Clone BO05808 Report

Search the DGRC for BO05808

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:58
Well:8
Vector:pDNR-Dual
Associated Gene/TranscriptCG7601-RA
Protein status:BO05808.pep: validated full length
Sequenced Size:1012

Clone Sequence Records

BO05808.3prime Sequence

865 bp (776 high quality bases) assembled on 2005-12-02

> BO05808.3prime
ATGGTCTAGAAAGCTTGCAGTGGACTTTTTCTCAGCATTCTCCAGTTTGA
CGGCGCGCTTGGCCATGATCCAAAAGTAGAGACTCGGGCAAAGATGACGA
AGATAGTAGGCGATCTTGGCCTGGACATCGCTGACAATAATGTCCGGTTC
TTTGCGAAGAATGCACTGCAGAATGCGTTCTGCAAGTTTATCCGGTGACA
TGCCCTTGGCCGTGGTTTCATCCACTTTGCCGTAACTGCTTCCCGATCCT
GTCAATGCATTCAAGGACAGCTGGGTGCGTATGTAGCCAGGACTCACGCA
GGACACGTTTATGTTCTTATTTGCCACCTCGGCTCGCAGGGAATCGGCAA
AAGCCTGCATGGCATGTTTCGAGGCGGAATAGGCAGCCCTTTGGGGAATG
GCAAACTTTCCCTGAACAGAGCTAATGAAGCATATGTGACCACTACCACG
TTTCACCATCGAAGGAAGTAGAGCTTTGGTCAGGGCAACGCTGCCAAAGT
AGTTAACCACCATCACCTTGAGATCCACATCCACTGCCGTGGATGCCACA
TCGGCTCGCACACTGATCCCTCCGTTGTTGATGAGTATGTCCACTTGGTT
GTACACGGCCAGCACCCGGGTGACAAATTCTGGAATGGAGTTCAGTTCAG
CCAGATCCAGGGGAAGCACTGTCGGCGGATAAGCGGGATCCACATCCAAT
GCGAGGAGGTCCTTCTTAACCCGCTCCAATTCCTGAGTGCGACGTGCCGC
CAAAATAACCCTGCATCCAGCGCGGTAGAAGACGTGGGCCAGAGATTCGC
CCAGGCCCGAACTGGCCCCCGTGATGAGCACCACCTGCCGGGCATTGATT
GCGGAAATTTCTGGC

BO05808.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:28:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG7601-PA 981 CG7601-RA 161..978 836..19 4090 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:01:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG7601-RA 1250 CG7601-RA 226..1072 864..19 4165 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:01:27
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29735714..29735961 228..475 1240 100 Plus
3R 32079331 3R 29736016..29736233 474..691 1090 100 Plus
3R 32079331 3R 29735447..29735655 19..227 1045 100 Plus
3R 32079331 3R 29736289..29736437 690..838 745 100 Plus
Blast to na_te.dros performed on 2015-02-11 22:01:28 has no hits.

BO05808.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:31:53 Download gff for BO05808.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7601-PA 130..981 16..865 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:57:31 Download gff for BO05808.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7601-PA 130..981 16..865 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:39:51 Download gff for BO05808.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7601-RA 224..1079 11..865 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:48:59 Download gff for BO05808.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7601-RA 224..1079 11..865 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:48:59 Download gff for BO05808.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 29735440..29735655 11..227 98 <- Plus
3R 29735714..29735959 228..473 100 <- Plus
3R 29736016..29736232 474..690 100 <- Plus
3R 29736290..29736433 691..834 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:39:51 Download gff for BO05808.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25561162..25561377 11..227 98 <- Plus
arm_3R 25561436..25561681 228..473 100 <- Plus
arm_3R 25561738..25561954 474..690 100 <- Plus
arm_3R 25562012..25562155 691..834 100 <- Plus

