Clone BO05819 Report

Search the DGRC for BO05819

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:58
Well:19
Vector:pDNR-Dual
Associated Gene/TranscriptCG5009-RA
Protein status:BO05819.pep: validated full length
Sequenced Size:2041

Clone Sequence Records

BO05819.3prime Sequence

886 bp (827 high quality bases) assembled on 2005-12-02

> BO05819.3prime
ATGGTCTAGAAAGCTTGCGAGGTGAGCCTTCATGAATGGCTTCAAGTACT
TGTGGAATGCTCCGTTGACTGGCTCCTTGTTCAACGGGTTCTTCTTCGTA
GACTCGAAGATGTGTTCGTAAACATTTCCATCATAGGCACCCAATGCGGA
ATCTAGCACGCGATCGTGAAGATCAAAGCTGTCCACCAAGCTGACGGCAT
TCGGCCGGAATCGTTTTAAGCAGTTCTCCAGGCGAACCTCCAGTTTCGTG
ACATCTTGATCAGTGAGATCAATGAACCGCAAGAAGTCGCCAATGCGGTT
GAGGCAGGCGTCTACCAGATACAGCTCCAGCACCACCTTTAGGACTTCAG
CTAGTTCTGGGGACACCTCGCGCGACAAGGCCAAAAGCTCCGTATAGGCA
GTCTGCGCTAGGAAGGCGCGTCCATGAAGATCTGCAGCTGCTGTTAGGAA
GGTGCCACATAGATTAGCTGCCACCTCGGTACCATAACCTTGCTTGCGGC
GCAGTTCAATCTGCTCATAGGCAATTCGGGTTTTGTTGGCGGCAACGAAT
TGGAAAGCCTTGACAATAGACCTCAATGATCCGTCAAAGTTAACAAACTT
GGTTTGGTTTATTGCATCACTGATGTACGAAACCGTTGGCACCAGCTTCT
CTCCATTCAAGGCCTGCCCATAAACCTTCACCAAATAGCGAGCAGTCTGC
AGCAGCATCACTGTGTTCTCGCCCTCATAGGTGCAAACGGCCGTGGTCAT
GCCGTATATCGTGGGGGAGTTGGAGCAGTCCATGTAGCCATGTCCGCCAC
ATGACAGACGACACGTTTCCACGCCGGCGGCGGCATCGGCACTACAGATG
GGCTTAAAGCAGCAGGACAATGCATGCATTTCGGGC

BO05819.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:28:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG5009-PA 2010 CG5009-RA 1140..2007 886..19 4265 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:08:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG5009-RA 2506 CG5009-RA 1466..2333 886..19 4295 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:07:53
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17763314..17763664 886..536 1710 99.1 Minus
2R 25286936 2R 17764110..17764368 277..19 1295 100 Minus
2R 25286936 2R 17763899..17764051 429..277 765 100 Minus
2R 25286936 2R 17763730..17763835 535..430 530 100 Minus
Blast to na_te.dros performed on 2015-02-10 18:07:57 has no hits.

BO05819.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:32:09 Download gff for BO05819.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5009-PA 1140..2010 18..886 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:57:53 Download gff for BO05819.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5009-PA 1140..2010 18..886 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 05:55:50 Download gff for BO05819.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5009-RA 1466..2339 11..886 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:18:57 Download gff for BO05819.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5009-RA 1466..2339 11..886 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:18:57 Download gff for BO05819.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 17763314..17763664 536..886 99 -> Minus
2R 17763730..17763835 430..535 100 -> Minus
2R 17763899..17764051 277..429 100 -> Minus
2R 17764111..17764374 11..276 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 05:55:50 Download gff for BO05819.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13650819..13651169 536..886 99 -> Minus
arm_2R 13651235..13651340 430..535 100 -> Minus
arm_2R 13651404..13651556 277..429 100 -> Minus
arm_2R 13651616..13651879 11..276 98   Minus

