Clone Sequence Records
BO05667.3prime Sequence
937 bp (823 high quality bases) assembled on 2005-12-02
> BO05667.3prime
ATGGTCTAGAAAGCTTGCGATCTTTTCGCGCTTCTTGAAATTCCTTTTCG
AAGCGCAGCGGGTGATTATATTAGAAACGTGTGGCTTATGCTCGAAGATC
TTCATTAACTGATTCTGTGCCTCGTTGATGCCATCGGTAATAATCTTGCT
GCGTTGAATGTTTCCCTTTAGCAGTTCAGTGACTCGCTCAATTTCGCTGT
GCTTCTCCTTGTCCTTTTCGAGATCCTGCAGCATGGTCTCCAGCCTGCCC
AGACTAAAGACTTCCGATTCATTCAAGTCCTCCATTTGCGAGCGTAAATG
ATAAATTTTCCATCCATTGATTTTGCCCTGCACATTTGGCTGATTGGCCA
AATCAATGACTGTGGCCCGCCGCTCCTCCCTTGGCTTAACATCAGTGTAC
CGATGAAAATGATTGTTGGCCAACTTATGTGTGGGCTTATACGTATTGAG
CAAAGCACAATTGCGCGGACGACGAATCACAAAGTCGACGGGATTTGCGT
TCTCCTTGTTGCCCGCCACAGCAGGTGTACTGTTCCGGTGGTTGGCATCG
CCTGGCGCACTGTTGGGAGCAACACCCGGGGTCGCTGCTGTCACCAGTAG
TCCTCCATTGTTGTGCTTCTGCATGTACGAAGCGCCAGCCGGCGGCGTTG
GCTCCGAACTTGGAGGTGGCAGCGATAAGGATGCTTGACTCTGCGTAGAG
TGCTGGCTGTCATTGGTCGATCGTCGCGGCTTTTTCCTAGAGGAGCAGTC
ATAACTGGAGCTGGAGCTATTACCAGTACCATTCATACGCGTTCCTTGTT
GCATCTGCGTCGATCCCACCAAATGAGGGCACTGCTGAGGCTGCTGTTGC
TGCGGCGTTGGTGCTTGCACATCCACAAAGGCACTGCTACCACTGCGGGC
TCCCAGTGAGGAGTGACCAAGGTTCTGCTGAATCGAT
BO05667.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11006-PA | 3660 | CG11006-RA | 2848..3657 | 828..19 | 4025 | 99.8 | Minus |
| CG11006-PB | 3774 | CG11006-RB | 2962..3771 | 828..19 | 4025 | 99.8 | Minus |
| CG11006-PC | 3885 | CG11006-RC | 3073..3882 | 828..19 | 4025 | 99.8 | Minus |
| CG11006-PD | 3819 | CG11006-RD | 3007..3816 | 828..19 | 4025 | 99.8 | Minus |
| CG11006-PA | 3660 | CG11006-RA | 2739..2844 | 937..832 | 530 | 100 | Minus |
| CG11006-PB | 3774 | CG11006-RB | 2853..2958 | 937..832 | 530 | 100 | Minus |
| CG11006-PC | 3885 | CG11006-RC | 2964..3069 | 937..832 | 530 | 100 | Minus |
| CG11006-PD | 3819 | CG11006-RD | 2898..3003 | 937..832 | 530 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:54:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sap130-RB | 4159 | CG11006-RB | 3031..3949 | 937..19 | 4535 | 99.7 | Minus |
| Sap130-RE | 4060 | CG11006-RE | 2932..3850 | 937..19 | 4535 | 99.7 | Minus |
| Sap130-RC | 4270 | CG11006-RC | 3142..4060 | 937..19 | 4535 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:54:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12811950..12812220 | 715..445 | 1355 | 100 | Minus |
| 3L | 28110227 | 3L | 12811665..12811886 | 937..716 | 1065 | 98.6 | Minus |
| 3L | 28110227 | 3L | 12812280..12812450 | 444..274 | 840 | 99.4 | Minus |
| 3L | 28110227 | 3L | 12812678..12812826 | 167..19 | 745 | 100 | Minus |
