Clone Sequence Records
BO05657.3prime Sequence
859 bp (784 high quality bases) assembled on 2005-12-02
> BO05657.3prime
ATGGTCTAGAAAGCTTGCGTGAAAGACATCCATGAACGGAAAGTAGGCCT
GCTCCGGCTCGAGCAGATCCACGAGGTAGCAAACGGTGCCGGCCACACCC
TCGTACAAGCTATGCGGACGATCCGGTGTGCGGGCGCGCAGCTTGAACTC
GGCATTGGTTAGCAGCTCCATAAACTTGTGCGCCCTGTACAGGTACCTCA
TCTCGTTGGTCAGGCGGAACAGGAGCAGGAAGACATAGCCATTGCCGGCG
ACGCCATGGCAGATGCCCGGTCCCTTGCGCAGGAAGCCCTTCTTCCACAC
CATATCCGCACAGCGACGCAGCGAGGCCAAGTACTTCTCCTCCTTGAAGA
TCAGATAGGCCTTGGCCAGCACATAAACGGCGCCGGGTGCCCCATGGCAC
CAGTGCACCAGACGCTTATCCCTGCCGGAGCGCAGATCCTCCAGGGCCAC
CGGAAAGTTGCCATCGCTGTCCTGCAGCTCCAGAAAGAAGTCAATCGAGC
GCTTGATGTCGCGCAACTCGGCGGCCGGCGCCGAAATGGGAAGCGTGCGG
AACCACGGGCTGTCCAACAGCATGTGCAGAATGGCGCACAGGCCATGGGC
CGCACCCAGGTACTCCGTGCCATGGTATTGGTACATTAGCGGACACGGCG
AGTTGTTCTGCTTGCTGTACTCGCGGCCGCTGGTCACGATTAGCTGGCAT
ATGGATACCAGGTCATCGTCGGTGATCTTCTTCTCCGGCAGTACATCGTT
TAGCCAATAGCAACCGGATAGATAGCCGGCACGTCCAACCAGCACCTCAT
CGCAGCCGTATTTGGTGTGCATGAACTCCTTGCTGCACGGGATGCCCCGA
CTTGAAGTT
BO05657.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2061-PA | 1260 | CG2061-RA | 429..1257 | 847..19 | 4145 | 100 | Minus |
| CG2061-PC | 1260 | CG2061-RC | 429..1257 | 847..19 | 4145 | 100 | Minus |
| CG2061-PB | 1260 | CG2061-RB | 429..1257 | 847..19 | 4145 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 11:51:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2061-RD | 2182 | CG2061-RD | 697..1536 | 859..19 | 4180 | 99.9 | Minus |
| CG2061-RB | 2052 | CG2061-RB | 854..1693 | 859..19 | 4180 | 99.9 | Minus |
| CG2061-RA | 1990 | CG2061-RA | 792..1631 | 859..19 | 4180 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 11:51:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11093462..11094301 | 859..19 | 4155 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-13 11:51:41 has no hits.
BO05657.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:54 Download gff for
BO05657.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-PA | 418..1260 | 15..859 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:52:02 Download gff for
BO05657.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-PB | 418..1260 | 15..859 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:45:42 Download gff for
BO05657.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-RA | 792..1634 | 15..859 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:15:18 Download gff for
BO05657.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-RA | 792..1634 | 15..859 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:15:18 Download gff for
BO05657.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11093462..11094304 | 15..859 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:45:42 Download gff for
BO05657.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10987495..10988337 | 15..859 | 99 | | Minus |
BO05657.5prime Sequence
845 bp (830 high quality bases) assembled on 2005-11-29
> BO05657.5prime
GAAGTTATCAGTCGACATGGAACGCCGCTACCTGAAGAATCCCTTTCCCG
ATTTCGCCGGCGGGGAGAATACACCTTTCGCCAGCGACGAGGAGCACATC
AAAAATCTGATTTGCACCTATGTGGACGCCATACTGGAGCACTGTCATCC
GAACAGCGATGATGAGGACAATCGCGGTGATCTGTATGTGGGCAATGCCG
GCATAGCCTTCATGTTCTGGAAGCTCAACAGCTGCGAGCAGACACGCGAT
CTCTATCCGGCACTGGATCACGCGGCCTCCTTCATCCGCAATGCCAAGGT
GAATGCCAATCGGTACAAGAAGCGCTCCGCCGAGCGCTACTCCTTTCTGT