BO05819.5prime Sequence

860 bp (750 high quality bases) assembled on 2005-12-02

> BO05819.5prime
GAAGTTATCAGTCGACATGCCAGCCAAACCAGTGAATCCCGATCTCCAGA
AGGAACGCAGCACGGCCACCTTCAATCCCCGGGAGTTCTCCGTTCTGTGG
GCCGGCGGCGAGGAGCGATTCAAGGAGAAGAAGGCCCTGGAGAAATTGTT
TTTGGAGGATCCAGCCCTTCAGGACGACTTGCCCATTTCCTATTTGTCAC
ACAAGGAGCTCTATGAGCACAGCTTGCGCAAAGCCTGCATCATAGGAGAG
AAGATCCGCAAGCTACGTGCTGATGGCGAGGATGGAGTGGATACTTACAA
TGCTCTGCTTGGTGGATCCTTGGGATCGGCTATTCTAAAGGAGGGCAATC
CGCTTGCGCTGCACTACGTGATGTTCGTGCCCACCATCATGGGCCAGGGA
ACGATGGATCAGCAGGTGGAATGGCTGAGCAAGGCCTGGGACTGTGAAAT
CATTGGCACCTATGCCCAAACGGAACTGGGACACGGAACCTTCCTGCGCG
GTCTGGAGACCAGGGCTGACTACGATGCCAGCACCCAGGAGTTTGTTATA
AACACTCCATCACTCAGTGCATACAAGTGGTGGCCCGGTGGATTGGGACA
CACTGCTAACCATGCGGTTGTGGTGGCACAACTCTACACCAAGGGCGAGT
TCCGTGGTCTGGCTCCTTTTATTGTCCAATTGAGGGATTCCGATACTCAC
CGTCCCATGCCCGGCATCGACATTGGAGATATTGGTACCAAGCTGGGCAT
GAAAGGTGTCAACAATGGCTATTTGGGACTGAAGAACGTACGGGTGCCTT
TAAACAACATGCTGATGAAGAACCAGCAAGTGCTGCCCGATGGCACATAT
GTGGCGCCGA

BO05819.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:28:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG5009-PA 2010 CG5009-RA 1..844 17..860 4195 99.8 Plus
CG9707-PA 2034 Acox57D-p-RA 460..512 455..507 165 92.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:38:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG5009-RA 2506 CG5009-RA 327..1170 17..860 4205 99.9 Plus
CG4586-RA 2240 CG4586-RA 554..691 455..592 255 79 Plus
Acox57D-p-RB 2235 CG9707-RB 516..568 455..507 205 92.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:38:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17762336..17762635 294..593 1470 99.3 Plus
2R 25286936 2R 17762693..17762959 594..860 1320 99.6 Plus
2R 25286936 2R 17762128..17762288 140..300 805 100 Plus
2R 25286936 2R 17761266..17761389 17..140 620 100 Plus
X 23542271 X 6970471..6970608 455..592 255 79 Plus
2R 25286936 2R 21387296..21387348 455..507 205 92.5 Plus
Blast to na_te.dros performed on 2015-02-13 00:38:14 has no hits.

BO05819.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:32:10 Download gff for BO05819.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5009-PA 1..843 17..859 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:57:55 Download gff for BO05819.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5009-PA 1..843 17..859 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:26:40 Download gff for BO05819.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5009-RA 319..1169 7..859 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:42:32 Download gff for BO05819.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5009-RA 319..1169 7..859 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:42:32 Download gff for BO05819.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17762693..17762958 594..859 99   Plus
2R 17761258..17761389 7..140 97 -> Plus
2R 17762129..17762288 141..300 100 -> Plus
2R 17762343..17762635 301..593 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:26:40 Download gff for BO05819.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13648763..13648894 7..140 97 -> Plus
arm_2R 13649634..13649793 141..300 100 -> Plus
arm_2R 13649848..13650140 301..593 100 -> Plus
arm_2R 13650198..13650463 594..859 99   Plus