| 3L | 28110227 | 3L | 12812508..12812617 | 274..165 | 550 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 04:54:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2347..2380 | 865..833 | 113 | 85.3 | Minus |
BO05667.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:28:12 Download gff for
BO05667.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11006-PB | 2853..3774 | 15..937 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:52:27 Download gff for
BO05667.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11006-PC | 2964..3885 | 15..937 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:15:51 Download gff for
BO05667.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sap130-RC | 3142..4063 | 15..937 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:40:44 Download gff for
BO05667.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sap130-RC | 3142..4063 | 15..937 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:40:44 Download gff for
BO05667.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12811665..12811886 | 716..937 | 99 | -> | Minus |
| 3L | 12811950..12812220 | 445..715 | 100 | -> | Minus |
| 3L | 12812280..12812450 | 274..444 | 99 | -> | Minus |
| 3L | 12812509..12812616 | 166..273 | 100 | -> | Minus |
| 3L | 12812680..12812831 | 14..165 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:15:51 Download gff for
BO05667.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12804765..12804986 | 716..937 | 99 | -> | Minus |
| arm_3L | 12805050..12805320 | 445..715 | 100 | -> | Minus |
| arm_3L | 12805380..12805550 | 274..444 | 99 | -> | Minus |
| arm_3L | 12805609..12805716 | 166..273 | 100 | -> | Minus |
| arm_3L | 12805780..12805931 | 14..165 | 98 | -> | Minus |
BO05667.5prime Sequence
880 bp (856 high quality bases) assembled on 2005-12-02
> BO05667.5prime
GAAGTTATCAGTCGACATGAGTGCGCCTAGTGAGGGTGGCGCGGGAGGAG
GGCCGGTGGGCGGTGGAAGTACAGCTACAGCGCCATCAGCGCACCCGGCG
GTGGCCGCCAAGATCACCCACGTGAAATCCGACGGCGGCGGTGGGATATC
CATTGCGGGCACACCGATCCTCAGCGGAGGCACAATTAAGGTGGCGTCAG
CCAATCAAGTTCAACAAACTTCCCTAGGTGGCACTCCAATTGCTCTGAAT
GCAGGACAAGCGACTACGGCAGCTTCGATCCGTGCTATTGGCGCTGGTGG
TCAGTCCACACAGGTGCGGGTGGTGATGCCAATGATCAAGCAGCTAGAGA
ATGTTACGGCCACCGGAAGGACTCAGATAACAGCCATACCAGCTGCACCG
GCGAGGAGTGGGGCGAATGCATCGATCACGGTTACCAGGCCCGTAACCCA
GGCCACATACTTGCCGCGAGCCAGTGTGACGGCCACCCAAATGGGAGGCG
TTGGCGTTGGAGTTGGCCAGCGGCTCGTCACGCCATTGAGAGCCACATCA
TCGGCCACGGTTACGCCCACAGCGCCAACAGTGCTGAGCTCAACCGGAGG
ATTCGTACGCGGAGCAACAGCATCGGTGAGCAGAAGTGGAGTGGCGCTCA
CATCGCAACCATCGTCGGCTGTCATCTCGTCCAGCAACAGTGGTGCTTGG
ATGCAGAGTCAGGGACAGGTGCAACTGATCCGAACCATTCATCAGCCGCG
