24767475..24767569 | 17..111 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:31:00 Download gff for
BO05648.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20654365..20654940 | 112..687 | 99 | <- | Minus |
arm_2R | 20654998..20655092 | 17..111 | 100 | | Minus |
BO05648.pep Sequence
Translation from 16 to 703
> BO05648.pep
MSKPALYYATLSPPSRAVLLTAKAIGLDLELRPINLLKGEHLTPEFLKLN
PQHTIPTLIDGEATIIDSHAICAYLVEKYGQKEQQLYPKELVQRANVDAR
LHLDSGHLFARLRFLYEPILYYGSTDCSIDKIAYIQKCWEILEGFLKDQP
YLCGSDLTIADFCAVATVTSVNDTAPIDEFKFPKMHAWLKRLAELPYYQE
VNGDGADELKSIFKAKLAENRGKASFLDH
BO05648.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:51:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-PC | 223 | CG16936-PC | 1..223 | 1..223 | 1169 | 100 | Plus |
GstE12-PB | 223 | CG16936-PB | 1..223 | 1..223 | 1169 | 100 | Plus |
GstE12-PD | 223 | CG16936-PD | 1..223 | 1..223 | 1169 | 100 | Plus |
GstE12-PA | 223 | CG16936-PA | 1..223 | 1..223 | 1169 | 100 | Plus |
GstE11-PB | 225 | CG5224-PB | 3..225 | 2..223 | 566 | 49.3 | Plus |