BO05808.5prime Sequence

804 bp (768 high quality bases) assembled on 2005-11-29

> BO05808.5prime
GAAGTTATCAGTCGACATGAAGGTGCAGGACATGGACAAATGTGCTCCCA
GCAGCGACTGGAACGTTCTTTACTGGGTGCTGGGCACGGTCCTGATGCCG
GTGGCACTTCCACTGGCCATCATCAACATTTGGCAGCGATTCCAGGCCCA
GAAATTCCGCAATCAATTGCCCGGCAAGGTGGTGCTCATCACGGGGGCCA
GTTCGGGCCTGGGCGAATCTCTGGCCCACGTCTTCTACCGCGCTGGATGC
AGGGTTATTTTGGCGGCACGTCGCACTCAGGAATTGGAGCGGGTTAAGAA
GGACCTCCTCGCATTGGATGTGGATCCCGCTTATCCGCCGACAGTGCTTC
CCCTGGATCTGGCTGAACTGAACTCCATTCCAGAATTTGTCACCCGGGTG
CTGGCCGTGTACAACCAAGTGGACATACTCATCAACAACGGAGGGATCAG
TGTGCGAGCCGATGTGGCATCCACGGCAGTGGATGTGGATCTCAAGGTGA
TGGTGGTTAACTACTTTGGCAGCGTTGCCCTGACCAAAGCTCTACTTCCT
TCGATGGTGAAACGTGGTAGTGGTCACATATGCTTCATTAGCTCTGTTCA
GGGAAAGTTTGCCATTCCCCAAAGGGCTGCCTATTCCGCCTCGAAACATG
CCATGCAGGCTTTTGCCGATTCCCTGCGAGCCGAGGTGGCAAATAAGAAC
ATAAACGTGTCCTGCGTGAGTCCTGGCTACATACGCACCCAGCTGTCCTT
GAATGCATTGACAGGATCGGGGAGCAGTTACGGCAAAGTGGATGAAACCA
CGGC

BO05808.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:28:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG7601-PA 981 CG7601-RA 1..788 17..804 3915 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:37:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG7601-RA 1250 CG7601-RA 95..882 17..804 3925 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:37:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29735714..29735961 785..538 1225 99.6 Minus
3R 32079331 3R 29736016..29736233 539..322 1090 100 Minus
3R 32079331 3R 29736487..29736651 181..17 825 100 Minus
3R 32079331 3R 29736289..29736435 323..177 735 100 Minus
Blast to na_te.dros performed on 2015-02-13 00:37:41 has no hits.

BO05808.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:31:54 Download gff for BO05808.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7601-PA 1..788 17..804 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:57:32 Download gff for BO05808.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7601-PA 1..788 17..804 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:26:36 Download gff for BO05808.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7601-RA 95..882 17..804 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:42:27 Download gff for BO05808.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7601-RA 95..882 17..804 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:42:27 Download gff for BO05808.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 29735637..29735655 786..804 100 <- Minus
3R 29735714..29735959 540..785 99 <- Minus
3R 29736016..29736232 323..539 100 <- Minus
3R 29736290..29736433 179..322 100 <- Minus
3R 29736490..29736645 23..178 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:26:36 Download gff for BO05808.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25561359..25561377 786..804 100 <- Minus
arm_3R 25561436..25561681 540..785 99 <- Minus
arm_3R 25561738..25561954 323..539 100 <- Minus
arm_3R 25562012..25562155 179..322 100 <- Minus
arm_3R 25562212..25562367 23..178 100 <- Minus

BO05808.complete Sequence

1012 bp (1012 high quality bases) assembled on 2005-10-19

GenBank Submission: FJ630150

> BO05808.complete
GAAGTTATCAGTCGACATGAAGGTGCAGGACATGGACAAATGTGCTCCCA
GCAGCGACTGGAACGTTCTTTACTGGGTGCTGGGCACGGTCCTGATGCCG
GTGGCACTTCCACTGGCCATCATCAACATTTGGCAGCGATTCCAGGCCCA
GAAATTCCGCAATCAATTGCCCGGCAAGGTGGTGCTCATCACGGGGGCCA
GTTCGGGCCTGGGCGAATCTCTGGCCCACGTCTTCTACCGCGCTGGATGC
AGGGTTATTTTGGCGGCACGTCGCACTCAGGAATTGGAGCGGGTTAAGAA
GGACCTCCTCGCATTGGATGTGGATCCCGCTTATCCGCCGACAGTGCTTC
CCCTGGATCTGGCTGAACTGAACTCCATTCCAGAATTTGTCACCCGGGTG
CTGGCCGTGTACAACCAAGTGGACATACTCATCAACAACGGAGGGATCAG
TGTGCGAGCCGATGTGGCATCCACGGCAGTGGATGTGGATCTCAAGGTGA
TGGTGGTTAACTACTTTGGCAGCGTTGCCCTGACCAAAGCTCTACTTCCT
TCGATGGTGAAACGTGGTAGTGGTCACATATGCTTCATTAGCTCTGTTCA
GGGAAAGTTTGCCATTCCCCAAAGGGCTGCCTATTCCGCCTCGAAACATG
CCATGCAGGCTTTTGCCGATTCCCTGCGAGCCGAGGTGGCAAATAAGAAC
ATAAACGTGTCCTGCGTGAGTCCTGGCTACATACGCACCCAGCTGTCCTT
GAATGCATTGACAGGATCGGGAAGCAGTTACGGCAAAGTGGATGAAACCA
CGGCCAAGGGCATGTCACCGGATAAACTTGCAGAACGCATTCTGCAGTGC
ATTCTTCGCAAAGAACCGGACATTATTGTCAGCGATGTCCAGGCCAAGAT
CGCCTACTATCTTCGTCATCTTTGCCCGAGTCTCTACTTTTGGATCATGG
CCAAGCGCGCCGTCAAACTGGAGAATGCTGAGAAAAAGTCCACTGCAAGC
TTTCTAGACCAT

