Clone Sequence Records
BO05812.3prime Sequence
807 bp (707 high quality bases) assembled on 2005-12-02
> BO05812.3prime
ATGGTCTAGAAAGCTTGCGGGCCTGCATCTGTCGAGGAATCGAGGGTACA
GGCAGACCTCGCGGATGTGGTAGCGGTTGAGCAGCCAGCAGAGGAAGCGC
TCCAGTCCCAAACCATAGCCGCCATGTGGCATGGTTCCATAGACGCGCTG
GTCCGTGTACCAGTAGTAGGGCTGTGGATCAATGCCTTCGCGCTTATAGC
CCTTGAGCAGCTCCTCGCTGTCGTAGATCCTCATCGACCCGCCCACAATT
TCGCCCACATTTGGCAGCAGAACGTCCACGCTCTCGGTCAAACGCTGGTC
CTCCTTGCAGCGCTGCATGTAGAAGGACTTGATTTCCGCTGGGAAACGGC
ACAGCATAATGGGTTCGTTGATGGTATCGGTCATCTTGCGCTCAGGAGCC
TCGGGAATATCCTCGCCAAACTCATAGAAGGTGCCATCGTCCTTGGTCAC
GTTGTTCTCCTTCAGCCACTTGATGGCATCCTCGTAGTTCATGCGACGGA
ACGGCTTCTGAGGCGGTTTGAAGTCAGGGTTAAGCTCCTTGACCAAGTAA
CCCCATGGGGACTTCAGAACACGATCCACCACGTCACAGACCAGATCCTC
CAATCGATCAAGCAGATCATCGAAAGTTAGGAACGGACACTCGGCCTCCA
CGTGCGTGTATTCAGCCAAGTGACGCCGCGTACGACTCTGTTCCGCACGA
TAGCTCTGGGAAATGGTAAAGACGTCGCCCAATGCCGGCAGGCAGGTCTC
CAGATATAGCTGCGAGCTCTGGGTGAGGTAGGCCTCCTCGCCGAAGTACT
TAAGCTT
BO05812.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:28:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10687-PA | 1677 | Aats-asn-RA | 886..1674 | 807..19 | 3945 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:47:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-asn-RB | 2375 | CG10687-RB | 1010..1798 | 807..19 | 3945 | 100 | Minus |
| Aats-asn-RA | 1982 | CG10687-RA | 1010..1798 | 807..19 | 3945 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:47:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19130046..19130834 | 19..807 | 3945 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 02:47:19 has no hits.
BO05812.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:31:59 Download gff for
BO05812.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10687-PA | 886..1677 | 18..807 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:57:40 Download gff for
BO05812.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10687-PA | 886..1677 | 18..807 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:50:58 Download gff for
BO05812.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 1010..1803 | 13..807 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:41:19 Download gff for
BO05812.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 1010..1803 | 13..807 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:41:19 Download gff for
BO05812.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19130041..19130834 | 13..807 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:50:58 Download gff for
BO05812.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19130041..19130834 | 13..807 | 99 | | Plus |
BO05812.5prime Sequence
874 bp (739 high quality bases) assembled on 2005-12-02
> BO05812.5prime
GAAGTTATCAGTCGACATGCCCGCCGATCAGTTGGCTGAGTTAACCTTGG
GTGCAATCTTTACGTCGGAAAAGAAGGGTAGTGATGAGTCCGGCGATGGC
AGTGAGTCCAAGCCCTTCAAGACCATCCTGCAGGCGATGCGTCATGCGGG
CAAGGAACCCTTTCCCACGATTTACGTAGACACCAAGGATCCGAATGCAG
CGGAGCCCTACGAGCCGGCTGCCAAGTCCCAGCTGAAGAAAATTCAGAAA
CTGTTCGTCAGGGAGTCGCACAAGAATGCCGATAAGCTGCAACGGGAGGC
GGAGGATGCGGAGAAGCGCCAGCAGAATCTGGAGGATGCTCGAAAGGTGA
AGATCTCGGAGGATCCCAGTCTGCCGGTGGCCCGGAAAATTCGAATCTAC
GAGGGCACTGCCAACCGCGACTCGCGTGTCAAGGTCTACGGTTGGGTGCA
TCGTCTGCGTCGTCAGGGCAAGTCCCTGATCTTCATAACACTGCGCGACG
GCACCGGTTTCCTGCAGTGCGTGCTAAACGATCAGCTCTGCCAGACCTAC
GATGCGCTCACCCTGAGCACGGAAAGCTCTGTAGTCCTGTTCGGTACCCT
GAAACTAGTTCCAGAAGGAAAGACGGCGCCGGGAGGGCATGAACTGAACG
TGGACTACTGGGAGCTGATTGGTCTGGCTCCGCCCGGCGGTGCCGATGCC
ATTCTCAACGAGGAAGCACAACCGGACGTGCAGCTCGACAACGGGCATAT
CATGATTCGTGGAGAGAACACCTCGAAAGTGCTCAAGATGCGATCCGTTG
TGACGCAAGCATTCCGTGGCCACTACGAGGCGCGTGGCTATAACGAGGTG
ACGCCCCCGACTCTGGTACAGACC
BO05812.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:28:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10687-PA | 1677 | Aats-asn-RA | 1..858 | 17..874 | 4265 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:02:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-asn-RB | 2375 | CG10687-RB | 125..982 | 17..874 | 4275 | 99.9 | Plus |
| Aats-asn-RA | 1982 | CG10687-RA | 125..982 | 17..874 | 4275 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:02:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19130862..19131686 | 874..50 | 4110 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-12 16:02:44 has no hits.
