Clone BO05845 Report

Search the DGRC for BO05845

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:58
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG16857-RA
Protein status:BO05845.pep: Imported from assembly
Sequenced Size:2191

Clone Sequence Records

BO05845.3prime Sequence

899 bp (828 high quality bases) assembled on 2005-12-02

> BO05845.3prime
ATGGTCTAGAAAGCTTGCGGTGGACTGGCGTATCTTGATGCTGTCCCGAT
CCCGCTGATCCTGTTCGTCGCTGTCGCAGTCGCCGCTCTCGGCGGTGTCC
TCATCCTCGCTGGCGGAGCTATCCTTGGCGAACAGATGCCTTAGGCAGCT
CCGCTTCACGTATAAAAAAGCGCACAGGGCGCAGAGCAGGAAGATGACGC
CCACGGAACTGCCGATGATCAGGGCCCGCACTTTACGCTGCGATGGCACG
TCGATGAGGAGCTCGTGACTGGGCACCGATTGCTGGGTTTCGGTGCCCAC
CGCCAGGACCTGCACCTTGAACAGTGTGTCCTCCTTGAGGTGGCGCAGCT
GGTAGTAGTTGTCGAAGGTCTCTGCGTGGCCGATGAGGAAATGCTCCGGC
TCCTTCCACCAACGAACGGCGTACAGGCGCAGGCCTTCCAATCCCTGGAC
GGGATGCTCCCAGTGGAGGAGCCAGCCCTGCTGGTTGCTAATGGCAGTGA
GATTCCAGGGAGCTCCCAGTCCCCCGGCAGGCGCAGTGACCTGACCCAGA
TCGTGTTGCAGCTGCTGGGCATCAAAGTCATCCGCTCTAATGGGCGAGGG
TAGCGTTTGAAAGCGGAACTGCTTGCTGAACATGCCGTCTCCGTACTTGT
CCTGGCTGAGCACCATAAATTCGTACTCTTTTCCTGGCTGAAGGTGCTGC
ACCGTCGCCTCCATCACCTTTTTATCCAACACGCGAAGCGTTCGCCATTC
GGGTGCCTCCATGAGTCGATACCAAACAGTGTACTCCAAGTTGGGACGAA
GGTATCCTGGCTGCCAGCGTATGGTGATGCAGGTCTCCGTGCTGTTGGCC
GTGAGATTGTACGGCGCCCGCGGTGCGATGTTCTCAATCATGAGCTCGG

BO05845.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:29:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG16857-PA 2160 CG16857-RA 1277..2157 899..19 4405 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:47:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG16857-RA 2730 CG16857-RA 1631..2511 899..19 4405 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:47:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4331031..4331611 599..19 2905 100 Minus
2L 23513712 2L 4330754..4330962 808..600 1045 100 Minus
2L 23513712 2L 4330449..4330542 899..806 470 100 Minus
Blast to na_te.dros performed on 2015-02-12 06:47:53 has no hits.

BO05845.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:32:49 Download gff for BO05845.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16857-PA 1277..2160 16..899 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:58:51 Download gff for BO05845.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16857-PA 1277..2160 16..899 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:30:30 Download gff for BO05845.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16857-RA 1631..2519 11..899 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:27:30 Download gff for BO05845.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16857-RA 1631..2519 11..899 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:27:30 Download gff for BO05845.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 4330449..4330541 807..899 100 -> Minus
2L 4330756..4330962 600..806 100 -> Minus
2L 4331031..4331619 11..599 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:30:30 Download gff for BO05845.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4330449..4330541 807..899 100 -> Minus
arm_2L 4330756..4330962 600..806 100 -> Minus
arm_2L 4331031..4331619 11..599 99   Minus

BO05845.5prime Sequence

842 bp (821 high quality bases) assembled on 2005-12-02

> BO05845.5prime
GAAGTTATCAGTCGACATGCCAGCGAAACGCAGCAGAACATTCCGGCAAT
CCGGATCCGCGCTACTTGCTCTTCTGGCGATCATTCTCTTAATGAACATA
TCCTGTACGAGCGCTGCCCGCGATCACAGGCGGCAGACCAACCTGGAGGC
CAAGGTGGGCTCCCACGTGGTCTTCAACTGCTACATCGATTTCCCCTTCG
ATGCCCCCATTCCCTACTTGGTGCACTGGACAAAGGATAACAAGAAAATC
TTCACCTGGTACGAGCAGGAGACCTCCACCAGTGAGCTATTCAATGGCCG
ATTGCACCTGGTCGAGAACCATCCGGAATTTGGACGCGCCTCCGTGAATC
TGACCGCCATTCGGGAATCGGACCAGGGTTGGTACCACTGCCAAGTTAGC
TTTCCCAATCGCTCGCCCTCGGTTCGCAACAATGGCACGGCCTACCACCT
GGCCGTCCAGGGTGGCTCCCTCATCCGCATTCCGCCGGTGAATCAGACGA
TCCGGGAGGGACAGACCGCCTTCTTTCACTGCGTGATGAAGCATCCGGAG
AACTCGCAGGCCTCCTGGTACAAGGATGGCGTGCTGCTGCAAGAGGTCCA
GGATCTGGTGCGCAGATTCTACATGGGTCCCGATGGCAGCCTCAGCATCG
ATCCCACCATGATGAGCGACCTGNGCGAGTACGAGTGCAAGGTGCGCAAC
AGCGATGGCGAACTGCAGACGGCCAAGGCCTTTCTCAACATACAATATAA
GGCCAAGGTGATTTACGCCCCGCCGGAGGTTTTCCTGCCGTACGGCCAGC
CCGCCGTGCTCGATTGTCACTTCCGGGCGAATCCGCCGCTGA

