Clone BO05651 Report

Search the DGRC for BO05651

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:56
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG14476-RA
Protein status:BO05651.pep: Imported from assembly
Sequenced Size:2806

Clone Sequence Records

BO05651.3prime Sequence

894 bp (793 high quality bases) assembled on 2005-12-02

> BO05651.3prime
ATGGTCTAGAAAGCTTGCCGCAAAGTTGAGTTTAATGGCGAAGTCGACGT
CCATCTTGACGCCCGGCTTGCGCACGACGACGGTGTTATCATGATGGAGC
ACCTCCAGCTGCTGGCTGACACCATTCACCGTGATGCTGGCGCTGCTGGG
CACCTTCTCAAGTCCGGCGATCACGATTCGCTCGATCCAGGCAAGGGTCT
TGTACTTGGGCTTGCCCACGAAGCTATTGACCAGCTGGTCGTGGGCGAAC
TCGTAGTTCACGTGGATGCGCTGGCCCTGGCGGTAAGCGTAGGACTTCTC
GTCGTCTAGGTAGAGGGAACCGGATGCCTTGCCCTGACGGTCTAAGCAGA
TTATCAGTGTGTACGGATCGTGCAACATCAAGGTTGAGGCGCGGCGCTGT
CGCTCCTTCTTCGGTACAATGCTGCCACCACGCTGCCAAACGGGGATCTT
GAAATCATCTACTGGAACCGACACATAGCCGGATCGTTCCTGGCGCTGGT
AAGTATCCACATCGTACCACCAGTCGCCATTCTTTTTGTCGTCAATTGCC
GGGAAGTACACGTCCACCTTGCTGACGCCCTGCTGCATGACGGGTCTCAC
AAGCAGGCGATCTTGCACCAACAGCTGGTTGTCAACGCCGAAGGCCTCCT
TATCCAGTGGATATTGGGCTAATAATGGGCGAATTACCGGCTCGCCAGTC
AGCTCCAGCTCGTAGAATGCGGTGTACCACAGGGGCAGATATGAATAACG
CTTGATCACAGCATTTTGGATAACCTGGCGAGTGCGTTCTGGGAAAACCA
TGGCTCCCGGCGCTTAGTGTCGATGTGTGCATGAGCCCGGAAAAAAGGCA
GGAAGGCACCGGTTTGATACCAGCGCTCCAGCAGCTCAGTATCT

BO05651.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14476-PB 2775 CG14476-RB 1994..2772 797..19 3895 100 Minus
CG14476-PA 2775 CG14476-RA 1994..2772 797..19 3895 100 Minus
CG14476-PD 2775 CG14476-RD 1994..2772 797..19 3895 100 Minus
CG14476-PE 2775 CG14476-RE 1994..2772 797..19 3895 100 Minus
CG14476-PC 2775 CG14476-RC 1994..2772 797..19 3895 100 Minus
CG14476-PB 2775 CG14476-RB 1896..1992 894..798 460 98.9 Minus
CG14476-PA 2775 CG14476-RA 1896..1992 894..798 460 98.9 Minus
CG14476-PD 2775 CG14476-RD 1896..1992 894..798 460 98.9 Minus
CG14476-PE 2775 CG14476-RE 1896..1992 894..798 460 98.9 Minus
CG14476-PC 2775 CG14476-RC 1896..1992 894..798 460 98.9 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 18:53:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG14476-RC 3252 CG14476-RC 2032..2908 894..19 4345 99.8 Minus
CG14476-RE 3264 CG14476-RE 2142..3018 894..19 4345 99.8 Minus
CG14476-RD 3129 CG14476-RD 2007..2883 894..19 4345 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 18:53:24
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21601344..21601791 448..894 2175 99.6 Plus
X 23542271 X 21600846..21601276 19..449 2155 100 Plus
Blast to na_te.dros performed on 2015-02-09 18:53:28 has no hits.