BO05812.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:32:00 Download gff for
BO05812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10687-PA | 1..858 | 17..874 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:57:41 Download gff for
BO05812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10687-PA | 1..858 | 17..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:11:24 Download gff for
BO05812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 119..982 | 10..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:37:56 Download gff for
BO05812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 119..982 | 10..874 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:37:56 Download gff for
BO05812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19130862..19131685 | 51..874 | 99 | <- | Minus |
| 2L | 19131797..19131836 | 10..50 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:11:24 Download gff for
BO05812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19130862..19131685 | 51..874 | 99 | <- | Minus |
| arm_2L | 19131797..19131836 | 10..50 | 92 | | Minus |
BO05812.complete Sequence
1708 bp (1708 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ630152
> BO05812.complete
GAAGTTATCAGTCGACATGCCCGCCGATCAGTTGGCTGAGTTAACCTTGG
GTGCAATCTTTACGTCGGAAAAGAAGGGTAGTGATGAGTCCGGCGATGGC
AGTGAGTCCAAGCCCTTCAAGACCATCCTGCAGGCGATGCGTCATGCGGG
CAAGGAACCCTTTCCCACGATTTACGTAGACACCAAGGATCCGAATGCAG
CGGAGCCCTACGAGCCGGCTGCCAAGTCCCAGCTGAAGAAAATTCAGAAA
CTGTTCGTCAGGGAGTCGCACAAGAATGCCGATAAGCTGCAACGGGAGGC
GGAGGATGCGGAGAAGCGCCAGCAGAATCTGGAGGATGCTCGAAAGGTGA
AGATCTCGGAGGATCCCAGTCTGCCGGTGGCCCGGAAAATTCGAATCTAC
GAGGGCACTGCCAACCGCGACTCGCGTGTCAAGGTCTACGGTTGGGTGCA
TCGTCTGCGTCGTCAGGGCAAGTCCCTGATCTTCATAACACTGCGCGACG
GCACCGGTTTCCTGCAGTGCGTGCTAAACGATCAGCTCTGCCAGACCTAC
GATGCGCTCACCCTGAGCACGGAAAGCTCTGTAGTCCTGTTCGGTACCCT
GAAACTAGTTCCAGAAGGAAAGACGGCGCCGGGAGGGCATGAACTGAACG
TGGACTACTGGGAGCTGATTGGTCTGGCTCCGCCCGGCGGTGCCGATGCC
ATTCTCAACGAGGAAGCACAACCGGACGTGCAGCTCGACAACCGGCATAT
CATGATTCGTGGAGAGAACACCTCGAAAGTGCTCAAGATGCGATCCGTTG
TGACGCAAGCATTCCGTGGCCACTACGAGGCGCGTGGCTATAACGAGGTG
ACGCCCCCGACTCTGGTACAGACCCAGGTGGAAGGTGGCTCAACGCTCTT
CAAGCTTAAGTACTTCGGCGAGGAGGCCTACCTCACCCAGAGCTCGCAGC
TATATCTGGAGACCTGCCTGCCGGCATTGGGCGACGTCTTTACCATTTCC
CAGAGCTATCGTGCGGAACAGAGTCGTACGCGGCGTCACTTGGCTGAATA
CACGCACGTGGAGGCCGAGTGTCCGTTCCTAACTTTCGATGATCTGCTTG
ATCGATTGGAGGATCTGGTCTGTGACGTGGTGGATCGTGTTCTGAAGTCC
CCATGGGGTTACTTGGTCAAGGAGCTTAACCCTGACTTCAAACCGCCTCA
GAAGCCGTTCCGTCGCATGAACTACGAGGATGCCATCAAGTGGCTGAAGG
AGAACAACGTGACCAAGGACGATGGCACCTTCTATGAGTTTGGCGAGGAT
ATTCCCGAGGCTCCTGAGCGCAAGATGACCGATACCATCAACGAACCCAT
TATGCTGTGCCGTTTCCCAGCGGAAATCAAGTCCTTCTACATGCAGCGCT
GCAAGGAGGACCAGCGTTTGACCGAGAGCGTGGACGTTCTGCTGCCAAAT
GTGGGCGAAATTGTGGGCGGGTCGATGAGGATCTACGACAGCGAGGAGCT
GCTCAAGGGCTATAAGCGCGAAGGCATTGATCCACAGCCCTACTACTGGT
ACACGGACCAGCGCGTCTATGGAACCATGCCACATGGCGGCTATGGTTTG
GGACTGGAGCGCTTCCTCTGCTGGCTGCTCAACCGCTACCACATCCGCGA
GGTCTGCCTGTACCCTCGATTCCTCGACAGATGCAGGCCCGCAAGCTTTC
TAGACCAT
