Clone Sequence Records
BO05687.3prime Sequence
820 bp (793 high quality bases) assembled on 2005-12-02
> BO05687.3prime
ATGGTCTAGAAAGCTTGCTTTGGTTTTGATTGAATTCGAGCGTTGCACAA
CTGCAGGCGCAACTGGTTGAGATTTGGCTGGGACTTTTAGGGATTCTTCT
CCCGCTTTTCCCGCTGAGCTGCCAATCTTGTAGACATCGTTCTTGAAGAC
GATCACCAGCACGGTGATGTTGTCCACGGAGCCACGTTTATACGACTCCA
TGGCAAGTGATTTGGCGCCAAAGTCCGGCTCTTTCAGATGCTCCAACGCA
AAAGTGCAGGCCTCCTCATTGCTGAACGTGTCCCACAGCCCATCGGATGC
CAGTATCAGAAAATGGGGTTTGTGATCGTTTAGTTCGAAGGTCAAAATGT
CCGGCGTAGCAATCACCAGATTCTTATCTTTAAGCGGATAGTCCCCTAGA
GCACGTGACGTGGCCAACACCCCGGCCACACGCCAAACGCCTCGGAAGGC
GATGAATCCGCCTGCATCGTGGATTCTCTTTCGTTCTCGCACTTGCTGCG
GCTTGTGATCGAATGAAAGCGGTATGGCGATTCCACGCCAGTCGTACATG
ACTCCGCGGGAGTCGCCCACATTGGCCACAATCAGCTTTGAGCCCTGAAC
TATCGCTATTAGAGCGGTGGTTCCCGCAATGTTGGTCGCTCTCTTGGCCT
GCTCCACAAGCTTGTAGTCGGCCGACATGATCTCGTCCGTGATCAGTTTA
CCAAAGTTAATACGTCCGTGTTCGATGTAGCACTTGGCTTCGTAGTTTGG
AGGTGGCGCATTGGCTGCTCCGTTCTGTCCGTTGTTGTTGTTGTTGAGGA
AGGAATCCTTGGCGGCTCCC
BO05687.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:26:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7115-PA | 1575 | CG7115-RA | 771..1572 | 820..19 | 4010 | 100 | Minus |
| CG7115-PB | 1575 | CG7115-RB | 771..1572 | 820..19 | 4010 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:58:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7115-RE | 2612 | CG7115-RE | 1341..2142 | 820..19 | 4010 | 100 | Minus |
| CG7115-RD | 2001 | CG7115-RD | 730..1531 | 820..19 | 4010 | 100 | Minus |
| CG7115-RC | 1995 | CG7115-RC | 724..1525 | 820..19 | 4010 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:57:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7824580..7824880 | 319..19 | 1505 | 100 | Minus |
| 2L | 23513712 | 2L | 7824087..7824351 | 637..373 | 1325 | 100 | Minus |
| 2L | 23513712 | 2L | 7823845..7824028 | 820..637 | 920 | 100 | Minus |
| 2L | 23513712 | 2L | 7824426..7824480 | 374..320 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 15:58:00 has no hits.
