Clone BO05752 Report

Search the DGRC for BO05752

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:57
Well:52
Vector:pDNR-Dual
Associated Gene/TranscriptCG7028-RA
Protein status:BO05752.pep: Imported from assembly
Sequenced Size:2755

Clone Sequence Records

BO05752.3prime Sequence

853 bp (795 high quality bases) assembled on 2005-12-02

> BO05752.3prime
ATGGTCTAGAAAGCTTGCCATCTTCTCCTGTATGAATGGATGAACTAGTG
CCTGGTTAAGGGAGATCCGTTTAGCCGGATCTAAGGCAAACATGTTCTCT
AGAAGATCCTTGAGCTGGGTGACCTTGCGATGTTGATCGTCGGGTAAGTT
CTGGTCAGCAATTAGTTCCTGCTGCAGGCTACGCGAAGGTTTGACTACAG
GCATTACAACAATTTTTTCCCTCTCAGTGAGCTTATCTATTTCATGGTAG
AGAAAGTTGCAGCTTTGGTCAAAATGCTGCTCTCTAAACTGACCTTTTCT
GATAATTCGGTTTGGTATCTTGCCTTTTACGTCCATGAAAAACTTAAGCA
TCTGATTGTTACTTTTCCCGCTAAACAGAATCTTTCCCGTGTATAACTCA
TAAATTGTGCAGCCCGCAGACCAGGTGTCGATTCCGTAGTCATAGGGAAT
ACCCAAAATTATCTCAGGCGAACGGTAGAACCGCGATACCAAGTACGGTG
TTATTTCGTTGTCGCTGATTGCCGAAGCAGAACCAAAATCACACAATTTT
AGTATCAGATTATTTTCGTTTACCAAAATGTTATCCGGCTTAATGTCAGC
ATGCAAAATGCCCGTCTTTTTTAACAATTTGAGCGCTAAGAATAGCTGCT
GCGTGTAGCTACGCACTGCTTTGATGTGGAGTCCCACATTCTTGCCATAC
TTTTTAAGTACTTCCCGCAAATTCATTGCTAATGGCTCAAACACCATACA
AAGATGCTGCTTGTGAAAGAAGTGACGATACAGTCGCAGGCAGTGGAAAC
GATCCTCTGGATCGGCATCGTTCAGCTTTTTTAATATTTCTAGTTCCCGC
AAG

BO05752.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:27:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG7028-PA 2724 CG7028-RA 1887..2721 853..19 4175 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:35:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG7028-RB 3112 CG7028-RB 2048..2882 853..19 4175 100 Minus
CG7028-RE 2990 CG7028-RE 2036..2870 853..19 4175 100 Minus
CG7028-RD 3097 CG7028-RD 2033..2867 853..19 4175 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:35:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 208371..208910 219..758 2700 100 Plus
3L 28110227 3L 208117..208318 19..220 1010 100 Plus
3L 28110227 3L 208971..209067 757..853 485 100 Plus
Blast to na_te.dros performed 2015-02-13 00:35:12
Subject Length Description Subject Range Query Range Score Percent Strand
Doc2-element 4789 Doc2-element DOC2 4789bp 2776..2831 129..184 109 66.1 Plus

BO05752.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:30:30 Download gff for BO05752.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7028-PA 1887..2724 15..853 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:55:38 Download gff for BO05752.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7028-PA 1887..2724 15..853 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:26:25 Download gff for BO05752.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7028-RA 2036..2873 15..853 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:42:01 Download gff for BO05752.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7028-RD 2033..2870 15..853 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:42:01 Download gff for BO05752.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 208113..208317 15..219 99 <- Plus
3L 208372..208908 220..756 100 <- Plus
3L 208971..209067 757..853 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:26:25 Download gff for BO05752.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 208113..208317 15..219 99 <- Plus
arm_3L 208372..208908 220..756 100 <- Plus
arm_3L 208971..209067 757..853 100   Plus

