Clone BO05674 Report

Search the DGRC for BO05674

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:56
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG6697-RA
Protein status:BO05674.pep: validated full length
Sequenced Size:994

Clone Sequence Records

BO05674.3prime Sequence

886 bp (823 high quality bases) assembled on 2005-12-02

> BO05674.3prime
ATGGTCTAGAAAGCTTGCGGAGTTCTTCTTGGGATGGTAGTGCTCCCACT
TGCGATGGTTTAGCGAATTGAAATCCGGGCAGTGGTGAGCGATTTTGCGC
AAATAGTCGGACAACTTGAGCAGCTCGGTGTCCGTGCCACGGTTGAGATG
AGCCTGACGGAATGGGCGGATCTTTAGGCCGGACTTTGGGTTCATAAGGA
AGTTGCGACGGATGTCATCAAACATGATAGTGTTGCTCGAGTTGTATTGC
TTGTACAGGGCCCAGATTACACCAAGCGGCTTTACGTCCACCACACCGCG
CTCCGGCACATGAACTGATATCATGGCGGTGGAGTCCAGATAGAACATCA
CCTTGTAGTTATCGTTACTGGCCACGCCCAGCAGGCGCATCTTTTCCTCG
ATCCAGCGCATGCTGGTGGCGGACCAGATGACAATGTCGTAGTCCTCGTA
GGCGGAAGTCAGAAACTCGTGCAGATACGGACGCATTAGCTCCGTGCCTG
TTTCAGCAGGCGATCGGTGATCGAATAGGGTATAGTCTATGTCCAGGACA
AGCAGCTTCTTGCCCTCACGCGGCGGCGCTAACTCCTTGATCTTGTAGTC
TCGCACACGACGCTGCACCTTGGCCAAATAGACGGCGGAGTGCTCCACGG
ACTCTTCGCGTTCATCGGCGTCATCGAAGTCGTCGACCACTTCGCCAATA
TTATCGGGCAGGCTGCACGCATCCTCGATATCGGCCTCTGTGGAGCCCAC
CATCATAAGCTTAAAGTTGGGCTTCAGCTCCAAAGCGCTGATCTTCACAT
TGTCGGCTGCTGTCTTTCCTTTGTACTTCAGGTTGAGCAGCTTTTGACGT
CCCGGACGCACCTGTGTCTTGCGGAATATCTCGTGA

BO05674.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:26:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG6697-PA 963 CG6697-RA 93..960 886..19 4315 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 15:56:19
Subject Length Description Subject Range Query Range Score Percent Strand
Ublcp1-RA 1202 CG6697-RA 260..1127 886..19 4325 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 15:56:17
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23061875..23062676 820..19 4010 100 Minus
3R 32079331 3R 23061752..23061820 886..818 330 98.6 Minus
Blast to na_te.dros performed on 2015-02-12 15:56:18 has no hits.

BO05674.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:28:22 Download gff for BO05674.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6697-PA 94..963 16..885 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:52:40 Download gff for BO05674.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6697-PA 94..963 16..885 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:10:36 Download gff for BO05674.3prime
Subject Subject Range Query Range Percent Splice Strand
Ublcp1-RA 261..1134 11..885 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:27:54 Download gff for BO05674.3prime
Subject Subject Range Query Range Percent Splice Strand
Ublcp1-RA 261..1134 11..885 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:27:54 Download gff for BO05674.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 23061753..23061819 819..885 98 -> Minus
3R 23061877..23062683 11..818 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:10:36 Download gff for BO05674.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18887475..18887541 819..885 98 -> Minus
arm_3R 18887599..18888405 11..818 99   Minus