BO05687.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:28:44 Download gff for
BO05687.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7115-PB | 771..1575 | 16..820 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:53:09 Download gff for
BO05687.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7115-PB | 771..1575 | 16..820 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:36:50 Download gff for
BO05687.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7115-RC | 724..1529 | 15..820 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:35:46 Download gff for
BO05687.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7115-RC | 724..1529 | 15..820 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:35:46 Download gff for
BO05687.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7823845..7824028 | 637..820 | 100 | -> | Minus |
| 2L | 7824088..7824351 | 373..636 | 100 | -> | Minus |
| 2L | 7824428..7824480 | 320..372 | 100 | -> | Minus |
| 2L | 7824580..7824884 | 15..319 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:36:50 Download gff for
BO05687.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7823845..7824028 | 637..820 | 100 | -> | Minus |
| arm_2L | 7824088..7824351 | 373..636 | 100 | -> | Minus |
| arm_2L | 7824428..7824480 | 320..372 | 100 | -> | Minus |
| arm_2L | 7824580..7824884 | 15..319 | 99 | | Minus |
BO05687.5prime Sequence
914 bp (826 high quality bases) assembled on 2005-11-29
> BO05687.5prime
GAAGTTATCAGTCGACATGGACGACGAACTGGAAGACAAGGTGTTCTATC
AGACATACGTATCGCACATGAAAATCCTGTCCAAATTTGCGGTGGGCTTC
TCGTCCATCAACTCCCCGCTGGCCTACATATGGAAGCTGTGCCGACTGTA
TGTCCTTCGGCCGGAGGTCATCTTCTGCGGCTTGATCCTCTTCGTCCTGT
TGCTCTATTTGCAAGCGGTAGATGTGTGGAGTCGCAGCATCCTGGGACGC
ATCCAGGCAACCCTCGGTCGCCAGAAGGCCGTCAAGATGATGGAGCTGTC
GGCCAGTGCTGGTGATCACCAGAGCTGGGAGGAGATGAAGCAGCAGAGCT
CGGCCTTCGCGGTCCTGGGACGCAGGCCAAGAATGGAGGATAGGTTTATT
ATCGAGGAGAACATCAACAACAACACTGGTATCTCCTTCTTTGCCGTATT
TGACGGTCATGGCGGCGAGTTTGCCGCAGACTTCGCCAAGGATGTGCTGG
TGAAGAACATCTACAATAAGATCATCGAGATGTCCAAGCTTCTGAAGACG
GAAGGAAATTCCGGAGATTACGATAAGAGTCCCTATTTAGCGCGCAAGCA
GAGTCGCAAGGATGCAAACAAGGAGAACACAGAACCGACGGCAGGGGTGA
TGCGAAAGGATAGTCTAAGGAAGGCCCACAGCACCACGGCGGATTGTAGT
GCTATTAAGCAAAAGACAACCGAGGCATCCATTGCCGACATCTACACAGT
CCAATTAAACTCGGCGATGAGAGCCAGTGGGAATTTGGGAGCCGCCAAGG
ATTCCTTCCTCACAACAACAACAACGGACAGAACGGAGCAGCCAATGCGC
CACCTCCAAACTACGAAGCCAAGTGCTACATCGAACACGGACGTATTAAC
TTTGGTAAACTGAT
BO05687.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:26:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7115-PA | 1575 | CG7115-RA | 1..796 | 17..812 | 3980 | 100 | Plus |
| CG7115-PB | 1575 | CG7115-RB | 1..796 | 17..812 | 3980 | 100 | Plus |
| CG7115-PA | 1575 | CG7115-RA | 797..899 | 812..914 | 515 | 100 | Plus |
| CG7115-PB | 1575 | CG7115-RB | 797..899 | 812..914 | 515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:56:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7115-RE | 2612 | CG7115-RE | 570..1469 | 16..914 | 4475 | 99.9 | Plus |
| CG7115-RB | 2238 | CG7115-RB | 196..1095 | 16..914 | 4475 | 99.9 | Plus |
| CG7115-RA | 2646 | CG7115-RA | 604..1503 | 16..914 | 4475 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:56:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7823449..7823973 | 391..914 | 2575 | 99.8 | Plus |
| 2L | 23513712 | 2L | 7822723..7823103 | 16..396 | 1905 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:56:04 has no hits.
