Clone BO05821 Report

Search the DGRC for BO05821

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:58
Well:21
Vector:pDNR-Dual
Associated Gene/Transcriptcert-RA
Protein status:BO05821.pep: validated full length
Sequenced Size:1837

Clone Sequence Records

BO05821.3prime Sequence

943 bp (869 high quality bases) assembled on 2005-12-02

> BO05821.3prime
ATGGTCTAGAAAGCTTGCGAACATGATCGGCTTGTCCTTGCACTGATCTA
TTACGTATCCCGTAAAGCGCTTCAGAAACTTGGGATACTCGCGCTTGTAG
ACGGCTCTCAGAGCACTCGCTGGCGCCCAGCCTCCAGGATTAACAACAGA
GCAGTAGGTTATTTTGCAGGTTAGATCGTTGCGATTTAGGGGCTGTCCCT
TCACATAACCCTCGGGCAAATGAGTTTGGCAGGCCAGGATGACGGTCAGG
AAGATCCGTACGCATTTTCCATTCTTTGACTCCTGCTTGGCGTACTCCGT
CGAGTTGTTGCACACCACCCACATGTCCCGGGCGCCCGGCTCCAGATTGT
CTGTGATCTTGCGCATGTGCGACCAAAATTGCGCATCACGCTGGCTCGCC
GGCCATATCCGCTTATGGGTTTGCAGGAAAAGCAGGGTGTCCGCCGAGAT
TTTTTCCAGGATGGTGCAGTCCTCCAAAGTGGTCTCCCAGTCATTTCGGA
ACTCGGGCATGAAGAAGTAATGGCACATTTCCCTCGCCGTCACGCCCTGC
ACCGTATGATAGGCCTTCAAGGGATCCATGACCAGCCCGTTGACCTCCTC
CTCGCGTTTGTACATTTTGATCTCCCCCTCGTCGGCAAAGATTTGCCAGC
CGTTGCCGTCTTGGCCAACGCCCTCGCGTGCGTAATGCAGTTGCTCCTTG
CACACGCGATCGATCTCCGGCCACAGGGCATGGCTGGTGGCCTCCGCACC
CGTGCCGAACTCCTCGCGCGCCTCCTCGCCCTCGGCCACCGCCTCGTGTG
GAACGTTGACCAGTGTCTGGGAGATCTGGGACTGCAGCTTAAGCTTGAAG
CGCAGCTGCATGTCCTCCTCGATTTTGTCCAGGCCCGTTTCGACCGCATC
GAAGAACTCATCCTCGGGGCATGTGGAATGTGGACCCTCCTCG

BO05821.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:28:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG7207-PA 1806 CG7207-RA 879..1803 943..19 4575 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:38:40
Subject Length Description Subject Range Query Range Score Percent Strand
cert-RC 2394 CG7207-RC 909..1833 943..19 4595 99.8 Minus
cert-RA 2557 CG7207-RA 1072..1996 943..19 4595 99.8 Minus
cert-RB 1825 CG7207-RB 342..1264 941..19 4585 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:38:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8283276..8283614 144..482 1695 100 Plus
3L 28110227 3L 8283773..8284010 483..720 1175 99.6 Plus
3L 28110227 3L 8284069..8284295 715..941 1105 99.1 Plus
3L 28110227 3L 8283089..8283214 19..144 630 100 Plus
Blast to na_te.dros performed on 2015-02-13 00:38:37 has no hits.

BO05821.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:32:13 Download gff for BO05821.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7207-PA 879..1806 16..943 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:57:59 Download gff for BO05821.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7207-PA 879..1806 16..943 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:26:42 Download gff for BO05821.3prime
Subject Subject Range Query Range Percent Splice Strand
cert-RA 1121..2045 19..943 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:42:36 Download gff for BO05821.3prime
Subject Subject Range Query Range Percent Splice Strand
cert-RA 1072..1996 19..943 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:42:36 Download gff for BO05821.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 8283089..8283213 19..143 100 <- Plus
3L 8283276..8283614 144..482 100 <- Plus
3L 8283773..8284004 483..714 100 <- Plus
3L 8284069..8284296 715..943 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:26:42 Download gff for BO05821.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8276189..8276313 19..143 100 <- Plus
arm_3L 8276376..8276714 144..482 100 <- Plus
arm_3L 8276873..8277104 483..714 100 <- Plus
arm_3L 8277169..8277396 715..943 98   Plus