BO05674.5prime Sequence

942 bp (806 high quality bases) assembled on 2005-11-29

> BO05674.5prime
GAAGTTATCAGTCGACATGGAGGTCAAAGAAGTGGTAGTGATTGTAAAAT
GGAGTGGTAAGGAGTACCCGGTGGACCTCACCGACCAGGACACCGTGGAA
GTGCTGCGTCACGAGATATTCCGCAAGACACAGGTGCGTCCGGAACGTCA
AAAGCTGCTCAACCTGAAGTACAAAGGAAAGACAGCAGCCGACAATGTGA
AGATCAGCGCTTTGGAGCTGAAGCCCAACTTTAAGCTTATGATGGTGGGC
TCCACAGAGGCCGATATCGAGGATGCGTGCAGCCTGCCCGATAATATTGG
CGAAGTGGTCGACGACTTCGATGACGCCGATGAACGCGAAGAGTCCGTGG
AGCACTCCGCCGTCTATTTGGCCAAGGTGCAGCGTCGTGTGCGAGACTAC
AAGATCAAGGAGTTAGCGCCGCCGCGTGAGGGCAAGAAGCTGCTTGTCCT
GGACATAGACTATACCCTATTCGATCACCGATCGCCTGCTGAAACAGGCA
CGGAGCTAATGCGTCCGTATCTGCACGAGTTTCTGACTTCCGCCTACGAG
GACTACGACATTGTCATCTGGTCCGCCACCAGCATGCGCTGGATCGAGGA
AAAGATGCGCCTGCTGGGCGTGGCCAGTAACGATAACTACAAGGTGATGT
TCTATCTGGACTCCACCGCCATGATATCAGTTCATGTGCCGGAGCGCGGT
GTGGTGGACGTAAAGCCGCTTGGTGTAATCTGGGCCCTGTACAAGCAATA
CAACTCGAGCAACACTATCATGTTTGATGACATCCGTCGCAACTTCCTTA
TGAACCCAAAGTCCGGCCTAAAGATCCGCCCATTCCGTCAGGCTCATCTC
AACCGTGGCACGGACACCGAGCTGCTCAAGTTGTCCGACTATTTGCGCAA
AATCGCTCACCACTGCCCGGAATTTCATTTCCCTAAACCATC

BO05674.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:26:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG6697-PA 963 CG6697-RA 1..905 17..921 4525 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:44:34
Subject Length Description Subject Range Query Range Score Percent Strand
Ublcp1-RA 1202 CG6697-RA 168..1092 17..942 4575 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:44:27
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23061875..23062641 175..942 3760 99.6 Plus
3R 32079331 3R 23061660..23061820 17..177 805 100 Plus
Blast to na_te.dros performed on 2015-02-12 06:44:31 has no hits.

BO05674.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:28:23 Download gff for BO05674.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6697-PA 1..925 17..942 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:52:41 Download gff for BO05674.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6697-PA 1..925 17..942 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:29:56 Download gff for BO05674.5prime
Subject Subject Range Query Range Percent Splice Strand
Ublcp1-RA 160..1092 9..942 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:11:38 Download gff for BO05674.5prime
Subject Subject Range Query Range Percent Splice Strand
Ublcp1-RA 160..1092 9..942 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:11:38 Download gff for BO05674.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 23061652..23061819 9..176 97 -> Plus
3R 23061877..23062641 177..942 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:29:56 Download gff for BO05674.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18887374..18887541 9..176 97 -> Plus
arm_3R 18887599..18888363 177..942 99   Plus