GCGGCAATGCTGGTATCTATGCCGTCTCGGCAGCCATATCGCAGGCGCTC
AAGGAGACCGAGGAGCTTTCCGACGACTTGGCCAACTTCAAGTCGGGCAT
CCCGTGCAGCAAGGAGTTCATGCACACCAAATACGGCTGCGATGAGGTGC
TGGTTGGACGTGCCGGCTATCTATCCGGTTGCTATTGGCTAAACGATGTA
CTGCCGGAGAAGAAGATCACCGACGATGACCTGGTATCCATATGCCAGCT
AATCGTGACCAGCGGCCGCGAGTACAGCAAGCAGAACAACTCGCCGTGTC
CGCTAATGTACCAATACCATGGCACGGAGTACCTGGGTGCGGCCCATGGC
CTGTGCGCCATTCTGCACATGCTGTTGGACAGCCCGTGGTTCCGCACGCT
TCCCATTTCGGCGCCGGCCGCCGAGTTGCGCGACATCAAGCGCTCGATTG
ACTTCTTTCTGGAGCTGCAGGACAGCGATGGCAACTTTCCGGTGG
BO05657.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2061-PA | 1260 | CG2061-RA | 1..829 | 17..845 | 4145 | 100 | Plus |
| CG2061-PC | 1260 | CG2061-RC | 1..829 | 17..845 | 4145 | 100 | Plus |
| CG2061-PB | 1260 | CG2061-RB | 1..829 | 17..845 | 4145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 18:54:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2061-RD | 2182 | CG2061-RD | 279..1108 | 16..845 | 4150 | 100 | Plus |
| CG2061-RB | 2052 | CG2061-RB | 436..1265 | 16..845 | 4150 | 100 | Plus |
| CG2061-RA | 1990 | CG2061-RA | 374..1203 | 16..845 | 4150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 18:53:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11093044..11093873 | 16..845 | 4150 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 18:54:01 has no hits.
BO05657.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:27:55 Download gff for
BO05657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-PA | 1..829 | 17..845 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:52:04 Download gff for
BO05657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-PB | 1..829 | 17..845 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:02:34 Download gff for
BO05657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-RA | 374..1203 | 16..845 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:15:36 Download gff for
BO05657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-RA | 374..1203 | 16..845 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:15:36 Download gff for
BO05657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11093044..11093873 | 16..845 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:02:34 Download gff for
BO05657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10987077..10987906 | 16..845 | 100 | | Plus |
BO05657.complete Sequence
1291 bp (1291 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ630121
> BO05657.complete
GAAGTTATCAGTCGACATGGAACGCCGCTACCTGAAGAATCCCTTTCCCG
ATTTCGCCGGCGGGGAGAATACACCTTTCGCCAGCGACGAGGAGCACATC
AAAAATCTGATTTGCACCTATGTGGACGCCATACTGGAGCACTGTCATCC
GAACAGCGATGATGAGGACAATCGCGGTGATCTGTATGTGGGCAATGCCG
GCATAGCCTTCATGTTCTGGAAGCTCAACAGCTGCGAGCAGACACGCGAT
CTCTATCCGGCACTGGATCACGCGGCCTCCTTCATCCGCAATGCCAAGGT
GAATGCCAATCGGTACAAGAAGCGCTCCGCCGAGCGCTACTCCTTTCTGT
GCGGCAATGCTGGTATCTATGCCGTCTCGGCAGCCATATCGCAGGCGCTC
AAGGAGACCGAGGAGCTTTCCGACGACTTGGCCAACTTCAAGTCGGGCAT
CCCGTGCAGCAAGGAGTTCATGCACACCAAATACGGCTGCGATGAGGTGC
TGGTTGGACGTGCCGGCTATCTATCCGGTTGCTATTGGCTAAACGATGTA
CTGCCGGAGAAGAAGATCACCGACGATGACCTGGTATCCATATGCCAGCT
AATCGTGACCAGCGGCCGCGAGTACAGCAAGCAGAACAACTCGCCGTGTC
CGCTAATGTACCAATACCATGGCACGGAGTACCTGGGTGCGGCCCATGGC
CTGTGCGCCATTCTGCACATGCTGTTGGACAGCCCGTGGTTCCGCACGCT
TCCCATTTCGGCGCCGGCCGCCGAGTTGCGCGACATCAAGCGCTCGATTG
ACTTCTTTCTGGAGCTGCAGGACAGCGATGGCAACTTTCCGGTGGCCCTG