BO05752.5prime Sequence

850 bp (777 high quality bases) assembled on 2005-12-02

> BO05752.5prime
GAAGTTATCAGTCGACATGGCTGACGACAAAAGCTACGACTCCAGCAACA
ACAGCGAGACCGAAGAGCGTCGGGCCAAGCACAAAAAGGCTAAAAAGCAC
AAAAAACATAAAAAATCCTCGACTGGCAAGACCGAGAAGGACAGGCATGT
CCACAAGAAGCAGAAGAAGGCAAAAAAGCGCCCCCACCGAACAAGCGAAT
CCACAAACGAATCGGACGCCCCGGAAAACGCAAAGTTAAAGCTATCACAA
AATTGCGGGCTGAGCAGCAAGTTCACAGAAATCATGCAGAAGGCCAGCCG
GAATGGAGCCGATTTCCGTGTCGGCAAACCCCTGCTTCCGACGGATCCGA
GCAGCCTTGTTGAAGAAATCACCAAAACTATTCAGAATAAGATGCTGCCT
GTCCTGGAGGTGGCCAGTTCAAGCAGCGAAAGCGATGTGCCCGCCGATGC
CGCCAGTCCTATTATTTTGTCTATTATTGAAGACGAGCTTAATTTGGAGG
AATTGATGCGGCAGAAGGCCCTTCTGCAGGCGCGCCTGGGCGCCTATATG
TCGGATCCCGAGGCTGAGGATAAGGGCGATCTCCTCCCACACACACACTC
GCAGCAGCTGGTTGTCCACACCAAATCAGTGCTCAAAGCTGTCACATCCG
TACCGCAGCCCCAACCCAGCAAGTCTGCAGCGCCGTTGGCTACTGCAACC
AGTAAACATGCTAATATTAAAAAGTCTACCACGCATAACTCANATGAATC
CGATGTTATATTGTTGGATGATTCTAGCGGAGGCCAGCGAACCCCCTCGC
CTACACCCGAGAAACGAAGGCGCCACGCATCCCCGCTCCCCAGCGGCTCC

BO05752.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:27:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG7028-PA 2724 CG7028-RA 1..824 17..840 4101 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:55:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG7028-RB 3112 CG7028-RB 150..982 17..850 4134 99.8 Plus
CG7028-RE 2990 CG7028-RE 150..982 17..850 4134 99.8 Plus
CG7028-RD 3097 CG7028-RD 150..982 17..850 4134 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:55:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 210814..211221 439..32 2040 100 Minus
3L 28110227 3L 210337..210738 840..439 1999 99.8 Minus
Blast to na_te.dros performed on 2015-02-13 05:55:58 has no hits.

BO05752.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:30:32 Download gff for BO05752.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7028-PA 1..833 17..850 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:55:40 Download gff for BO05752.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7028-PA 1..833 17..850 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:57:39 Download gff for BO05752.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7028-RA 150..982 17..850 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:59:14 Download gff for BO05752.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7028-RD 150..982 17..850 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:59:14 Download gff for BO05752.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 210815..211219 34..438 100 <- Minus
3L 211292..211308 17..33 100   Minus
3L 210328..210738 439..850 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:57:39 Download gff for BO05752.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 210328..210738 439..850 99 <- Minus
arm_3L 210815..211219 34..438 100 <- Minus
arm_3L 211292..211308 17..33 100   Minus