BO05651.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:47 Download gff for BO05651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14476-PE 1896..2775 18..894 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:51 Download gff for BO05651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14476-PA 1896..2775 18..894 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:02:31 Download gff for BO05651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14476-RD 2016..2892 19..894 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:15:32 Download gff for BO05651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14476-RD 2007..2883 19..894 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:15:32 Download gff for BO05651.3prime
Subject Subject Range Query Range Percent Splice Strand
X 21600846..21601274 19..447 100 <- Plus
X 21601344..21601791 448..894 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:02:31 Download gff for BO05651.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 21471873..21472301 19..447 100 <- Plus
arm_X 21472371..21472818 448..894 99   Plus

BO05651.5prime Sequence

929 bp (848 high quality bases) assembled on 2005-12-02

> BO05651.5prime
GAAGTTATCAGTCGACATGCGATTCGCTCTGGCCACCGTGGCCATCATCT
GGGCTTTATTCGTCCTGGCCGACGGAGTGGACCCCGGGAACTTTAAGACC
TGCGAGCAGAGCAGTTTTTGTCGACGCTCCCGAAAGATTCAGGGATCGGG
CAGCAAGTACGCCTTAATTCCCGGCACCTTGAACACCTATGCGGATTCGT
TGACCGCTGATCTCGTTAACAAGGAAAACCATCACCAGTTTGCCTTTAAG
CTAGAGGCTCTGGTGGGCAGTACCTTCCGCCTGCAGATCGATGAAAAGCA
GCCACTTCGGCCACGATATCGCGTCGAGCACGCTCTGAAGGGCCCAACCC
AGGCCGGACGCATTCGTGTCCAGCGGGAAACAGATGGAGAGATCGTTATC
ACATCGGAGAAGAACAAGGCTGTGATCCACGGAGACCCGTTCCGCATCGA
TTTCTTCGAGAACGACGTGCTGGTGGTCTCGGTGAATGCCAAGAACTGGT
TGTACTTTGAGCATCTGCGGCAGAAGGCCCAGGAACCGACCTCCCACCCG
GCGGAAAACGAGAATCAGCAGGAGCAGGATGCCGCTGTCGAAACTCCTAA
AGCAGCAGATACTATCGATGATCCTGGTGCATGGGAGGAGAACTTCAAAT
CACACCACGACTCTAAGCCCTACGGTCCGGAAGCTGTGGCTCTGGACTTT
TCGTTCCCCGCAGCCAAAGTTCTATTCGGTATTCCAGAGCACGCCGACAG
CTTCATACTAAAGTCCACCTCGGGTACGGATCCTTACCGCCTGTACAACC
TGNATGTGTTCGAATACGTTGTGGACAGCAAGATGGCCCTGTACGGCTCA
GTGCCGGGTATCTATGGTCATGGAGCGCAACGCACAGCGGGCGTTTACTG
GCAGAATGCCGCTGAAACTTGGGTGGACA

BO05651.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG14476-PB 2775 CG14476-RB 1..913 17..929 4496 99.6 Plus
CG14476-PA 2775 CG14476-RA 1..913 17..929 4496 99.6 Plus
CG14476-PD 2775 CG14476-RD 1..913 17..929 4496 99.6 Plus
CG14476-PE 2775 CG14476-RE 1..913 17..929 4496 99.6 Plus
CG14476-PC 2775 CG14476-RC 1..913 17..929 4496 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:57:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG14476-RC 3252 CG14476-RC 136..1049 16..929 4529 99.7 Plus
CG14476-RE 3264 CG14476-RE 246..1159 16..929 4529 99.7 Plus
CG14476-RD 3129 CG14476-RD 111..1024 16..929 4529 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:57:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21602981..21603731 873..123 3714 99.6 Minus
X 23542271 X 21604463..21604570 123..16 540 100 Minus
X 23542271 X 21602774..21602830 929..873 285 100 Minus
Blast to na_te.dros performed on 2015-02-11 15:57:17 has no hits.