BO05687.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:28:45 Download gff for
BO05687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7115-PB | 1..899 | 17..914 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:53:10 Download gff for
BO05687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7115-PB | 1..899 | 17..914 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 05:54:49 Download gff for
BO05687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7115-RA | 601..1503 | 12..914 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:14:49 Download gff for
BO05687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7115-RA | 601..1503 | 12..914 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:14:49 Download gff for
BO05687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7822720..7823100 | 12..393 | 99 | -> | Plus |
| 2L | 7823452..7823973 | 394..914 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 05:54:49 Download gff for
BO05687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7822720..7823100 | 12..393 | 99 | -> | Plus |
| arm_2L | 7823452..7823973 | 394..914 | 99 | | Plus |
BO05687.complete Sequence
1606 bp (1606 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ630141
> BO05687.complete
GAAGTTATCAGTCGACATGGACGACGAACTGGAAGACAAGGTGTTCTATC
AGACATACGTATCGCACATGAAAATCCTGTCCAAATTTGCGGTGGGCTTC
TCGTCCATCAACTCCCCGCTGGCCTACATATGGAAGCTGTGCCGACTGTA
TGTCCTTCGGCCGGAGGTCATCTTCTGCGGCTTGATCCTCTTCGTCCTGT
TGCTCTATTTGCAAGCGGTAGATGTGTGGAGTCGCAGCATCCTGGGACGC
ATCCAGGCAACCCTCGGTCGCCAGAAGGCCGTCAAGATGATGGAGCTGTC
GGCCAGTGCTGGTGATCACCAGAGCTGGGAGGAGATGAAGCAGCAGAGCT
CGGCCTTCGCGGTCCTGGGACGCAGGCCAAGAATGGAGGATAGGTTTATT
ATCGAGGAGAACATCAACAACAACACTGGTATCTCCTTCTTTGCCGTATT
TGACGGTCATGGCGGCGAGTTTGCCGCAGACTTCGCCAAGGATGTGCTGG
TGAAGAACATCTACAATAAGATCATCGAGATGTCCAAGCTTCTGAAGACG
GAAGGAAATTCCGGAGATTACGATAAGAGTCCCTATTTAGCGCGCAAGCA
GAGTCGCAAGGATGCAAACAAGGAGAACACAGAACCGACGGCAGGGGTGA
TGCGAAAGGATAGTCTAAGGAAGGCCCACAGCACCACGGCGGATTGTAGT
GCTATTAAGCAAAAGACAACCGAGGCATCCATTGCCGACATCTACACAGT
CCAATTAAACTCGGCGATGAGAGCCAGTGGGAATTTGGGAGCCGCCAAGG
ATTCCTTCCTCAACAACAACAACAACGGACAGAACGGAGCAGCCAATGCG
CCACCTCCAAACTACGAAGCCAAGTGCTACATCGAACACGGACGTATTAA
CTTTGGTAAACTGATCACGGACGAGATCATGTCGGCCGACTACAAGCTTG
TGGAGCAGGCCAAGAGAGCGACCAACATTGCGGGAACCACCGCTCTAATA
GCGATAGTTCAGGGCTCAAAGCTGATTGTGGCCAATGTGGGCGACTCCCG
CGGAGTCATGTACGACTGGCGTGGAATCGCCATACCGCTTTCATTCGATC
ACAAGCCGCAGCAAGTGCGAGAACGAAAGAGAATCCACGATGCAGGCGGA
TTCATCGCCTTCCGAGGCGTTTGGCGTGTGGCCGGGGTGTTGGCCACGTC
ACGTGCTCTAGGGGACTATCCGCTTAAAGATAAGAATCTGGTGATTGCTA
CGCCGGACATTTTGACCTTCGAACTAAACGATCACAAACCCCATTTTCTG
ATACTGGCATCCGATGGGCTGTGGGACACGTTCAGCAATGAGGAGGCCTG
CACTTTTGCGTTGGAGCATCTGAAAGAGCCGGACTTTGGCGCCAAATCAC
TTGCCATGGAGTCGTATAAACGTGGCTCCGTGGACAACATCACCGTGCTG
GTGATCGTCTTCAAGAACGATGTCTACAAGATTGGCAGCTCAGCGGGAAA
AGCGGGAGAAGAATCCCTAAAAGTCCCAGCCAAATCTCAACCAGTTGCGC
CTGCAGTTGTGCAACGCTCGAATTCAATCAAAACCAAAGCAAGCTTTCTA
GACCAT
BO05687.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:51:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7115-RE | 1575 | CG7115-PE | 1..1572 | 17..1588 | 7860 | 100 | Plus |
| CG7115-RB | 1575 | CG7115-PB | 1..1572 | 17..1588 | 7860 | 100 | Plus |
| CG7115-RA | 1575 | CG7115-PA | 1..1572 | 17..1588 | 7860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:51:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7115-RE | 2612 | CG7115-RE | 570..2142 | 16..1588 | 7865 | 100 | Plus |
| CG7115-RB | 2238 | CG7115-RB | 196..1768 | 16..1588 | 7865 | 100 | Plus |
| CG7115-RA | 2646 | CG7115-RA | 604..2176 | 16..1588 | 7865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:51:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7823449..7824028 | 391..970 | 2900 | 100 | Plus |
| 2L | 23513712 | 2L | 7822723..7823103 | 16..396 | 1905 | 100 | Plus |
| 2L | 23513712 | 2L | 7824580..7824880 | 1288..1588 | 1505 | 100 | Plus |
| 2L | 23513712 | 2L | 7824087..7824351 | 970..1234 | 1325 | 100 | Plus |
| 2L | 23513712 | 2L | 7824426..7824480 | 1233..1287 | 275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:51:41 has no hits.
