Clone BO05654 Report

Search the DGRC for BO05654

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:56
Well:54
Vector:pDNR-Dual
Associated Gene/TranscriptFkbp13-RA
Protein status:BO05654.pep: validated full length
Sequenced Size:682

Clone Sequence Records

BO05654.3prime Sequence

680 bp (679 high quality bases) assembled on 2005-12-02

> BO05654.3prime
ATGGTCTAGAAAGCTTGCCAGCTCGTCGTGTTTGGGTCCCGAGAACTCAT
CGTGCGAGATGAAACCGTTCTTATCCTTATCCTCGTGCTGAAAGATCTCC
TCCACCAGCTTGTCGTTCTCAGCCAGCATGTTCTTCAGCTCCTCGGAATC
CTGTCCCTCCACGGCGGTCATCTGCTTCTTTAGATACTCGCTGACCTCTT
CGCGACTCAGCTGCTTGTCGGCATTATCGTCGATCTCCTTGAACACATTG
GTGGTGGGCGGGGCATTGCCGATGTTGATCAGCTCCACATCGAAGAGGAG
GGTGGCCTTGGGCGGTATCACGTTGCCGGCACCCTGGTCACCATAGCCCA
GCTGGGGAGGAATGGTCAGCTTGCGCTTCTCACCCACGCACATGTTGAGC
AGACCCTGATCCCAACCCTTAATCACCTGGCCGGCGCCCAATTGGAATGT
GAAGGGCTGGTCGCGGTCGAAGCTCGAGTCGAATTTCTTGCCATCGGCCT
GCAGAGTTCCAGTGTAGTGCATGGTGAGGGAATCGCCGTTCTTGGACTTT
TGTTCGCACACCTCCGGCGTGCTGATCACCTCCACTTTCAGATCCTGAGC
CCGGACCAGGCTGTTGCTGATGGCCACCAGCAGAAGGCACGAGATAACGA
GATTGGATTTCGACATGTCGACTGATAACT

BO05654.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG9847-PB 696 Fkbp13-RB 45..693 667..19 3245 100 Minus
CG9847-PA 651 Fkbp13-RA 1..648 666..19 3240 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:01:49
Subject Length Description Subject Range Query Range Score Percent Strand
Fkbp14-RF 1350 CG9847-RF 200..848 667..19 3245 100 Minus
Fkbp14-RE 1294 CG9847-RE 144..792 667..19 3245 100 Minus
Fkbp14-RC 1301 CG9847-RC 151..799 667..19 3245 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:01:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21495131..21495325 473..667 975 100 Plus
2R 25286936 2R 21488017..21488207 194..384 955 100 Plus
2R 25286936 2R 21487669..21487847 19..197 895 100 Plus
2R 25286936 2R 21488271..21488363 382..474 465 100 Plus
Blast to na_te.dros performed on 2015-02-13 00:01:47 has no hits.

BO05654.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:51 Download gff for BO05654.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9847-PB 40..696 18..675 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:57 Download gff for BO05654.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9847-PB 40..696 18..675 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:11:31 Download gff for BO05654.3prime
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RC 146..799 19..675 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:28:57 Download gff for BO05654.3prime
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RC 146..799 19..675 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:28:57 Download gff for BO05654.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21495131..21495332 473..678 97   Plus
2R 21487669..21487845 19..195 100 <- Plus
2R 21488019..21488206 196..383 100 <- Plus
2R 21488273..21488361 384..472 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:11:31 Download gff for BO05654.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17375174..17375350 19..195 100 <- Plus
arm_2R 17375524..17375711 196..383 100 <- Plus
arm_2R 17375778..17375866 384..472 100 <- Plus
arm_2R 17382636..17382837 473..678 97   Plus