BO05808.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:05:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG7601-RA 981 CG7601-PA 1..978 17..994 4890 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:05:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG7601-RA 1250 CG7601-RA 95..1072 17..994 4890 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:05:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29735714..29735961 785..538 1240 100 Minus
3R 32079331 3R 29736016..29736233 539..322 1090 100 Minus
3R 32079331 3R 29735447..29735655 994..786 1045 100 Minus
3R 32079331 3R 29736487..29736651 181..17 825 100 Minus
3R 32079331 3R 29736289..29736435 323..177 735 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:05:25 has no hits.

BO05808.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:01:25 Download gff for BO05808.complete
Subject Subject Range Query Range Percent Splice Strand
CG7601-RA 1..981 17..997 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:33:41 Download gff for BO05808.complete
Subject Subject Range Query Range Percent Splice Strand
CG7601-RA 170..1154 17..1002 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:57 Download gff for BO05808.complete
Subject Subject Range Query Range Percent Splice Strand
CG7601-RA 95..1072 17..996 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:01:26 Download gff for BO05808.complete
Subject Subject Range Query Range Percent Splice Strand
CG7601-RA 170..1154 17..1002 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:10:13 Download gff for BO05808.complete
Subject Subject Range Query Range Percent Splice Strand
CG7601-RA 95..1072 17..996 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:10:13 Download gff for BO05808.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29736016..29736232 323..539 100 <- Minus
3R 29735714..29735959 540..785 100 <- Minus
3R 29736290..29736433 179..322 100 <- Minus
3R 29736490..29736651 17..178 100   Minus
3R 29735444..29735655 786..996 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:57 Download gff for BO05808.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25562012..25562155 179..322 100 <- Minus
arm_3R 25562212..25562373 17..178 100   Minus
arm_3R 25561166..25561377 786..996 99 <- Minus
arm_3R 25561436..25561681 540..785 100 <- Minus
arm_3R 25561738..25561954 323..539 100 <- Minus

BO05808.pep Sequence

Translation from 16 to 1012

> BO05808.pep
MKVQDMDKCAPSSDWNVLYWVLGTVLMPVALPLAIINIWQRFQAQKFRNQ
LPGKVVLITGASSGLGESLAHVFYRAGCRVILAARRTQELERVKKDLLAL
DVDPAYPPTVLPLDLAELNSIPEFVTRVLAVYNQVDILINNGGISVRADV
ASTAVDVDLKVMVVNYFGSVALTKALLPSMVKRGSGHICFISSVQGKFAI
PQRAAYSASKHAMQAFADSLRAEVANKNINVSCVSPGYIRTQLSLNALTG
SGSSYGKVDETTAKGMSPDKLAERILQCILRKEPDIIVSDVQAKIAYYLR
HLCPSLYFWIMAKRAVKLENAEKKSTASFLDH

BO05808.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:40:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG7601-PA 326 CG7601-PA 1..326 1..326 1648 100 Plus
CG31937-PA 321 CG31937-PA 12..256 17..263 302 33.1 Plus
CG3699-PA 251 CG3699-PA 3..189 51..246 233 30.1 Plus
CG31549-PB 257 CG31549-PB 7..216 54..275 233 28.8 Plus
CG31549-PA 257 CG31549-PA 7..216 54..275 233 28.8 Plus