BO05687.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:29:48 Download gff for
BO05687.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7115-RB | 1..1575 | 17..1591 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:56:17 Download gff for
BO05687.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7115-RB | 194..1773 | 12..1592 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:26:53 Download gff for
BO05687.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7115-RA | 605..2176 | 17..1590 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:29:48 Download gff for
BO05687.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7115-RB | 194..1773 | 12..1592 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:57:31 Download gff for
BO05687.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7115-RA | 605..2176 | 17..1590 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:57:31 Download gff for
BO05687.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7822724..7823100 | 17..393 | 100 | -> | Plus |
| 2L | 7823452..7824028 | 394..970 | 100 | -> | Plus |
| 2L | 7824088..7824351 | 971..1234 | 100 | -> | Plus |
| 2L | 7824428..7824480 | 1235..1287 | 100 | -> | Plus |
| 2L | 7824580..7824880 | 1288..1590 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:26:53 Download gff for
BO05687.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7822724..7823100 | 17..393 | 100 | -> | Plus |
| arm_2L | 7823452..7824028 | 394..970 | 100 | -> | Plus |
| arm_2L | 7824088..7824351 | 971..1234 | 100 | -> | Plus |
| arm_2L | 7824428..7824480 | 1235..1287 | 100 | -> | Plus |
| arm_2L | 7824580..7824880 | 1288..1590 | 99 | | Plus |
BO05687.pep Sequence
Translation from 16 to 1606
> BO05687.pep
MDDELEDKVFYQTYVSHMKILSKFAVGFSSINSPLAYIWKLCRLYVLRPE
VIFCGLILFVLLLYLQAVDVWSRSILGRIQATLGRQKAVKMMELSASAGD
HQSWEEMKQQSSAFAVLGRRPRMEDRFIIEENINNNTGISFFAVFDGHGG
EFAADFAKDVLVKNIYNKIIEMSKLLKTEGNSGDYDKSPYLARKQSRKDA
NKENTEPTAGVMRKDSLRKAHSTTADCSAIKQKTTEASIADIYTVQLNSA
MRASGNLGAAKDSFLNNNNNGQNGAANAPPPNYEAKCYIEHGRINFGKLI
TDEIMSADYKLVEQAKRATNIAGTTALIAIVQGSKLIVANVGDSRGVMYD
WRGIAIPLSFDHKPQQVRERKRIHDAGGFIAFRGVWRVAGVLATSRALGD
YPLKDKNLVIATPDILTFELNDHKPHFLILASDGLWDTFSNEEACTFALE
HLKEPDFGAKSLAMESYKRGSVDNITVLVIVFKNDVYKIGSSAGKAGEES
LKVPAKSQPVAPAVVQRSNSIKTKASFLDH
BO05687.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:52:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7115-PE | 524 | CG7115-PE | 1..524 | 1..524 | 2684 | 100 | Plus |
| CG7115-PB | 524 | CG7115-PB | 1..524 | 1..524 | 2684 | 100 | Plus |
| CG7115-PA | 524 | CG7115-PA | 1..524 | 1..524 | 2684 | 100 | Plus |
| CG7115-PD | 471 | CG7115-PD | 14..471 | 67..524 | 2342 | 100 | Plus |
| CG7115-PC | 469 | CG7115-PC | 12..469 | 67..524 | 2335 | 99.6 | Plus |