CCAGCGAATTATAACGACATCCGCGGGGGTTTCGAATGCCAGTGTAGTGA
CCACTACTCCAGTGCAGGCGCCAACAGCTCTTTTCCGTTCCGCTGGCCAG
CCCTTGGCGACACAACAGGCGACGGGACGG
BO05667.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:25:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11006-PA | 3660 | CG11006-RA | 1..817 | 17..833 | 4085 | 100 | Plus |
| CG11006-PB | 3774 | CG11006-RB | 185..931 | 87..833 | 3735 | 100 | Plus |
| CG11006-PC | 3885 | CG11006-RC | 296..1042 | 87..833 | 3735 | 100 | Plus |
| CG11006-PD | 3819 | CG11006-RD | 230..976 | 87..833 | 3735 | 100 | Plus |
| CG11006-PB | 3774 | CG11006-RB | 1..74 | 17..90 | 370 | 100 | Plus |
| CG11006-PC | 3885 | CG11006-RC | 1..74 | 17..90 | 370 | 100 | Plus |
| CG11006-PD | 3819 | CG11006-RD | 46..119 | 17..90 | 370 | 100 | Plus |
| CG11006-PB | 3774 | CG11006-RB | 936..976 | 838..878 | 205 | 100 | Plus |
| CG11006-PC | 3885 | CG11006-RC | 1047..1087 | 838..878 | 205 | 100 | Plus |
| CG11006-PD | 3819 | CG11006-RD | 981..1021 | 838..878 | 205 | 100 | Plus |
| CG11006-PA | 3660 | CG11006-RA | 822..862 | 838..878 | 205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:22:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sap130-RA | 4045 | CG11006-RA | 179..1040 | 17..878 | 4265 | 99.8 | Plus |
| Sap130-RG | 4018 | CG11006-RG | 179..1040 | 17..878 | 4265 | 99.8 | Plus |
| Sap130-RF | 4015 | CG11006-RF | 179..1040 | 17..878 | 4265 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:22:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12807090..12807830 | 87..827 | 3705 | 100 | Plus |
| 3L | 28110227 | 3L | 12806265..12806337 | 17..89 | 365 | 100 | Plus |
| 3L | 28110227 | 3L | 12807884..12807936 | 826..878 | 220 | 94.3 | Plus |
Blast to na_te.dros performed on 2015-02-12 01:22:32 has no hits.
BO05667.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:28:13 Download gff for
BO05667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11006-PA | 1..864 | 17..880 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:52:29 Download gff for
BO05667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11006-PA | 1..864 | 17..880 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:41:58 Download gff for
BO05667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sap130-RF | 179..1042 | 17..880 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:32:07 Download gff for
BO05667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sap130-RF | 179..1042 | 17..880 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:32:07 Download gff for