BO05821.5prime Sequence

886 bp (784 high quality bases) assembled on 2005-12-02

> BO05821.5prime
GAAGTTATCAGTCGACATGGACACGAACGCTGGGGAGTCGCTGGGAGCAT
CGCCGCCCTCGAGCAATGAGGCAGCGGCGGGATCACAGTCCCAGAGCGAT
GCCTCCGAGGAGGAGGAGTATCTGGACAACAGTATCGAACTGAGGGGCTA
TCTCAGCAAGTGGACGAACTACATCTATGGATGGCAGCCACGCTACATAG
TCCTGAAGGATGGTACACTCTCCTACTATAAATCCGAATCGGAGTCGGAT
TTCGGGTGCCGCGGAGCCATCAGCCTGACCAAGGCCACCATTAAGGCCCA
TGAGTCCGACGAGCTCCGATTCGATGTTGTGGTGAACAACTTAAATAACT
GGTGCCTGCGGGCAGAGACCAGCGAGGACCGCATGCACTGGGTGGATGTG
CTGCAGCTGTACAAGGCGGACTCCGGCAGCACGGACACCACTTCCTTGCG
CCGCCATGGCAGTACCATGAGCCTGCAATCGAACACTATCTCGCTGACCA
GCGGAGGAAGCCTAAAGAAGACGCAGCGCAACCTGCGCGAAAAAGTCGGC
GAGCTGGAGACCTTTAAGGATATACTATTTGGACAGATCGAGACTCTGCA
GCGATACTTTGATGCCTGCTCGGAGGTGAACAAAAACAATGCGCAACCAC
TGGACCTGGGCGACGGTCTGAAGTCCATCGATTTCAAGGGCGAATCCATC
ACGTTTCGGGCCACAACGTCTGGCGTGCTAACCACCCTGCAGCATTGCCT
AGAAATCATCGCCGAGAGCGATGAGTCATGGAAACGGAAACTGGAGCGTG
AAATAGATAAGCGTCGACGTTCTGAGGACCAAAGCAAAAAGCTCAAGGAT
GAAGTTGAGAAAATGAAGCGTCTATCGTATCCTGGC

BO05821.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:28:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG7207-PA 1806 CG7207-RA 1..870 17..886 4325 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:24:37
Subject Length Description Subject Range Query Range Score Percent Strand
cert-RC 2394 CG7207-RC 31..900 17..886 4335 99.9 Plus
cert-RA 2557 CG7207-RA 194..1063 17..886 4335 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:24:35
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8287827..8288222 689..294 1980 100 Minus
3L 28110227 3L 8289169..8289448 296..17 1400 100 Minus
3L 28110227 3L 8287609..8287759 837..687 740 99.3 Minus
3L 28110227 3L 8287326..8287378 886..834 250 98.1 Minus
Blast to na_te.dros performed on 2015-02-12 10:24:36 has no hits.

BO05821.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:32:14 Download gff for BO05821.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7207-PA 1..870 17..886 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:58:01 Download gff for BO05821.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7207-PA 1..870 17..886 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:57:04 Download gff for BO05821.5prime
Subject Subject Range Query Range Percent Splice Strand
cert-RA 238..1112 10..886 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:00:50 Download gff for BO05821.5prime
Subject Subject Range Query Range Percent Splice Strand
cert-RA 189..1063 10..886 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:00:50 Download gff for BO05821.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8289170..8289451 10..295 98   Minus
3L 8287609..8287757 689..837 99 <- Minus
3L 8287828..8288220 296..688 100 <- Minus
3L 8287326..8287374 838..886 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:57:04 Download gff for BO05821.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8280426..8280474 838..886 100 <- Minus
arm_3L 8280709..8280857 689..837 99 <- Minus
arm_3L 8280928..8281320 296..688 100 <- Minus
arm_3L 8282270..8282551 10..295 98   Minus