BO05654.5prime Sequence

680 bp (679 high quality bases) assembled on 2005-11-29

> BO05654.5prime
GAAGTTATCAGTCGACATGTCGAAATCCAATCTCGTTATCTCGTGCCTTC
TGCTGGTGGCCATCAGCAACAGCCTGGTCCGGGCTCAGGATCTGAAAGTG
GAGGTGATCAGCACGCCGGAGGTGTGCGAACAAAAGTCCAAGAACGGCGA
TTCCCTCACCATGCACTACACTGGAACTCTGCAGGCCGATGGCAAGAAAT
TCGACTCGAGCTTCGACCGCGACCAGCCCTTCACATTCCAATTGGGCGCC
GGCCAGGTGATTAAGGGTTGGGATCAGGGTCTGCTCAACATGTGCGTGGG
TGAGAAGCGCAAGCTGACCATTCCTCCCCAGCTGGGCTATGGTGACCAGG
GTGCCGGCAACGTGATACCGCCCAAGGCCACCCTCCTCTTCGATGTGGAG
CTGATCAACATCGGCAATGCCCCGCCCACCACCAATGTGTTCAAGGAGAT
CGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTCAGCGAGTATC
TAAAGAAGCAGATGACCGCCGTGGAGGGACAGGATTCCGAGGAGCTGAAG
AACATGCTGGCTGAGAACGACAAGCTGGTGGAGGAGATCTTTCAGCACGA
GGATAAGGATAAGAACGGTTTCATCTCGCACGATGAGTTCTCGGGACCCA
AACACGACGAGCTGGCAAGCTTTCTAGACC

BO05654.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG9847-PB 696 Fkbp13-RB 45..693 16..664 3245 100 Plus
CG9847-PA 651 Fkbp13-RA 1..648 17..664 3240 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:46:25
Subject Length Description Subject Range Query Range Score Percent Strand
Fkbp14-RF 1350 CG9847-RF 200..848 16..664 3245 100 Plus
Fkbp14-RE 1294 CG9847-RE 144..792 16..664 3245 100 Plus
Fkbp14-RC 1301 CG9847-RC 151..799 16..664 3245 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:46:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21495131..21495325 210..16 975 100 Minus
2R 25286936 2R 21488017..21488207 489..299 955 100 Minus
2R 25286936 2R 21487669..21487847 664..486 895 100 Minus
2R 25286936 2R 21488271..21488363 301..209 465 100 Minus
Blast to na_te.dros performed on 2015-02-04 19:46:22 has no hits.

BO05654.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:52 Download gff for BO05654.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9847-PB 40..696 8..665 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:51:59 Download gff for BO05654.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9847-PB 40..696 8..665 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:20:12 Download gff for BO05654.5prime
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RC 146..799 8..664 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:41:52 Download gff for BO05654.5prime
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RC 146..799 8..664 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:41:52 Download gff for BO05654.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21487669..21487845 488..664 100 <- Minus
2R 21488019..21488206 300..487 100 <- Minus
2R 21488273..21488361 211..299 100 <- Minus
2R 21495131..21495332 5..210 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:20:12 Download gff for BO05654.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17375174..17375350 488..664 100 <- Minus
arm_2R 17375524..17375711 300..487 100 <- Minus
arm_2R 17375778..17375866 211..299 100 <- Minus
arm_2R 17382636..17382837 5..210 97   Minus