BO05752.complete Sequence

2755 bp assembled on 2010-02-24

GenBank Submission: KX797842

> BO05752.complete
GAAGTTATCAGTCGACATGGCTGACGACAAAAGCTACGACTCCAGCAACA
ACAGCGAGACCGAAGAGCGTCGGGCCAAGCACAAAAAGGCTAAAAAGCAC
AAAAAACATAAAAAATCCTCGACTGGCAAGACCGAGAAGGACAGGCATGT
CCACAAGAAGCAGAAGAAGGCAAAAAAGCGCCCCCACCGAACAAGCGAAT
CCACAAACGAATCGGACGCCCCGGAAAACGCAAAGTTAAAGCTATCACAA
AATTGCGGGCTGAGCAGCAAGTTCACAGAAATCATGCAGAAGGCCAGCCG
GAATGGAGCCGATTTCCGTGTCGGCAAACCCCTGCTTCCGACGGATCCGA
GCAGCCTTGTTGAAGAAATCACCAAAACTATTCAGAATAAGATGCTGCCT
GTCCTGGAGGTGGCCAGTTCAAGCAGCGAAAGCGATGTGCCCGCCGATGC
CGCCAGTCCTATTATTTTGTCTATTATTGAAGACGAGCTTAATTTGGAGG
AATTGATGCGGCAGAAGGCCCTTCTGCAGGCGCGCCTGGGCGCCTATATG
TCGGATCCCGAGGCTGAGGATAAGGGCGATCTCCTCCCACACACACACTC
GCAGCAGCTGGTTGTCCACACCAAATCAGTGCTCAAAGCTGTCACATCCG
TACCGCAGCCCCAACCCAGCAAGTCTGCAGCGCCGTTGGCTACTGCAACC
AGTAAACATGCTAATATTAAAAAGTCTACCACGCATAACTCAAATGAATC
CGATGTTATATTGTTGGATGATTCTAGCGGAGGCCAGCGAACCCCCTCGC
CTACACCCGAGAAACGAAGGCGCCACGCATCCCCGCTCCCAGCGGCTCCG
AGAAGCCGTTGCCGTAGGGATCGTCGTTCGAGGGATCGCGACCGTTCACC
CCCACGTCGGCGAGCATCAGATCAGCAGACCCAGGTTCGCCCGCGGAGCC
GCAACCGCAACATGGAGGACCTACGACAGGAAATAAATCGCGACAAGCAA
AGGGAAAGACGGGACCATAGTCGAGACCGGGATCGGCGAGGATTGGATAG
GCCGCCGCCACCCACTGATATGAGACCAGGTCGTGCACGGGAGCGAGACG
TTCGGCCGAGTCGTATGCAGCGGTCGCACAGCCGCAGTAAGTTTGAATCA
GACAGGCGACGAGAGCGGGAGCGGCAAAAGGACCGGGATCGTGGTGGCGG
GCGCGTAGGAGCTCGCAGCGGGACAGACAACGGGGATAGAGATCGGTACA
AGGGTTCGCTGAGCGAGGGGCAAAATAAGCTCGACAAGGAGAGCAGTGAT
GAGGAGGTGAACGTAAACATTGACATTTTGGAGGAAGATGACGAAGAACG
TATCATTGAGCTACGTAGAAAGAAGCGCGAGGAGCTACTCAAGAAGCTGG
GCACTGGGCAAGAATCGCCAGCGCCTCATAACTCGGTCTCGTACGAGTCT
CGGAGTACCTCACAAGGGTCATCCCAACGCGAAAGACCTTTAAGAACGCC
GTCGCCCACGATGCCGTGCCCGAATCCACTTATCTCGGAAATTCCAAAGG
ATCGCGAAGATATGGATAACTCGACTAGCCAAAAGACTTGCTCCGCGAAG
GAAAAACGAAACGAGTGGGATATGTTCGCTGACCAAGACGTGGACTCTAA
TTTCGATTCACCCAACACAATCGTCCAAAATAAGCATCAACACGAAAATC
CCGCTCTCACAGACAATTGGGACGACGCTGAAGGTTATTACCGAGTTCGT
ATCGGTGAAGTTTTGGACAATCGCTACCTAGTGAATGGATACACAGGCCA
GGGTGTCTTCAGCAACGTAGTGCGTGGCAGAGACCAAGCTCGTGGGCAAG
CTAATGTAGCCATTAAGATCATACGGAACAACGAAATAATGCACAAAACT
GGCTTGCGGGAACTAGAAATATTAAAAAAGCTGAACGATGCCGATCCAGA
GGATCGTTTCCACTGCCTGCGACTGTATCGTCACTTCTTTCACAAGCAGC
ATCTTTGTATGGTGTTTGAGCCATTAGCAATGAATTTGCGGGAAGTACTT
AAAAAGTATGGCAAGAATGTGGGACTCCACATCAAAGCAGTGCGTAGCTA
CACGCAGCAGCTATTCTTAGCGCTCAAATTGTTAAAAAAGACGGGCATTT
TGCATGCTGACATTAAGCCGGATAACATTTTGGTAAACGAAAATAATCTG
ATACTAAAATTGTGTGATTTTGGTTCTGCTTCGGCAATCAGCGACAACGA
AATAACACCGTACTTGGTATCGCGGTTCTACCGTTCGCCTGAGATAATTT
TGGGTATTCCCTATGACTACGGAATCGACACCTGGTCTGCGGGCTGCACA
ATTTATGAGTTATACACGGGAAAGATTCTGTTTAGCGGGAAAAGTAACAA
TCAGATGCTTAAGTTTTTCATGGACGTAAAAGGCAAGATACCAAACCGAA
TTATCAGAAAAGGTCAGTTTAGAGAGCAGCATTTTGACCAAAGCTGCAAC
TTTCTCTACCATGAAATAGATAAGCTCACTGAGAGGGAAAAAATTGTTGT
AATGCCTGTAGTCAAACCTTCGCGTAGCCTGCAGCAGGAACTAATTGCTG
ACCAGAACTTACCCGACGATCAACATCGCAAGGTCACCCAGCTCAAGGAT
CTTCTAGAGAACATGTTTGCCTTAGATCCGGCTAAACGGATCTCCCTTAA
CCAGGCACTAGTTCATCCATTCATACAGGAGAAGATGGCAAGCTTTCTAG
ACCAT

BO05752.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:28:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG7028-RE 2724 CG7028-PE 1..2721 17..2737 13605 100 Plus
CG7028-RA 2724 CG7028-PA 1..2721 17..2737 13605 100 Plus
CG7028-RD 2721 CG7028-PD 1..2718 17..2737 13525 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:28:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG7028-RE 2990 CG7028-RE 150..2870 17..2737 13605 100 Plus
CG7028-RA 3100 CG7028-RA 150..2870 17..2737 13605 100 Plus
CG7028-RD 3097 CG7028-RD 150..2867 17..2737 13525 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:28:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 209784..210738 1393..439 4775 100 Minus
3L 28110227 3L 208371..208910 2537..1998 2700 100 Minus
3L 28110227 3L 210814..211221 439..32 2040 100 Minus
3L 28110227 3L 209450..209715 1657..1392 1330 100 Minus
3L 28110227 3L 209141..209374 1891..1658 1170 100 Minus
3L 28110227 3L 208117..208318 2737..2536 1010 100 Minus
3L 28110227 3L 208971..209079 1999..1891 545 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:28:19 has no hits.