BO05821.complete Sequence

1837 bp (1837 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ638630

> BO05821.complete
GAAGTTATCAGTCGACATGGACACGAACGCTGGGGAGTCGCTGGGAGCAT
CGCCGCCCTCGAGCAATGAGGCAGCGGCGGGATCACAGTCCCAGAGCGAT
GCCTCCGAGGAGGAGGAGTATCTGGACAACAGTATCGAACTGAGGGGCTA
TCTCAGCAAGTGGACGAACTACATCTATGGATGGCAGCCACGCTACATAG
TCCTGAAGGATGGTACACTCTCCTACTATAAATCCGAATCGGAGTCGGAT
TTCGGGTGCCGCGGAGCCATCAGCCTGACCAAGGCCACCATTAAGGCCCA
TGAGTCCGACGAGCTCCGATTCGATGTTGTGGTGAACAACTTAAATAACT
GGTGCCTGCGGGCAGAGACCAGCGAGGACCGCATGCACTGGGTGGATGTG
CTGCAGCTGTACAAGGCGGACTCCGGCAGCACGGACACCACTTCCTTGCG
CCGCCATGGCAGTACCATGAGCCTGCAATCGAACACTATCTCGCTGACCA
GCGGAGGAAGCCTAAAGAAGACGCAGCGCAACCTGCGCGAAAAAGTCGGC
GAGCTGGAGACCTTTAAGGATATACTATTTGGACAGATCGAGACTCTGCA
GCGATACTTTGATGCCTGCTCGGAGGTGAACAAAAACAATGCGCAACCAC
TGGACCTGGGCGACGGTCTGAAGTCCATCGATTTCAAGGGCGAATCCATC
ACGTTTCGGGCCACAACGTCTGGCGTGCTAACCACCCTGCAGCATTGCCT
AGAAATCATCGCCGAGAGCGATGAGTCATGGAAACGGAAACTGGAGCGTG
AAATAGATAAGCGTCGACGTTCTGAGGACCAAAGCAAAAAGCTCAAGGAT
GAAGTTGAGAAAATGAAGCGTCTATCGTATCCTGGCCCAGATTTCGAGGA
GGGTCCACATTCCACATTGCCCGAGGATGAGTTCTTCGATGCGGTCGAAA
CGGGCCTGGACAAAATCGAGGAGGACATGCAGCTGCGCTTCAAGCTTAAG
CTGCAGTCCCAGATCTCCCAGACACTGGTCAACGTTCCACACGAGGCGGT
GGCCGAGGGCGAGGAGGCGCGCGAGGAGTTCGGCACGGGTGCGGAGGCCA
CCAGCCATGCCCTGTGGCCGGAGATCGATCGCGTGTGCAAGGAGCAACTG
CATTACGCACGCGAGGGCGTTGGCCAAGACGGCAACGGCTGGCAAATCTT
TGCCGACGAGGGGGAGATCAAAATGTACAAACGCGAGGAGGAGGTCAACG
GGCTGGTCATGGATCCCTTGAAGGCCTATCATACGGTGCAGGGCGTGACG
GCGAGGGAAATGTGCCATTACTTCTTCATGCCCGAGTTCCGAAATGACTG
GGAGACCACTTTGGAGGACTGCACCATCCTGGAAAAAATCTCGGCGGACA
CCCTGCTTTTCCTGCAAACCCATAAGCGGATATGGCCGGCGAGCCAGCGT
GATGCGCAATTTTGGTCGCACATGCGCAAGATCACAGACAATCTGGAGCC
GGGCGCCCGGGACATGTGGGTGGTGTGCAACAACTCGACGGAGTACGCCA
AGCAGGAGTCAAAGAATGGAAAATGCGTACGGATCTTCCTGACCGTCATC
CTGGCCTGCCAAACTCATTTGCCCGAGGGTTATGTGAAGGGACAGCCCCT
AAATCGCAACGATCTAACCTGCAAAATAACCTACTGCTCTGTTGTTAATC
CTGGAGGCTGGGCGCCAGCGAGTGCTCTGAGAGCCGTCTACAAGCGCGAG
TATCCCAAGTTTCTGAAGCGCTTTACGGGATACGTAATAGATCAGTGCAA
GGACAAGCCGATCATGTTCGCAAGCTTTCTAGACCAT

BO05821.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:20:05
Subject Length Description Subject Range Query Range Score Percent Strand
cert-RC 1806 CG7207-PC 1..1803 17..1819 9000 99.9 Plus
cert-RA 1806 CG7207-PA 1..1803 17..1819 9000 99.9 Plus
cert-RB 990 CG7207-PB 65..987 897..1819 4615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:20:06
Subject Length Description Subject Range Query Range Score Percent Strand
cert-RC 2394 CG7207-RC 31..1833 17..1819 9000 99.9 Plus
cert-RA 2557 CG7207-RA 194..1996 17..1819 9000 99.9 Plus
cert-RB 1825 CG7207-RB 342..1264 897..1819 4615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:20:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8287827..8288222 689..294 1980 100 Minus
3L 28110227 3L 8283276..8283614 1694..1356 1695 100 Minus
3L 28110227 3L 8289169..8289448 296..17 1400 100 Minus
3L 28110227 3L 8283773..8284010 1355..1118 1175 99.6 Minus
3L 28110227 3L 8284069..8284295 1123..897 1135 100 Minus
3L 28110227 3L 8287609..8287759 837..687 740 99.3 Minus
3L 28110227 3L 8283089..8283214 1819..1694 630 100 Minus
3L 28110227 3L 8287313..8287378 899..834 315 98.5 Minus
Blast to na_te.dros performed on 2014-11-27 14:20:04 has no hits.