BO05651.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:48 Download gff for BO05651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14476-PE 1..912 17..928 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:53 Download gff for BO05651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14476-PC 1..912 17..928 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:36:44 Download gff for BO05651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14476-RD 114..1032 10..928 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:35:33 Download gff for BO05651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14476-RD 105..1023 10..928 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:35:33 Download gff for BO05651.5prime
Subject Subject Range Query Range Percent Splice Strand
X 21602775..21602829 874..928 100 <- Minus
X 21602981..21603730 124..873 99 <- Minus
X 21604463..21604576 10..123 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:36:44 Download gff for BO05651.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 21473802..21473856 874..928 100 <- Minus
arm_X 21474008..21474757 124..873 99 <- Minus
arm_X 21475490..21475603 10..123 98   Minus

BO05651.complete Sequence

2806 bp assembled on 2008-08-14

GenBank Submission: FJ630118

> BO05651.complete
GAAGTTATCAGTCGACATGCGATTCGCTCTGGCCACCGTGGCCATCATCT
GGGCTTTATTCGTCCTGGCCGACGGAGTGGACCCCGGGAACTTTAAGACC
TGCGAGCAGAGCAGTTTTTGTCGACGCTCCCGAAAGATTCAGGGATCGGG
CAGCAAGTACGCCTTAATTCCCGGCACCTTGAACACCTATGCGGATTCGT
TGACCGCTGATCTCGTTAACAAGGAAAACCATCACCAGTTTGCCTTTAAG
CTAGAGGCTCTGGTGGGCAGTACCTTCCGCCTGCAGATCGATGAAAAGCA
GCCACTTCGGCCACGATATCGCGTCGAGCACGCTCTGAAGGGCCCAACCC
AGGCCGGACGCATTCGTGTCCAGCGGGAAACAGATGGAGAGATCGTTATC
ACATCGGAGAAGAACAAGGCTGTGATCCACGGAGACCCGTTCCGCATCGA
TTTCTTCGAGAACGACGTGCTGGTGGTCTCGGTGAATGCCAAGAACTGGT
TGTACTTTGAGCATCTGCGGCAGAAGGCCCAGGAACCGACCTCCCACCCG
GCGGAAAACGAGAATCAGCAGGAGCAGGATGCCGCTGTCGAAACTCCTAA
AGCAGCAGATACTATCGATGATCCTGGTGCATGGGAGGAGAACTTCAAAT
CACACCACGACTCTAAGCCCTACGGTCCGGAAGCTGTGGCTCTGGACTTT
TCGTTCCCCGCAGCCAAAGTTCTATTCGGTATTCCAGAGCACGCCGACAG