BO05667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12806265..12806337 | 17..89 | 100 | -> | Plus |
| 3L | 12807093..12807830 | 90..827 | 100 | -> | Plus |
| 3L | 12807886..12807938 | 828..880 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:41:58 Download gff for
BO05667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12799365..12799437 | 17..89 | 100 | -> | Plus |
| arm_3L | 12800193..12800930 | 90..827 | 100 | -> | Plus |
| arm_3L | 12800986..12801038 | 828..880 | 94 | | Plus |
BO05667.complete Sequence
3691 bp assembled on 2008-08-14
GenBank Submission: FJ630129
> BO05667.complete
GAAGTTATCAGTCGACATGAGTGCGCCTAGTGAGGGTGGCGCGGGAGGAG
GGCCGGTGGGCGGTGGAAGTACAGCTACAGCGCCATCAGCGCACCCGGCG
GTGGCCGCCAAGATCACCCACGTGAAATCCGACGGCGGCGGTGGGATATC
CATTGCGGGCACACCGATCCTCAGCGGAGGCACAATTAAGGTGGCGTCAG
CCAATCAAGTTCAACAAACTTCCCTAGGTGGCACTCCAATTGCTCTGAAT
GCAGGACAAGCGACTACGGCAGCTTCGATCCGTGCTATTGGCGCTGGTGG
TCAGTCCACACAGGTGCGGGTGGTGATGCCAATGATCAAGCAGCTAGAGA
ATGTTACGGCCACCGGAAGGACTCAGATAACAGCCATACCAGCTGCACCG
GCGAGGAGTGGGGCGAATGCATCGATCACGGTTACCAGGCCCGTAACCCA
GGCCACATACTTGCCGCGAGCCAGTGTGACGGCCACCCAAATGGGAGGCG
TTGGCGTTGGAGTTGGCCAGCGGCTCGTCACGCCATTGAGAGCCACATCA
TCGGCCACGGTTACGCCCACAGCGCCAACAGTGCTGAGCTCAACCGGAGG
ATTCGTACGCGGAGCAACAGCATCGGTGAGCAGAAGTGGAGTGGCGCTCA
CATCGCAACCATCGTCGGCTGTCATCTCGTCCAGCAACAGTGGTGCTTGG
ATGCAGAGTCAGGGACAGGTGCAACTGATCCGAACCATTCATCAGCCGCG
CCAGCGAATTATAACGACATCCGCGGGGGTTTCGAATGCCAGTGTAGTGA
CCACTACTCCAGTGCAGGCGCCAACAGCTCTTTCCGTTTCCGCTGGCCAG
CCCTTGGCGACACAACAGGCGACGGGACCGGGAGGAGGTCCTCAGGCCTA
TGTGGCTACTGTATTGCCACAGAGGCAGCATCAGGCTACACTAGTTTACT
CCTCCAATGTGTCTGCACCGAATGCAAGTCAGAATCCGGGTCAGCAATTT
AATCCACGCTTTGCTGTGGCCACGCCCACAGGCGGAGTAACAACAACGAC
GCCCGGTGGAACGACAGTAACACCTCGACAGGTGCGACCAATTCCGCTGG
GCAAGAGTTTTCCAACCGCTAAGCTGAACACAACCAGCATAAGTATCAGG
GCACCAAGCATACCGCAGCTGAATACCAGCGTTACGGCATCTCCAACGGC
CGTTAGTGTTTCCGGTGGAGCAACAGTGGCACCCGGGCGGGGTCCCGGAG
CCGGAGGAACTGCTCTGACGGCCACTAATTTGCCCACCACACGGATCATT
CAGCTGCAGCAGCCAGCGACGGGAACCACTCAACAGATCATCGGATCCGG
AGCTCGTCTGGCCGGGAACGTGATGCTGCAGCCATTCTTGATGAGCACTA
CCGCGGCGGCTAAGATGGGCATTCGTCCACCTGTCACCATGACCGCTAAG
GTTCAGCCATCGCTAACTATTACACAGCTTAATCCCATCGGAAAACTGTC
AGCTGGCGGAGGAAGTGGAGGACAAACAATGGGGCCGCAGGGCGTGGCCA
GCATCCAGGCGGTGCCAGTGCCGAATGTCTCTGCCAGTGTGGTCAATTCA
AGCTCGGTGACGGGTGCCACATCGGCGGCCGGTGGAGCCACTGTCCTGCC
ACTTACCATCAGTGGCAGGGGAGCGGGAGTGGGACCAGGCGGTAATATCC
TCACGGGAACTCTGACGCCCATCAAGAACGCAAGCGGCATCACTTTGGGC
AAGATGATGATGGCACCAGCTTCTTCTGCCCCTGGAGCAGATGGTTCCAG
CACAAGCGGGGCAACAGTGACGGGCTTTCAACGCACCTGGAATCCTGTAG
TTGCTTCACAGAGCCAGTTGATGAAGATCGATGAGAAGGGAAGTGCTGCC