BO05819.complete Sequence

2041 bp (2041 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ630155

> BO05819.complete
GAAGTTATCAGTCGACATGCCAGCCAAACCAGTGAATCCCGATCTCCAGA
AGGAACGCAGCACGGCCACCTTCAATCCCCGGGAGTTCTCCGTTCTGTGG
GCCGGCGGCGAGGAGCGATTCAAGGAGAAGAAGGCCCTGGAGAAATTGTT
TTTGGAGGATCCAGCCCTTCAGGACGACTTGCCCATTTCCTATTTGTCAC
ACAAGGAGCTCTATGAGCACAGCTTGCGCAAAGCCTGCATCATAGGAGAG
AAGATCCGCAAGCTACGTGCTGATGGCGAGGATGGAGTGGATACTTACAA
TGCTCTGCTTGGTGGATCCTTGGGATCGGCTATTCTAAAGGAGGGCAATC
CGCTTGCGCTGCACTACGTGATGTTCGTGCCCACCATCATGGGCCAGGGA
ACGATGGATCAGCAGGTGGAATGGCTGAGCAAGGCCTGGGACTGTGAAAT
CATTGGCACCTATGCCCAAACGGAACTGGGACACGGAACCTTCCTGCGCG
GTCTGGAGACCAGGGCTGACTACGATGCCAGCACCCAGGAGTTTGTTATA
AACACTCCATCACTCAGTGCATACAAGTGGTGGCCCGGTGGATTGGGACA
CACTGCTAACCATGCGGTTGTGGTGGCACAACTCTACACCAAGGGCGAGT
TCCGTGGTCTGGCTCCTTTTATTGTCCAATTGAGGGATTCCGATACTCAC
CGTCCCATGCCCGGCATCGACATTGGAGATATTGGTACCAAGCTGGGCAT
GAAGGGTGTCAACAATGGCTATTTGGGACTGAAGAACGTACGGGTGCCTT
TAAACAACATGCTGATGAAGAACCAGCAAGTGCTGCCCGATGGCACATAT
GTGGCGCCGAAGAATAGCGTGCTTACCTACGGAACTATGATGTTTGTGCG
TTGTGCTCTTATCCGTGATACCGCTCAGAGCCTGGCAAAGGCATCCACTA
TTGCCACTAGGTATTCAGCTGTTCGCCGACAGAGTCCCATTGATCCCAAT
CAACCGGAGCCCCAAATCATGGACCATACCACGCAGCAGTTGAAGTTGTT
CCCCCAGATAGCTAAAGCCATCGTTTTCAAAACGACGGGTGATGGCATCT
GGAATATGTACAACGTGATATCTGGTGAGATTGAGCAGGGTAACTTGGAT
CGCCTGCCCGAAATGCATGCATTGTCCTGCTGCCTTAAGGCCATCTGTAG
TGCCGATGCCGCCGCCGGCGTGGAAACGTGTCGTCTGTCATGTGGCGGAC
ATGGCTACATGGACTGCTCCAACTTCCCCACGATATACGGCATGACCACG
GCCGTTTGCACCTATGAGGGCGAGAACACAGTGATGCTGCTGCAGACTGC
TCGCTATTTGGTGAAGGTTTATGGGCAGGCCTTGAATGGAGAGAAGCTGG
TGCCAACGGTTTCGTACATCAGTGATGCAATAAACCAAACCAAGTTTGTT
AACTTTGACGGATCATTGAGGTCTATTGTCAAGGCTTTCCAATTCGTTGC
CGCCAACAAAACCCGAATTGCCTATGAGCAGATTGAACTGCGCCGCAAGC
AAGGTTATGGTACCGAGGTGGCAGCTAATCTATGTGGCACCTTCCTAACA
GCAGCTGCAGATCTTCATGGACGCGCCTTCCTAGCGCAGACTGCCTATAC
GGAGCTTTTGGCCTTGTCGCGCGAGGTGTCCCCAGAACTAGCTGAAGTCC
TAAAGGTGGTGCTGGAGCTGTATCTGGTAGACGCCTGCCTCAACCGCATT
GGCGACTTCTTGCGGTTCATTGATCTCACTGATCAAGATGTCACGAAACT
GGAGGTTCGCCTGGAGAACTGCTTAAAACGATTCCGGCCGAATGCCGTCA
GCTTGGTGGACAGCTTTGATCTTCACGATCGCGTGCTAGATTCCGCATTG
GGTGCCTATGATGGAAATGTTTACGAACACATCTTCGAGTCTACGAAGAA
GAACCCGTTGAACAAGGAGCCAGTCAACGGAGCATTCCACAAGTACTTGA
AGCCATTCATGAAGGCTCACCTCGCAAGCTTTCTAGACCAT

BO05819.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:18:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG5009-RA 2010 CG5009-PA 1..2007 17..2023 10020 100 Plus
CG4586-RA 2034 CG4586-PA 454..591 455..592 255 79 Plus
Acox57D-p-RB 2034 CG9707-PB 460..512 455..507 205 92.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:18:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG5009-RA 2506 CG5009-RA 327..2333 17..2023 10020 100 Plus
CG4586-RA 2240 CG4586-RA 554..691 455..592 255 79 Plus
Acox57D-p-RB 2235 CG9707-RB 516..568 455..507 205 92.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:18:42
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17763047..17763664 889..1506 3075 99.8 Plus
2R 25286936 2R 17762693..17762988 594..889 1480 100 Plus
2R 25286936 2R 17762336..17762635 294..593 1470 99.3 Plus
2R 25286936 2R 17764110..17764368 1765..2023 1295 100 Plus
2R 25286936 2R 17762128..17762288 140..300 805 100 Plus
2R 25286936 2R 17763899..17764051 1613..1765 765 100 Plus
2R 25286936 2R 17761266..17761389 17..140 620 100 Plus
2R 25286936 2R 17763730..17763835 1507..1612 530 100 Plus
X 23542271 X 6970471..6970608 455..592 255 79 Plus
2R 25286936 2R 21387296..21387348 455..507 205 92.5 Plus
Blast to na_te.dros performed on 2014-11-27 07:18:43 has no hits.

