Clone Sequence Records
BO05674.3prime Sequence
886 bp (823 high quality bases) assembled on 2005-12-02
> BO05674.3prime
ATGGTCTAGAAAGCTTGCGGAGTTCTTCTTGGGATGGTAGTGCTCCCACT
TGCGATGGTTTAGCGAATTGAAATCCGGGCAGTGGTGAGCGATTTTGCGC
AAATAGTCGGACAACTTGAGCAGCTCGGTGTCCGTGCCACGGTTGAGATG
AGCCTGACGGAATGGGCGGATCTTTAGGCCGGACTTTGGGTTCATAAGGA
AGTTGCGACGGATGTCATCAAACATGATAGTGTTGCTCGAGTTGTATTGC
TTGTACAGGGCCCAGATTACACCAAGCGGCTTTACGTCCACCACACCGCG
CTCCGGCACATGAACTGATATCATGGCGGTGGAGTCCAGATAGAACATCA
CCTTGTAGTTATCGTTACTGGCCACGCCCAGCAGGCGCATCTTTTCCTCG
ATCCAGCGCATGCTGGTGGCGGACCAGATGACAATGTCGTAGTCCTCGTA
GGCGGAAGTCAGAAACTCGTGCAGATACGGACGCATTAGCTCCGTGCCTG
TTTCAGCAGGCGATCGGTGATCGAATAGGGTATAGTCTATGTCCAGGACA
AGCAGCTTCTTGCCCTCACGCGGCGGCGCTAACTCCTTGATCTTGTAGTC
TCGCACACGACGCTGCACCTTGGCCAAATAGACGGCGGAGTGCTCCACGG
ACTCTTCGCGTTCATCGGCGTCATCGAAGTCGTCGACCACTTCGCCAATA
TTATCGGGCAGGCTGCACGCATCCTCGATATCGGCCTCTGTGGAGCCCAC
CATCATAAGCTTAAAGTTGGGCTTCAGCTCCAAAGCGCTGATCTTCACAT
TGTCGGCTGCTGTCTTTCCTTTGTACTTCAGGTTGAGCAGCTTTTGACGT
CCCGGACGCACCTGTGTCTTGCGGAATATCTCGTGA
BO05674.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:26:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6697-PA | 963 | CG6697-RA | 93..960 | 886..19 | 4315 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 15:56:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ublcp1-RA | 1202 | CG6697-RA | 260..1127 | 886..19 | 4325 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 15:56:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23061875..23062676 | 820..19 | 4010 | 100 | Minus |
3R | 32079331 | 3R | 23061752..23061820 | 886..818 | 330 | 98.6 | Minus |
Blast to na_te.dros performed on 2015-02-12 15:56:18 has no hits.
BO05674.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:28:22 Download gff for
BO05674.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6697-PA | 94..963 | 16..885 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:52:40 Download gff for
BO05674.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6697-PA | 94..963 | 16..885 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:10:36 Download gff for
BO05674.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ublcp1-RA | 261..1134 | 11..885 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:27:54 Download gff for
BO05674.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ublcp1-RA | 261..1134 | 11..885 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:27:54 Download gff for
BO05674.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23061753..23061819 | 819..885 | 98 | -> | Minus |
3R | 23061877..23062683 | 11..818 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:10:36 Download gff for
BO05674.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18887475..18887541 | 819..885 | 98 | -> | Minus |
arm_3R | 18887599..18888405 | 11..818 | 99 | | Minus |
BO05674.5prime Sequence
942 bp (806 high quality bases) assembled on 2005-11-29
> BO05674.5prime
GAAGTTATCAGTCGACATGGAGGTCAAAGAAGTGGTAGTGATTGTAAAAT
GGAGTGGTAAGGAGTACCCGGTGGACCTCACCGACCAGGACACCGTGGAA
GTGCTGCGTCACGAGATATTCCGCAAGACACAGGTGCGTCCGGAACGTCA
AAAGCTGCTCAACCTGAAGTACAAAGGAAAGACAGCAGCCGACAATGTGA
AGATCAGCGCTTTGGAGCTGAAGCCCAACTTTAAGCTTATGATGGTGGGC
TCCACAGAGGCCGATATCGAGGATGCGTGCAGCCTGCCCGATAATATTGG
CGAAGTGGTCGACGACTTCGATGACGCCGATGAACGCGAAGAGTCCGTGG
AGCACTCCGCCGTCTATTTGGCCAAGGTGCAGCGTCGTGTGCGAGACTAC
AAGATCAAGGAGTTAGCGCCGCCGCGTGAGGGCAAGAAGCTGCTTGTCCT
GGACATAGACTATACCCTATTCGATCACCGATCGCCTGCTGAAACAGGCA
CGGAGCTAATGCGTCCGTATCTGCACGAGTTTCTGACTTCCGCCTACGAG
GACTACGACATTGTCATCTGGTCCGCCACCAGCATGCGCTGGATCGAGGA
AAAGATGCGCCTGCTGGGCGTGGCCAGTAACGATAACTACAAGGTGATGT
TCTATCTGGACTCCACCGCCATGATATCAGTTCATGTGCCGGAGCGCGGT
GTGGTGGACGTAAAGCCGCTTGGTGTAATCTGGGCCCTGTACAAGCAATA
CAACTCGAGCAACACTATCATGTTTGATGACATCCGTCGCAACTTCCTTA
TGAACCCAAAGTCCGGCCTAAAGATCCGCCCATTCCGTCAGGCTCATCTC
AACCGTGGCACGGACACCGAGCTGCTCAAGTTGTCCGACTATTTGCGCAA
AATCGCTCACCACTGCCCGGAATTTCATTTCCCTAAACCATC
BO05674.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:26:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6697-PA | 963 | CG6697-RA | 1..905 | 17..921 | 4525 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:44:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ublcp1-RA | 1202 | CG6697-RA | 168..1092 | 17..942 | 4575 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:44:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23061875..23062641 | 175..942 | 3760 | 99.6 | Plus |
3R | 32079331 | 3R | 23061660..23061820 | 17..177 | 805 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 06:44:31 has no hits.