ACAATCTACTACGAATCTATGCCAGCCTCCGCCTCCACAGGCGTTCTATC
ATTGACTACGACAACAGTGACGCAGAGCACCCAGGCGCAGGCACAATTGG
TTAGCAGCGCCGGTGGCAGCTTGTCGGTATCTTCGTTACCCTTTGCAAGT
CACGCGACTGCCGGAGCGGGATCAGGTGGCGGCGGATCGCAGGCTACTTT
TACGGTGTTGCCGTCGGGGGCTGGTGGAACAGCCACCCGAACCATTGGCC
ACCAGCAATTGATAATACCAGCAGGACCAAATAGTGCGCCGCCGCAGCAC
ATGGTTATTCCGCTGCATACGTCCGTTAAGGTGACCACGGGAGCGGGCAA
TCCGCAACAAGCAACTGCAAGTGGAGCACTGGTGTCCAGCTTTATGCGCA
AGCGGGATGCGGAAGGTTCGCCAATACGGGCGGCTAAAAATCTAGGACCC
ACTTTGCTTTCAATGGCTAGCAATAACAGTGGACAAAACATGCCACCGGC
TCCGGGCACCACGTTCAACATTCAGCCGGTGTCCGTGACAGTGCCTCAAT
CAGTTGGCTCTGGGCTGACCGTAGAGGCGCTGGCCAAGAAGGAACGGGAG
CGAGTCACCCATGGTGTAGCAAGTAGCGCCGCTAGTGTGCCTGCCACAGT
TGGCCCCGTGAACTCAACGAGAAATTCGAGGGCGGACTCGCCGGCTTCGT
CGGACGGCTCAACTACAGTGTCGGCGAATTCCTCACCTGGTGTGGATCAG
CAATTACAGGACAGGATTGGCGATCAGCCAGCCACGGGAGGCGCTGGTGG
GCGCGATAATTCCACGCATTTTAATCCCATTAATGAGATGTACTCATCAC
ACCAATCGATTCAGCAGAACCTTGGTCACTCCTCACTGGGAGCCCGCAGT
GGTAGCAGTGCCTTTGTGGATGTGCAAGCACCAACGCCGCAGCAACAGCA
GCCTCAGCAGGTGCCTCATTTGGTGGGATCGACGCAGATGCAACAAGGAA
CGCGTATGAATGGTACTGGTAATAGCTCCAGCTCCAGTTATGACTGCTCC
TCTAGGAAAAAGCCGCGACGATCGACCAATGACAGCCAGCACTCTACGCA
GAGTCAAGCATCCTTATCGCTGCCACCTCCAAGTTCGGAGCCAACGCCGC
CGGCTGGCGCTTCGTACATGCAGAAGCACAACAATGGAGGACTACTGGTG
ACAGCAGCGACCCCGGGTGTTGCTCCCAACAGTGCGCCAGGCGATGCCAA
CCACCGGAACAGTACACCTGCTGTGGCGGGCAACAAGGAGAACGCAAATC
CCGTCGACTTTGTGATTCGTCGTCCGCGCAATTGTGCTTTGCTCAATACG
TATAAGCCCACACATAAGTTGGCCAACAATCATTTTCATCGGTACACTGA
TGTTAAGCCAAGGGAGGAGCGGCGGGCCACAGTCATTGATTTGGCCAATC
AGCCAAATGTGCAGGGCAAAATCAATGGATGGAAAATTTATCATTTACGC
TCGCAAATGGAGGACTTGAATGAATCGGAAGTCTTTAGTCTGGGCAGGCT
GGAGACCATGCTGCAGGATCTCGAAAAGGACAAGGAGAAGCACAGCGAAA
TTGAGCGAGTCACTGAACTGCTAAAGGGAAACATTCAACGCAGCAAGATT
ATTACCGATGGCATCAACGAGGCACAGAATCAGTTAATGAAGATCTTCGA
GCATAAGCCACACGTTTCTAATATAATCACCCGCTGCGCTTCGAAAAGGA
ATTTCAAGAAGCGCGAAAAGATCGCAAGCTTTCTAGACCAT
BO05667.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:27:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sap130-RA | 3660 | CG11006-PA | 1..3657 | 17..3673 | 18270 | 100 | Plus |
| Sap130-RB | 3774 | CG11006-PB | 185..3771 | 87..3673 | 17920 | 100 | Plus |
| Sap130-RE | 3774 | CG11006-PE | 185..3771 | 87..3673 | 17920 | 100 | Plus |
| Sap130-RB | 3774 | CG11006-PB | 1..74 | 17..90 | 370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:27:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sap130-RA | 4045 | CG11006-RA | 179..3835 | 17..3673 | 18270 | 100 | Plus |
| Sap130-RB | 4159 | CG11006-RB | 363..3949 | 87..3673 | 17920 | 100 | Plus |