GAGGATCTGCGCTCCGGCAGGGATAAGCGTCTGGTGCACTGGTGCCATGG
GGCACCCGGCGCCGTTTATGTGCTGGCCAAGGCCTATCTGATCTTCAAGG
AGGAGAAGTACTTGGCCTCGCTGCGTCGCTGTGCGGATATGGTGTGGAAG
AAGGGCTTCCTGCGCAAGGGACCGGGCATCTGCCATGGCGTCGCCGGCAA
TGGCTATGTCTTCCTGCTCCTGTTCCGCCTGACCAACGAGATGAGGTACC
TGTACAGGGCGCACAAGTTTATGGAGCTGCTAACCAATGCCGAGTTCAAG
CTGCGCGCCCGCACACCGGATCGTCCGCATAGCTTGTACGAGGGTGTGGC
CGGCACCGTTTGCTACCTCGTGGATCTGCTCGAGCCGGAGCAGGCCTACT
TTCCGTTCATGGATGTCTTTCACGCAAGCTTTCTAGACCAT
BO05657.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:46:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2061-RD | 1260 | CG2061-PD | 1..1257 | 17..1273 | 6285 | 100 | Plus |
| CG2061-RB | 1260 | CG2061-PB | 1..1257 | 17..1273 | 6285 | 100 | Plus |
| CG2061-RA | 1260 | CG2061-PA | 1..1257 | 17..1273 | 6285 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:46:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2061-RD | 2182 | CG2061-RD | 279..1536 | 16..1273 | 6290 | 100 | Plus |
| CG2061-RB | 2052 | CG2061-RB | 436..1693 | 16..1273 | 6290 | 100 | Plus |
| CG2061-RA | 1990 | CG2061-RA | 374..1631 | 16..1273 | 6290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:46:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11093044..11094301 | 16..1273 | 6290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:46:22 has no hits.
BO05657.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:29:54 Download gff for
BO05657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-RB | 1..1260 | 17..1277 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:56:23 Download gff for
BO05657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-RB | 199..1459 | 16..1277 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:31:16 Download gff for
BO05657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-RA | 375..1631 | 17..1275 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:29:54 Download gff for
BO05657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-RB | 199..1459 | 16..1277 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:37:37 Download gff for
BO05657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-RA | 375..1631 | 17..1275 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:37:37 Download gff for
BO05657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11093045..11094301 | 17..1275 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:31:16 Download gff for
BO05657.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10987078..10988334 | 17..1275 | 99 | | Plus |
BO05657.pep Sequence
Translation from 16 to 1291
> BO05657.pep
MERRYLKNPFPDFAGGENTPFASDEEHIKNLICTYVDAILEHCHPNSDDE
DNRGDLYVGNAGIAFMFWKLNSCEQTRDLYPALDHAASFIRNAKVNANRY
KKRSAERYSFLCGNAGIYAVSAAISQALKETEELSDDLANFKSGIPCSKE
FMHTKYGCDEVLVGRAGYLSGCYWLNDVLPEKKITDDDLVSICQLIVTSG
REYSKQNNSPCPLMYQYHGTEYLGAAHGLCAILHMLLDSPWFRTLPISAP
AAELRDIKRSIDFFLELQDSDGNFPVALEDLRSGRDKRLVHWCHGAPGAV
YVLAKAYLIFKEEKYLASLRRCADMVWKKGFLRKGPGICHGVAGNGYVFL
LLFRLTNEMRYLYRAHKFMELLTNAEFKLRARTPDRPHSLYEGVAGTVCY
LVDLLEPEQAYFPFMDVFHASFLDH
BO05657.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:52:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2061-PD | 419 | CG2061-PD | 1..419 | 1..419 | 2259 | 100 | Plus |
| CG2061-PB | 419 | CG2061-PB | 1..419 | 1..419 | 2259 | 100 | Plus |
| CG2061-PA | 419 | CG2061-PA | 1..419 | 1..419 | 2259 | 100 | Plus |