BO05819.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:03:39 Download gff for BO05819.complete
Subject Subject Range Query Range Percent Splice Strand
CG5009-RA 1..2010 17..2024 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:22:44 Download gff for BO05819.complete
Subject Subject Range Query Range Percent Splice Strand
CG5009-RA 326..2346 7..2031 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:11:39 Download gff for BO05819.complete
Subject Subject Range Query Range Percent Splice Strand
CG5009-RA 327..2333 17..2025 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:03:39 Download gff for BO05819.complete
Subject Subject Range Query Range Percent Splice Strand
CG5009-RA 326..2346 7..2031 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:08:02 Download gff for BO05819.complete
Subject Subject Range Query Range Percent Splice Strand
CG5009-RA 327..2333 17..2025 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:08:02 Download gff for BO05819.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17762343..17762635 301..593 100 -> Plus
2R 17762693..17762988 594..889 100 -> Plus
2R 17761266..17761389 17..140 100 -> Plus
2R 17762129..17762288 141..300 100 -> Plus
2R 17763048..17763664 890..1506 99 -> Plus
2R 17763730..17763835 1507..1612 100 -> Plus
2R 17763899..17764051 1613..1765 100 -> Plus
2R 17764111..17764368 1766..2025 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:11:39 Download gff for BO05819.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13651616..13651873 1766..2025 99   Plus
arm_2R 13648771..13648894 17..140 100 -> Plus
arm_2R 13649634..13649793 141..300 100 -> Plus
arm_2R 13649848..13650140 301..593 100 -> Plus
arm_2R 13650198..13650493 594..889 100 -> Plus
arm_2R 13650553..13651169 890..1506 99 -> Plus
arm_2R 13651235..13651340 1507..1612 100 -> Plus
arm_2R 13651404..13651556 1613..1765 100 -> Plus

BO05819.pep Sequence

Translation from 16 to 2041

> BO05819.pep
MPAKPVNPDLQKERSTATFNPREFSVLWAGGEERFKEKKALEKLFLEDPA
LQDDLPISYLSHKELYEHSLRKACIIGEKIRKLRADGEDGVDTYNALLGG
SLGSAILKEGNPLALHYVMFVPTIMGQGTMDQQVEWLSKAWDCEIIGTYA
QTELGHGTFLRGLETRADYDASTQEFVINTPSLSAYKWWPGGLGHTANHA
VVVAQLYTKGEFRGLAPFIVQLRDSDTHRPMPGIDIGDIGTKLGMKGVNN
GYLGLKNVRVPLNNMLMKNQQVLPDGTYVAPKNSVLTYGTMMFVRCALIR
DTAQSLAKASTIATRYSAVRRQSPIDPNQPEPQIMDHTTQQLKLFPQIAK
AIVFKTTGDGIWNMYNVISGEIEQGNLDRLPEMHALSCCLKAICSADAAA
GVETCRLSCGGHGYMDCSNFPTIYGMTTAVCTYEGENTVMLLQTARYLVK
VYGQALNGEKLVPTVSYISDAINQTKFVNFDGSLRSIVKAFQFVAANKTR
IAYEQIELRRKQGYGTEVAANLCGTFLTAAADLHGRAFLAQTAYTELLAL
SREVSPELAEVLKVVLELYLVDACLNRIGDFLRFIDLTDQDVTKLEVRLE
NCLKRFRPNAVSLVDSFDLHDRVLDSALGAYDGNVYEHIFESTKKNPLNK
EPVNGAFHKYLKPFMKAHLASFLDH

BO05819.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:06:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG5009-PA 669 CG5009-PA 1..669 1..669 3491 100 Plus
Acox57D-p-PB 677 CG9707-PB 12..677 6..669 1703 49.5 Plus
Acox57D-p-PA 677 CG9707-PA 12..677 6..669 1703 49.5 Plus
Acox57D-d-PA 677 CG9709-PA 12..677 6..669 1683 49.7 Plus
CG4586-PA 677 CG4586-PA 3..677 6..669 1588 45.1 Plus