| Sap130-RE | 4060 | CG11006-RE | 264..3850 | 87..3673 | 17920 | 100 | Plus |
| Sap130-RB | 4159 | CG11006-RB | 179..252 | 17..90 | 370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:27:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12810726..12811592 | 1875..2741 | 4320 | 99.9 | Plus |
| 3L | 28110227 | 3L | 12807090..12807830 | 87..827 | 3705 | 100 | Plus |
| 3L | 28110227 | 3L | 12807884..12808477 | 826..1419 | 2970 | 100 | Plus |
| 3L | 28110227 | 3L | 12810205..12810663 | 1418..1876 | 2295 | 100 | Plus |
| 3L | 28110227 | 3L | 12811950..12812220 | 2977..3247 | 1355 | 100 | Plus |
| 3L | 28110227 | 3L | 12811646..12811886 | 2736..2976 | 1205 | 100 | Plus |
| 3L | 28110227 | 3L | 12812280..12812450 | 3248..3418 | 840 | 99.4 | Plus |
| 3L | 28110227 | 3L | 12812678..12812826 | 3525..3673 | 745 | 100 | Plus |
| 3L | 28110227 | 3L | 12812508..12812617 | 3418..3527 | 550 | 100 | Plus |
| 3L | 28110227 | 3L | 12806265..12806337 | 17..89 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:27:13 has no hits.
BO05667.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:42:36 Download gff for
BO05667.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11006-RE | 80..155 | 17..94 | 97 | <- | Plus |
| CG11006-RE | 272..3853 | 95..3677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:54:13 Download gff for
BO05667.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sap130-RA | 179..3835 | 17..3675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:55:16 Download gff for
BO05667.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11006-RE | 80..155 | 17..94 | 97 | <- | Plus |
| CG11006-RE | 272..3850 | 95..3675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:25:47 Download gff for
BO05667.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sap130-RA | 179..3835 | 17..3675 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:25:47 Download gff for
BO05667.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12806265..12806337 | 17..89 | 100 | -> | Plus |
| 3L | 12807093..12807830 | 90..827 | 100 | -> | Plus |
| 3L | 12807886..12808476 | 828..1418 | 100 | -> | Plus |
| 3L | 12810206..12810663 | 1419..1876 | 100 | -> | Plus |
| 3L | 12810728..12811588 | 1877..2737 | 100 | -> | Plus |
| 3L | 12811648..12811886 | 2738..2976 | 100 | -> | Plus |
| 3L | 12811950..12812220 | 2977..3247 | 100 | -> | Plus |
| 3L | 12812280..12812450 | 3248..3418 | 99 | -> | Plus |
| 3L | 12812509..12812616 | 3419..3526 | 100 | -> | Plus |
| 3L | 12812680..12812826 | 3527..3675 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:54:13 Download gff for