BO05812.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:21:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-asn-RB | 1677 | CG10687-PB | 1..1674 | 17..1690 | 8370 | 100 | Plus |
| Aats-asn-RA | 1677 | CG10687-PA | 1..1674 | 17..1690 | 8370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:21:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-asn-RB | 2375 | CG10687-RB | 125..1798 | 17..1690 | 8370 | 100 | Plus |
| Aats-asn-RA | 1982 | CG10687-RA | 125..1798 | 17..1690 | 8370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:21:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19130046..19131686 | 1690..50 | 8205 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:21:54 has no hits.
BO05812.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:03:37 Download gff for
BO05812.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 1..1677 | 17..1691 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:22:42 Download gff for
BO05812.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 117..1801 | 10..1696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:07:49 Download gff for
BO05812.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 125..1798 | 17..1692 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:03:37 Download gff for
BO05812.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 117..1801 | 10..1696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:19:52 Download gff for
BO05812.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 125..1798 | 17..1692 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:19:52 Download gff for
BO05812.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19131797..19131830 | 17..50 | 100 | | Minus |
| 2L | 19130044..19131685 | 51..1692 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:07:49 Download gff for
BO05812.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19130044..19131685 | 51..1692 | 99 | <- | Minus |
| arm_2L | 19131797..19131830 | 17..50 | 100 | | Minus |
BO05812.pep Sequence
Translation from 16 to 1708
> BO05812.pep
MPADQLAELTLGAIFTSEKKGSDESGDGSESKPFKTILQAMRHAGKEPFP
TIYVDTKDPNAAEPYEPAAKSQLKKIQKLFVRESHKNADKLQREAEDAEK
RQQNLEDARKVKISEDPSLPVARKIRIYEGTANRDSRVKVYGWVHRLRRQ
GKSLIFITLRDGTGFLQCVLNDQLCQTYDALTLSTESSVVLFGTLKLVPE
GKTAPGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHIMIRGE
NTSKVLKMRSVVTQAFRGHYEARGYNEVTPPTLVQTQVEGGSTLFKLKYF
GEEAYLTQSSQLYLETCLPALGDVFTISQSYRAEQSRTRRHLAEYTHVEA
ECPFLTFDDLLDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRR
MNYEDAIKWLKENNVTKDDGTFYEFGEDIPEAPERKMTDTINEPIMLCRF
PAEIKSFYMQRCKEDQRLTESVDVLLPNVGEIVGGSMRIYDSEELLKGYK
REGIDPQPYYWYTDQRVYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYP
RFLDRCRPASFLDH
BO05812.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-asn-PB | 558 | CG10687-PB | 1..558 | 1..558 | 2954 | 100 | Plus |
| Aats-asn-PA | 558 | CG10687-PA | 1..558 | 1..558 | 2954 | 100 | Plus |
| CG6796-PA | 460 | CG6796-PA | 29..459 | 140..557 | 373 | 25.9 | Plus |
| Aats-asp-PB | 531 | CG3821-PB | 15..531 | 84..558 | 349 | 25 | Plus |
| Aats-asp-PC | 531 | CG3821-PC | 15..531 | 84..558 | 349 | 25 | Plus |