BO05752.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-24 09:36:42 Download gff for BO05752.complete
Subject Subject Range Query Range Percent Splice Strand
CG7028-RA 155..2875 17..2739 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:59 Download gff for BO05752.complete
Subject Subject Range Query Range Percent Splice Strand
CG7028-RA 150..2870 17..2739 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:37 Download gff for BO05752.complete
Subject Subject Range Query Range Percent Splice Strand
CG7028-RA 150..2870 17..2739 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:37 Download gff for BO05752.complete
Subject Subject Range Query Range Percent Splice Strand
3L 209450..209713 1394..1657 100 <- Minus
3L 208971..209079 1891..1999 100 <- Minus
3L 209142..209374 1658..1890 100 <- Minus
3L 208115..208317 2537..2739 99 <- Minus
3L 208372..208908 2000..2536 100 <- Minus
3L 209784..210738 439..1393 100 <- Minus
3L 210815..211219 34..438 100 <- Minus
3L 211292..211308 17..33 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:59 Download gff for BO05752.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 209450..209713 1394..1657 100 <- Minus
arm_3L 208115..208317 2537..2739 99 <- Minus
arm_3L 208372..208908 2000..2536 100 <- Minus
arm_3L 208971..209079 1891..1999 100 <- Minus
arm_3L 209142..209374 1658..1890 100 <- Minus
arm_3L 209784..210738 439..1393 100 <- Minus
arm_3L 210815..211219 34..438 100 <- Minus
arm_3L 211292..211308 17..33 100   Minus

BO05752.pep Sequence

Translation from 16 to 2755

> BO05752.pep
MADDKSYDSSNNSETEERRAKHKKAKKHKKHKKSSTGKTEKDRHVHKKQK
KAKKRPHRTSESTNESDAPENAKLKLSQNCGLSSKFTEIMQKASRNGADF
RVGKPLLPTDPSSLVEEITKTIQNKMLPVLEVASSSSESDVPADAASPII
LSIIEDELNLEELMRQKALLQARLGAYMSDPEAEDKGDLLPHTHSQQLVV
HTKSVLKAVTSVPQPQPSKSAAPLATATSKHANIKKSTTHNSNESDVILL
DDSSGGQRTPSPTPEKRRRHASPLPAAPRSRCRRDRRSRDRDRSPPRRRA
SDQQTQVRPRSRNRNMEDLRQEINRDKQRERRDHSRDRDRRGLDRPPPPT
DMRPGRARERDVRPSRMQRSHSRSKFESDRRRERERQKDRDRGGGRVGAR
SGTDNGDRDRYKGSLSEGQNKLDKESSDEEVNVNIDILEEDDEERIIELR
RKKREELLKKLGTGQESPAPHNSVSYESRSTSQGSSQRERPLRTPSPTMP
CPNPLISEIPKDREDMDNSTSQKTCSAKEKRNEWDMFADQDVDSNFDSPN
TIVQNKHQHENPALTDNWDDAEGYYRVRIGEVLDNRYLVNGYTGQGVFSN
VVRGRDQARGQANVAIKIIRNNEIMHKTGLRELEILKKLNDADPEDRFHC
LRLYRHFFHKQHLCMVFEPLAMNLREVLKKYGKNVGLHIKAVRSYTQQLF
LALKLLKKTGILHADIKPDNILVNENNLILKLCDFGSASAISDNEITPYL
VSRFYRSPEIILGIPYDYGIDTWSAGCTIYELYTGKILFSGKSNNQMLKF
FMDVKGKIPNRIIRKGQFREQHFDQSCNFLYHEIDKLTEREKIVVMPVVK
PSRSLQQELIADQNLPDDQHRKVTQLKDLLENMFALDPAKRISLNQALVH
PFIQEKMASFLDH

BO05752.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG7028-PE 907 CG7028-PE 1..907 1..907 4704 100 Plus
CG7028-PA 907 CG7028-PA 1..907 1..907 4704 100 Plus
CG7028-PC 912 CG7028-PC 1..912 1..907 4688 99.5 Plus
CG7028-PD 906 CG7028-PD 1..906 1..907 4687 99.9 Plus
CG7028-PB 911 CG7028-PB 1..911 1..907 4671 99.3 Plus