CTTCATACTAAAGTCCACCTCGGGTACGGATCCTTACCGCCTGTACAACC
TGGATGTGTTCGAATACGTTGTGGACAGCAAGATGGCCCTGTACGGCTCA
GTGCCGGTAATCTATGGTCATGGAGCGCAACGCACAGCGGGCGTTTACTG
GCAGAATGCCGCTGAAACTTGGGTGGACATTCAAACGTCGGAGACCAATG
TTGTATCTTCGCTGGTAAATTTTGTATCCGGCTCGCAGAAGACTCCTCCT
CCGGCTGCCCACTTTATGTCGGAGTCGGGCATCGTGGACGCCTTCATCAT
GTTGGGACCCAAGCCCATGGACACTTTTAAGCAGTACGCGGCTCTGACTG
GAACACACGAGTTACCTCAGTTATTTGCTCTGGCCTACCACCAGAGCCGC
TGGAACTACAACGACGAGAGGGACGTGACCTCCGTGTCAGCGAAATTCGA
CGAGTACAATATACCCATGGACACCATGTGGCTGGACATCGAGCATACAG
ATGGCAAGCGCTACTTCACCTGGGACAAGTTCAAGTTCCCGCACCCGCTG
GCAATGATCAAGAATCTTACAGAACTGGGTCGCCACTTGGTGGTGATAGT
CGACCCGCACATCAAGCGGGATAATAATTACTTCTTCCACCGCGACTGCA
CGGATCGTGGTTATTATGTGAAAACGCGCGAGGGCAATGATTACGAGGGC
TGGTGTTGGCCGGGAGCGGCTAGTTATCCTGATTTCTTTAACCCCGTGGT
CAGAGAGTACTACGCCAGCCAGTACGCGCTGGACAAGTTCCAAACGGTCA
CCGCAGATGTGATGTTGTGGAACGACATGAACGAGCCATCGGTGTTCAAC
GGCCCTGAGATCACGGCGCCCAAGGACTTGATCCACTACGGCAACTGGGA
GCACCGTGACGTGCACAATTTGTACGGTCACATGCACTTGATGGGGTCCT
TCGCGGGCCTGCAGCAGCGCGATCCCAACCAGCGGCCCTTCATCCTCACA
CGCGCCCACTTTGCTGGTTCCCAGCGTTATGCTGCCATTTGGACGGGTGA
CAACTTTGCGGACTGGTCGCATCTACAGCACTCAGTCAAAATGTGTCTCA
CGGAGGCGGTGGCCGGCTTCTCCTTCTGCGGTGCCGATGTCGGTGCCTTC
TTTGGAAACCCAGATACTGAGCTGCTGGAGCGCTGGTATCAAACCGGTGC
CTTCCTGCCCTTTTTCCGGGCTCATGCACACATCGACACTAAGCGCCGGG
AGCCATGGCTTTTCCCAGAACGCACTCGCCAGGTTATCCAAAATGCTGTG
ATCAAGCGTTATTCATATCTGCCCCTGTGGTACACCGCATTCTACGAGCT
GGAGCTGACTGGCGAGCCGGTAATTCGCCCATTATTAGCCCAATATCCAC
TGGATAAGGAGGCCTTCGGCGTTGACAACCAGCTGTTGGTGCAAGATCGC
CTGCTTGTGAGACCCGTCATGCAGCAGGGCGTCAGCAAGGTGGACGTGTA
CTTCCCGGCAATTGACGACAAAAAGAATGGCGACTGGTGGTACGATGTGG
ATACTTACCAGCGCCAGGAACGATCCGGCTATGTGTCGGTTCCAGTAGAT
GATTTCAAGATCCCCGTTTGGCAGCGTGGTGGCAGCATTGTACCGAAGAA
GGAGCGACAGCGCCGCGCCTCAACCTTGATGTTGCACGATCCGTACACAC
TGATAATCTGCTTAGACCGTCAGGGCAAGGCATCCGGTTCCCTCTACCTA
GACGACGAGAAGTCCTACGCTTACCGCCAGGGCCAGCGCATCCACGTGAA
CTACGAGTTCGCCCACGACCAGCTGGTCAATAGCTTCGTGGGCAAGCCCA
AGTACAAGACCCTTGCCTGGATCGAGCGAATCGTGATCGCCGGACTTGAG
AAGGTGCCCAGCAGCGCCAGCATCACGGTGAATGGTGTCAGCCAGCAGCT
GGAGGTGCTCCATCATGATAACACCGTCGTCGTGCGCAAGCCGGGCGTCA
AGATGGACGTCGACTTCGCCATTAAACTCAACTTTGCGGCAAGCTTTCTA
GACCAT