BO05821.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:03:26 Download gff for BO05821.complete
Subject Subject Range Query Range Percent Splice Strand
CG7207-RA 1..1806 17..1822 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:22:32 Download gff for BO05821.complete
Subject Subject Range Query Range Percent Splice Strand
CG7207-RA 176..1983 10..1819 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:40:12 Download gff for BO05821.complete
Subject Subject Range Query Range Percent Splice Strand
cert-RA 243..2045 17..1821 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:03:26 Download gff for BO05821.complete
Subject Subject Range Query Range Percent Splice Strand
CG7207-RA 176..1983 10..1819 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:08:58 Download gff for BO05821.complete
Subject Subject Range Query Range Percent Splice Strand
cert-RA 194..1996 17..1821 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:08:58 Download gff for BO05821.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8289170..8289448 17..295 100   Minus
3L 8283086..8283213 1695..1821 98 <- Minus
3L 8283276..8283614 1356..1694 100 <- Minus
3L 8283773..8284004 1124..1355 100 <- Minus
3L 8284069..8284293 899..1123 100 <- Minus
3L 8287314..8287374 838..898 100 <- Minus
3L 8287609..8287757 689..837 99 <- Minus
3L 8287828..8288220 296..688 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:40:12 Download gff for BO05821.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8280414..8280474 838..898 100 <- Minus
arm_3L 8280709..8280857 689..837 99 <- Minus
arm_3L 8276186..8276313 1695..1821 98 <- Minus
arm_3L 8276376..8276714 1356..1694 100 <- Minus
arm_3L 8276873..8277104 1124..1355 100 <- Minus
arm_3L 8277169..8277393 899..1123 100 <- Minus
arm_3L 8280928..8281320 296..688 100 <- Minus
arm_3L 8282270..8282548 17..295 100   Minus

BO05821.pep Sequence

Translation from 16 to 1837

> BO05821.pep
MDTNAGESLGASPPSSNEAAAGSQSQSDASEEEEYLDNSIELRGYLSKWT
NYIYGWQPRYIVLKDGTLSYYKSESESDFGCRGAISLTKATIKAHESDEL
RFDVVVNNLNNWCLRAETSEDRMHWVDVLQLYKADSGSTDTTSLRRHGST
MSLQSNTISLTSGGSLKKTQRNLREKVGELETFKDILFGQIETLQRYFDA
CSEVNKNNAQPLDLGDGLKSIDFKGESITFRATTSGVLTTLQHCLEIIAE
SDESWKRKLEREIDKRRRSEDQSKKLKDEVEKMKRLSYPGPDFEEGPHST
LPEDEFFDAVETGLDKIEEDMQLRFKLKLQSQISQTLVNVPHEAVAEGEE
AREEFGTGAEATSHALWPEIDRVCKEQLHYAREGVGQDGNGWQIFADEGE
IKMYKREEEVNGLVMDPLKAYHTVQGVTAREMCHYFFMPEFRNDWETTLE
DCTILEKISADTLLFLQTHKRIWPASQRDAQFWSHMRKITDNLEPGARDM
WVVCNNSTEYAKQESKNGKCVRIFLTVILACQTHLPEGYVKGQPLNRNDL
TCKITYCSVVNPGGWAPASALRAVYKREYPKFLKRFTGYVIDQCKDKPIM
FASFLDH

BO05821.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:28:29
Subject Length Description Subject Range Query Range Score Percent Strand
cert-PC 601 CG7207-PC 1..601 1..601 3180 100 Plus
cert-PA 601 CG7207-PA 1..601 1..601 3180 100 Plus
cert-PB 329 CG7207-PB 22..329 294..601 1662 99.7 Plus
Osbp-PA 784 CG6708-PA 16..283 41..313 247 28.2 Plus