BO05674.complete Sequence

994 bp (994 high quality bases) assembled on 2005-10-17

GenBank Submission: FJ630132

> BO05674.complete
GAAGTTATCAGTCGACATGGAGGTCAAAGAAGTGGTAGTGATTGTAAAAT
GGAGTGGTAAGGAGTACCCGGTGGACCTCACCGACCAGGACACCGTGGAA
GTGCTGCGTCACGAGATATTCCGCAAGACACAGGTGCGTCCGGAACGTCA
AAAGCTGCTCAACCTGAAGTACAAAGGAAAGACAGCAGCCGACAATGTGA
AGATCAGCGCTTTGGAGCTGAAGCCCAACTTTAAGCTTATGATGGTGGGC
TCCACAGAGGCCGATATCGAGGATGCGTGCAGCCTGCCCGATAATATTGG
CGAAGTGGTCGACGACTTCGATGACGCCGATGAACGCGAAGAGTCCGTGG
AGCACTCCGCCGTCTATTTGGCCAAGGTGCAGCGTCGTGTGCGAGACTAC
AAGATCAAGGAGTTAGCGCCGCCGCGTGAGGGCAAGAAGCTGCTTGTCCT
GGACATAGACTATACCCTATTCGATCACCGATCGCCTGCTGAAACAGGCA
CGGAGCTAATGCGTCCGTATCTGCACGAGTTTCTGACTTCCGCCTACGAG
GACTACGACATTGTCATCTGGTCCGCCACCAGCATGCGCTGGATCGAGGA
AAAGATGCGCCTGCTGGGCGTGGCCAGTAACGATAACTACAAGGTGATGT
TCTATCTGGACTCCACCGCCATGATATCAGTTCATGTGCCGGAGCGCGGT
GTGGTGGACGTAAAGCCGCTTGGTGTAATCTGGGCCCTGTACAAGCAATA
CAACTCGAGCAACACTATCATGTTTGATGACATCCGTCGCAACTTCCTTA
TGAACCCAAAGTCCGGCCTAAAGATCCGCCCATTCCGTCAGGCTCATCTC
AACCGTGGCACGGACACCGAGCTGCTCAAGTTGTCCGACTATTTGCGCAA
AATCGCTCACCACTGCCCGGATTTCAATTCGCTAAACCATCGCAAGTGGG
AGCACTACCATCCCAAGAAGAACTCCGCAAGCTTTCTAGACCAT

BO05674.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:47:36
Subject Length Description Subject Range Query Range Score Percent Strand
Ublcp1-RA 963 CG6697-PA 1..960 17..976 4800 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:47:37
Subject Length Description Subject Range Query Range Score Percent Strand
Ublcp1-RA 1202 CG6697-RA 168..1127 17..976 4800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:47:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23061875..23062676 175..976 4010 100 Plus
3R 32079331 3R 23061660..23061820 17..177 805 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:47:35 has no hits.

BO05674.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:29:58 Download gff for BO05674.complete
Subject Subject Range Query Range Percent Splice Strand
CG6697-RA 1..963 17..979 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:56:28 Download gff for BO05674.complete
Subject Subject Range Query Range Percent Splice Strand
CG6697-RA 158..1132 9..984 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:35 Download gff for BO05674.complete
Subject Subject Range Query Range Percent Splice Strand
Ublcp1-RA 168..1127 17..978 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:29:58 Download gff for BO05674.complete
Subject Subject Range Query Range Percent Splice Strand
CG6697-RA 158..1132 9..984 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:27:05 Download gff for BO05674.complete
Subject Subject Range Query Range Percent Splice Strand
Ublcp1-RA 168..1127 17..978 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:27:05 Download gff for BO05674.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23061660..23061819 17..176 100 -> Plus
3R 23061877..23062676 177..978 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:35 Download gff for BO05674.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18887382..18887541 17..176 100 -> Plus
arm_3R 18887599..18888398 177..978 99   Plus

BO05674.pep Sequence

Translation from 16 to 994

> BO05674.pep
MEVKEVVVIVKWSGKEYPVDLTDQDTVEVLRHEIFRKTQVRPERQKLLNL
KYKGKTAADNVKISALELKPNFKLMMVGSTEADIEDACSLPDNIGEVVDD
FDDADEREESVEHSAVYLAKVQRRVRDYKIKELAPPREGKKLLVLDIDYT
LFDHRSPAETGTELMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLL
GVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNT
IMFDDIRRNFLMNPKSGLKIRPFRQAHLNRGTDTELLKLSDYLRKIAHHC
PDFNSLNHRKWEHYHPKKNSASFLDH

BO05674.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:51:53
Subject Length Description Subject Range Query Range Score Percent Strand
Ublcp1-PA 320 CG6697-PA 1..320 1..320 1678 100 Plus