BO05667.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12799365..12799437 | 17..89 | 100 | -> | Plus |
| arm_3L | 12800193..12800930 | 90..827 | 100 | -> | Plus |
| arm_3L | 12800986..12801576 | 828..1418 | 100 | -> | Plus |
| arm_3L | 12803306..12803763 | 1419..1876 | 100 | -> | Plus |
| arm_3L | 12803828..12804688 | 1877..2737 | 100 | -> | Plus |
| arm_3L | 12804748..12804986 | 2738..2976 | 100 | -> | Plus |
| arm_3L | 12805050..12805320 | 2977..3247 | 100 | -> | Plus |
| arm_3L | 12805380..12805550 | 3248..3418 | 99 | -> | Plus |
| arm_3L | 12805609..12805716 | 3419..3526 | 100 | -> | Plus |
| arm_3L | 12805780..12805926 | 3527..3675 | 98 | | Plus |
BO05667.pep Sequence
Translation from 16 to 3691
> BO05667.pep
MSAPSEGGAGGGPVGGGSTATAPSAHPAVAAKITHVKSDGGGGISIAGTP
ILSGGTIKVASANQVQQTSLGGTPIALNAGQATTAASIRAIGAGGQSTQV
RVVMPMIKQLENVTATGRTQITAIPAAPARSGANASITVTRPVTQATYLP
RASVTATQMGGVGVGVGQRLVTPLRATSSATVTPTAPTVLSSTGGFVRGA
TASVSRSGVALTSQPSSAVISSSNSGAWMQSQGQVQLIRTIHQPRQRIIT
TSAGVSNASVVTTTPVQAPTALSVSAGQPLATQQATGPGGGPQAYVATVL
PQRQHQATLVYSSNVSAPNASQNPGQQFNPRFAVATPTGGVTTTTPGGTT
VTPRQVRPIPLGKSFPTAKLNTTSISIRAPSIPQLNTSVTASPTAVSVSG
GATVAPGRGPGAGGTALTATNLPTTRIIQLQQPATGTTQQIIGSGARLAG
NVMLQPFLMSTTAAAKMGIRPPVTMTAKVQPSLTITQLNPIGKLSAGGGS
GGQTMGPQGVASIQAVPVPNVSASVVNSSSVTGATSAAGGATVLPLTISG
RGAGVGPGGNILTGTLTPIKNASGITLGKMMMAPASSAPGADGSSTSGAT
VTGFQRTWNPVVASQSQLMKIDEKGSAATIYYESMPASASTGVLSLTTTT
VTQSTQAQAQLVSSAGGSLSVSSLPFASHATAGAGSGGGGSQATFTVLPS
GAGGTATRTIGHQQLIIPAGPNSAPPQHMVIPLHTSVKVTTGAGNPQQAT
ASGALVSSFMRKRDAEGSPIRAAKNLGPTLLSMASNNSGQNMPPAPGTTF
NIQPVSVTVPQSVGSGLTVEALAKKERERVTHGVASSAASVPATVGPVNS
TRNSRADSPASSDGSTTVSANSSPGVDQQLQDRIGDQPATGGAGGRDNST
HFNPINEMYSSHQSIQQNLGHSSLGARSGSSAFVDVQAPTPQQQQPQQVP
HLVGSTQMQQGTRMNGTGNSSSSSYDCSSRKKPRRSTNDSQHSTQSQASL
SLPPPSSEPTPPAGASYMQKHNNGGLLVTAATPGVAPNSAPGDANHRNST
PAVAGNKENANPVDFVIRRPRNCALLNTYKPTHKLANNHFHRYTDVKPRE
ERRATVIDLANQPNVQGKINGWKIYHLRSQMEDLNESEVFSLGRLETMLQ
DLEKDKEKHSEIERVTELLKGNIQRSKIITDGINEAQNQLMKIFEHKPHV
SNIITRCASKRNFKKREKIASFLDH
BO05667.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 03:05:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sap130-PA | 1219 | CG11006-PA | 1..1219 | 1..1219 | 6140 | 100 | Plus |
| Sap130-PB | 1257 | CG11006-PB | 1..1257 | 1..1219 | 6091 | 97 | Plus |
| Sap130-PE | 1257 | CG11006-PE | 1..1257 | 1..1219 | 6091 | 97 | Plus |
| Sap130-PG | 1210 | CG11006-PG | 1..1210 | 1..1219 | 6074 | 99.3 | Plus |
| Sap130-PF | 1209 | CG11006-PF | 1..1209 | 1..1219 | 6068 | 99.2 | Plus |