BO05651.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:21:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG14476-RC 2775 CG14476-PC 1..2772 17..2788 13860 100 Plus
CG14476-RE 2775 CG14476-PE 1..2772 17..2788 13860 100 Plus
CG14476-RD 2775 CG14476-PD 1..2772 17..2788 13860 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:21:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14476-RC 3252 CG14476-RC 136..2908 16..2788 13865 100 Plus
CG14476-RE 3264 CG14476-RE 246..3018 16..2788 13865 100 Plus
CG14476-RD 3129 CG14476-RD 111..2883 16..2788 13865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:21:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21601344..21602830 2359..873 7435 100 Minus
X 23542271 X 21602981..21603731 873..123 3755 100 Minus
X 23542271 X 21600846..21601276 2788..2358 2155 100 Minus
X 23542271 X 21604463..21604570 123..16 540 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:21:13 has no hits.

BO05651.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:42:39 Download gff for BO05651.complete
Subject Subject Range Query Range Percent Splice Strand
CG14476-RD 114..2892 10..2788 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:22:55 Download gff for BO05651.complete
Subject Subject Range Query Range Percent Splice Strand
CG14476-RD 121..2892 17..2790 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:12:04 Download gff for BO05651.complete
Subject Subject Range Query Range Percent Splice Strand
CG14476-RD 121..2892 17..2790 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:23 Download gff for BO05651.complete
Subject Subject Range Query Range Percent Splice Strand
CG14476-RD 112..2883 17..2790 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:23 Download gff for BO05651.complete
Subject Subject Range Query Range Percent Splice Strand
X 21600844..21601274 2360..2790 99 <- Minus
X 21601344..21602829 874..2359 100 <- Minus
X 21602981..21603730 124..873 100 <- Minus
X 21604463..21604569 17..123 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:22:55 Download gff for BO05651.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21471871..21472301 2360..2790 99 <- Minus
arm_X 21472371..21473856 874..2359 100 <- Minus
arm_X 21474008..21474757 124..873 100 <- Minus
arm_X 21475490..21475596 17..123 100   Minus

BO05651.pep Sequence

Translation from 16 to 2806

> BO05651.pep
MRFALATVAIIWALFVLADGVDPGNFKTCEQSSFCRRSRKIQGSGSKYAL
IPGTLNTYADSLTADLVNKENHHQFAFKLEALVGSTFRLQIDEKQPLRPR
YRVEHALKGPTQAGRIRVQRETDGEIVITSEKNKAVIHGDPFRIDFFEND
VLVVSVNAKNWLYFEHLRQKAQEPTSHPAENENQQEQDAAVETPKAADTI
DDPGAWEENFKSHHDSKPYGPEAVALDFSFPAAKVLFGIPEHADSFILKS
TSGTDPYRLYNLDVFEYVVDSKMALYGSVPVIYGHGAQRTAGVYWQNAAE
TWVDIQTSETNVVSSLVNFVSGSQKTPPPAAHFMSESGIVDAFIMLGPKP
MDTFKQYAALTGTHELPQLFALAYHQSRWNYNDERDVTSVSAKFDEYNIP
MDTMWLDIEHTDGKRYFTWDKFKFPHPLAMIKNLTELGRHLVVIVDPHIK
RDNNYFFHRDCTDRGYYVKTREGNDYEGWCWPGAASYPDFFNPVVREYYA
SQYALDKFQTVTADVMLWNDMNEPSVFNGPEITAPKDLIHYGNWEHRDVH
NLYGHMHLMGSFAGLQQRDPNQRPFILTRAHFAGSQRYAAIWTGDNFADW
SHLQHSVKMCLTEAVAGFSFCGADVGAFFGNPDTELLERWYQTGAFLPFF
RAHAHIDTKRREPWLFPERTRQVIQNAVIKRYSYLPLWYTAFYELELTGE
PVIRPLLAQYPLDKEAFGVDNQLLVQDRLLVRPVMQQGVSKVDVYFPAID
DKKNGDWWYDVDTYQRQERSGYVSVPVDDFKIPVWQRGGSIVPKKERQRR
ASTLMLHDPYTLIICLDRQGKASGSLYLDDEKSYAYRQGQRIHVNYEFAH
DQLVNSFVGKPKYKTLAWIERIVIAGLEKVPSSASITVNGVSQQLEVLHH
DNTVVVRKPGVKMDVDFAIKLNFAASFLDH

BO05651.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 03:05:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG14476-PC 924 CG14476-PC 1..924 1..924 4967 100 Plus
CG14476-PE 924 CG14476-PE 1..924 1..924 4967 100 Plus
CG14476-PD 924 CG14476-PD 1..924 1..924 4967 100 Plus
CG14476-PA 924 CG14476-PA 1..924 1..924 4967 100 Plus
CG14476-PB 924 CG14476-PB 1..924 1..924 4967 100 Plus