BO05674.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:28:23 Download gff for
BO05674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6697-PA | 1..925 | 17..942 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:52:41 Download gff for
BO05674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6697-PA | 1..925 | 17..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:29:56 Download gff for
BO05674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ublcp1-RA | 160..1092 | 9..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:11:38 Download gff for
BO05674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ublcp1-RA | 160..1092 | 9..942 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:11:38 Download gff for
BO05674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23061652..23061819 | 9..176 | 97 | -> | Plus |
3R | 23061877..23062641 | 177..942 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:29:56 Download gff for
BO05674.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18887374..18887541 | 9..176 | 97 | -> | Plus |
arm_3R | 18887599..18888363 | 177..942 | 99 | | Plus |
BO05674.complete Sequence
994 bp (994 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ630132
> BO05674.complete
GAAGTTATCAGTCGACATGGAGGTCAAAGAAGTGGTAGTGATTGTAAAAT
GGAGTGGTAAGGAGTACCCGGTGGACCTCACCGACCAGGACACCGTGGAA
GTGCTGCGTCACGAGATATTCCGCAAGACACAGGTGCGTCCGGAACGTCA
AAAGCTGCTCAACCTGAAGTACAAAGGAAAGACAGCAGCCGACAATGTGA
AGATCAGCGCTTTGGAGCTGAAGCCCAACTTTAAGCTTATGATGGTGGGC
TCCACAGAGGCCGATATCGAGGATGCGTGCAGCCTGCCCGATAATATTGG
CGAAGTGGTCGACGACTTCGATGACGCCGATGAACGCGAAGAGTCCGTGG
AGCACTCCGCCGTCTATTTGGCCAAGGTGCAGCGTCGTGTGCGAGACTAC
AAGATCAAGGAGTTAGCGCCGCCGCGTGAGGGCAAGAAGCTGCTTGTCCT
GGACATAGACTATACCCTATTCGATCACCGATCGCCTGCTGAAACAGGCA
CGGAGCTAATGCGTCCGTATCTGCACGAGTTTCTGACTTCCGCCTACGAG
GACTACGACATTGTCATCTGGTCCGCCACCAGCATGCGCTGGATCGAGGA
AAAGATGCGCCTGCTGGGCGTGGCCAGTAACGATAACTACAAGGTGATGT
TCTATCTGGACTCCACCGCCATGATATCAGTTCATGTGCCGGAGCGCGGT
GTGGTGGACGTAAAGCCGCTTGGTGTAATCTGGGCCCTGTACAAGCAATA
CAACTCGAGCAACACTATCATGTTTGATGACATCCGTCGCAACTTCCTTA
TGAACCCAAAGTCCGGCCTAAAGATCCGCCCATTCCGTCAGGCTCATCTC
AACCGTGGCACGGACACCGAGCTGCTCAAGTTGTCCGACTATTTGCGCAA
AATCGCTCACCACTGCCCGGATTTCAATTCGCTAAACCATCGCAAGTGGG
AGCACTACCATCCCAAGAAGAACTCCGCAAGCTTTCTAGACCAT
BO05674.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:47:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ublcp1-RA | 963 | CG6697-PA | 1..960 | 17..976 | 4800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:47:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ublcp1-RA | 1202 | CG6697-RA | 168..1127 | 17..976 | 4800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:47:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23061875..23062676 | 175..976 | 4010 | 100 | Plus |
3R | 32079331 | 3R | 23061660..23061820 | 17..177 | 805 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:47:35 has no hits.
BO05674.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:29:58 Download gff for
BO05674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6697-RA | 1..963 | 17..979 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:56:28 Download gff for
BO05674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6697-RA | 158..1132 | 9..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:35 Download gff for
BO05674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ublcp1-RA | 168..1127 | 17..978 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:29:58 Download gff for
BO05674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6697-RA | 158..1132 | 9..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:27:05 Download gff for
BO05674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ublcp1-RA | 168..1127 | 17..978 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:27:05 Download gff for
BO05674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23061660..23061819 | 17..176 | 100 | -> | Plus |
3R | 23061877..23062676 | 177..978 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:35 Download gff for
BO05674.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18887382..18887541 | 17..176 | 100 | -> | Plus |
arm_3R | 18887599..18888398 | 177..978 | 99 | | Plus |
BO05674.pep Sequence
Translation from 16 to 994
> BO05674.pep
MEVKEVVVIVKWSGKEYPVDLTDQDTVEVLRHEIFRKTQVRPERQKLLNL
KYKGKTAADNVKISALELKPNFKLMMVGSTEADIEDACSLPDNIGEVVDD
FDDADEREESVEHSAVYLAKVQRRVRDYKIKELAPPREGKKLLVLDIDYT
LFDHRSPAETGTELMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLL
GVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNT
IMFDDIRRNFLMNPKSGLKIRPFRQAHLNRGTDTELLKLSDYLRKIAHHC
PDFNSLNHRKWEHYHPKKNSASFLDH
BO05674.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:51:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ublcp1-PA | 320 | CG6697-PA | 1..320 | 1..320 | 1678 | 100 | Plus |