BO05654.complete Sequence

682 bp (682 high quality bases) assembled on 2005-10-17

GenBank Submission: FJ630119

> BO05654.complete
GAAGTTATCAGTCGACATGTCGAAATCCAATCTCGTTATCTCGTGCCTTC
TGCTGGTGGCCATCAGCAACAGCCTGGTCCGGGCTCAGGATCTGAAAGTG
GAGGTGATCAGCACGCCGGAGGTGTGCGAACAAAAGTCCAAGAACGGCGA
TTCCCTCACCATGCACTACACTGGAACTCTGCAGGCCGATGGCAAGAAAT
TCGACTCGAGCTTCGACCGCGACCAGCCCTTCACATTCCAATTGGGCGCC
GGCCAGGTGATTAAGGGTTGGGATCAGGGTCTGCTCAACATGTGCGTGGG
TGAGAAGCGCAAGCTGACCATTCCTCCCCAGCTGGGCTATGGTGACCAGG
GTGCCGGCAACGTGATACCGCCCAAGGCCACCCTCCTCTTCGATGTGGAG
CTGATCAACATCGGCAATGCCCCGCCCACCACCAATGTGTTCAAGGAGAT
CGACGATAATGCCGACAAGCAGCTGAGTCGCGAAGAGGTCAGCGAGTATC
TAAAGAAGCAGATGACCGCCGTGGAGGGACAGGATTCCGAGGAGCTGAAG
AACATGCTGGCTGAGAACGACAAGCTGGTGGAGGAGATCTTTCAGCACGA
GGATAAGGATAAGAACGGTTTCATCTCGCACGATGAGTTCTCGGGACCCA
AACACGACGAGCTGGCAAGCTTTCTAGACCAT

BO05654.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
Fkbp14-RF 651 CG9847-PF 1..648 17..664 3240 100 Plus
Fkbp14-RE 651 CG9847-PE 1..648 17..664 3240 100 Plus
Fkbp14-RC 651 CG9847-PC 1..648 17..664 3240 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
Fkbp14-RF 1350 CG9847-RF 200..848 16..664 3245 100 Plus
Fkbp14-RE 1294 CG9847-RE 144..792 16..664 3245 100 Plus
Fkbp14-RC 1301 CG9847-RC 151..799 16..664 3245 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:19:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21495131..21495325 210..16 975 100 Minus
2R 25286936 2R 21488017..21488207 489..299 955 100 Minus
2R 25286936 2R 21487669..21487847 664..486 895 100 Minus
2R 25286936 2R 21488271..21488363 301..209 465 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:19:09 has no hits.

BO05654.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:30:09 Download gff for BO05654.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp13-RB 40..696 8..665 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:56:39 Download gff for BO05654.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp13-RC 143..796 8..664 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:22:18 Download gff for BO05654.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RC 152..799 17..666 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:30:09 Download gff for BO05654.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp13-RA 144..795 10..664 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:29:52 Download gff for BO05654.complete
Subject Subject Range Query Range Percent Splice Strand
Fkbp14-RC 152..799 17..666 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:52 Download gff for BO05654.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21487667..21487845 488..666 98 <- Minus
2R 21488019..21488206 300..487 100 <- Minus
2R 21488273..21488361 211..299 100 <- Minus
2R 21495131..21495324 17..210 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:22:18 Download gff for BO05654.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17375172..17375350 488..666 98 <- Minus
arm_2R 17375524..17375711 300..487 100 <- Minus
arm_2R 17375778..17375866 211..299 100 <- Minus
arm_2R 17382636..17382829 17..210 100   Minus

BO05654.pep Sequence

Translation from 16 to 682

> BO05654.pep
MSKSNLVISCLLLVAISNSLVRAQDLKVEVISTPEVCEQKSKNGDSLTMH
YTGTLQADGKKFDSSFDRDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKL
TIPPQLGYGDQGAGNVIPPKATLLFDVELINIGNAPPTTNVFKEIDDNAD
KQLSREEVSEYLKKQMTAVEGQDSEELKNMLAENDKLVEEIFQHEDKDKN
GFISHDEFSGPKHDELASFLDH

BO05654.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:51:20
Subject Length Description Subject Range Query Range Score Percent Strand
Fkbp14-PF 216 CG9847-PF 1..216 1..216 1117 100 Plus
Fkbp14-PE 216 CG9847-PE 1..216 1..216 1117 100 Plus
Fkbp14-PC 216 CG9847-PC 1..216 1..216 1117 100 Plus
Fkbp14-PA 216 CG9847-PA 1..216 1..216 1117 100 Plus
Fkbp14-PD 220 CG9847-PD 1..220 1..216 1102 98.2 Plus