BO05845.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:29:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG16857-PA 2160 CG16857-RA 1..826 17..842 4086 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:44:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG16857-RA 2730 CG16857-RA 350..1180 12..842 4114 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:44:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4328938..4329445 239..746 2529 99.8 Plus
2L 23513712 2L 4324903..4325129 12..238 1105 99.1 Plus
2L 23513712 2L 4329511..4329606 747..842 480 100 Plus
Blast to na_te.dros performed on 2015-02-13 15:44:05 has no hits.

BO05845.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:32:50 Download gff for BO05845.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16857-PA 1..825 17..841 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:58:52 Download gff for BO05845.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16857-PA 1..825 17..841 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:05:22 Download gff for BO05845.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16857-RA 348..1179 9..841 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:19:35 Download gff for BO05845.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16857-RA 348..1179 9..841 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:19:35 Download gff for BO05845.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 4324902..4325129 11..238 98 -> Plus
2L 4328938..4329445 239..746 99 -> Plus
2L 4329511..4329605 747..841 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:05:22 Download gff for BO05845.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4324902..4325129 11..238 98 -> Plus
arm_2L 4328938..4329445 239..746 99 -> Plus
arm_2L 4329511..4329605 747..841 100   Plus

BO05845.complete Sequence

2191 bp assembled on 2008-11-10

GenBank Submission: KX799296

> BO05845.complete
GAAGTTATCAGTCGACATGCCAGCGAAACGCAGCAGAACATTCCGGCAAT
CCGGATCCGCGCTACTTGCTCTTCTGGCGATCATTCTCTTAATGAACATA
TCCTGTACGAGCGCTGCCCGCGATCACAGGCGGCAGACCAACCTGGAGGC
CAAGGTGGGCTCCCACGTGGTCTTCAACTGCTACATCGATTTCCCCTTCG
ATGCCCCCATTCCCTACTTGGTGCACTGGACAAAGGATAACAAGAAAATC
TTCACCTGGTACGAGCAGGAGACCTCCACCAGTGAGCTATTCAATGGCCG
ATTGCACCTGGTCGAGAACCATCCGGAATTTGGACGCGCCTCCGTGAATC
TGACCGCCATTCGGGAATCGGACCAGGGTTGGTACCACTGCCAAGTTAGC
TTTCCCAATCGCTCGCCCTCGGTTCGCAACAATGGCACGGCCTACCACCT
GGCCGTCCAGGGTGGCTCCCTCATCCGCATTCCGCCGGTGAATCAGACGA
TCCGGGAGGGACAGACCGCCTTCTTTCACTGCGTGATGAAGCATCCGGAG
AACTCGCAGGCCTCCTGGTACAAGGATGGCGTGCTGCTGCAAGAGGTCCA
GGATCTGGTGCGCAGATTCTACATGGGTCCCGATGGCAGCCTCAGCATCG
ATCCCACCATGATGAGCGACCTGGGCGAGTACGAGTGCAAGGTGCGCAAC
AGCGATGGCGAACTGCAGACGGCCAAGGCCTTTCTCAACATACAATATAA
GGCCAAGGTGATTTACGCCCCGCCGGAGGTTTTCCTGCCGTACGGCCAGC
CCGCCGTGCTCGATTGTCACTTCCGGGCGAATCCGCCGCTGAAGAATTTG
CGCTGGGAGAAGGACGGCCTGCTCTTCGACTCGTACAATGTGCCCGGGGT
CTTCTACAAGATGAACGGCAGCCTGTTCTTCGCCAAAGTGGACGAGAACC
ATGCCGGCAGCTACACTTGCACGCCCTACAACGACCTCGGCACGGACGGA
CCATCGCCGGTCATCAGCGTGATTGTGCTCCGACCGCCCATCTTCAGCGT
CACGCCCAAGGCCATCTACATCCAGAAGCTGGGCGAGGCCGCCGAGCTGC
CCTGCGAAGCCATCGACCGCGACGGAAACAATCGGCCCTCCATTATCTGG
GGCAGGAAAGACGGGCAGCCGCTGCCGGCGGACAGGTTCAGTCTCAGCGG
CGGCAATCTGACTATCACGGGATTGGTGGAGGGGGACCGTGGAATATACG
AGTGCTCGGCGACCAACGAGGCGGCCACCATTACGGCGGAGGCCGAGCTC
ATGATTGAGAACATCGCACCGCGGGCGCCGTACAATCTCACGGCCAACAG
CACGGAGACCTGCATCACCATACGCTGGCAGCCAGGATACCTTCGTCCCA
ACTTGGAGTACACTGTTTGGTATCGACTCATGGAGGCACCCGAATGGCGA
ACGCTTCGCGTGTTGGATAAAAAGGTGATGGAGGCGACGGTGCAGCACCT
TCAGCCAGGAAAAGAGTACGAATTTATGGTGCTCAGCCAGGACAAGTACG
GAGACGGCATGTTCAGCAAGCAGTTCCGCTTTCAAACGCTACCCTCGCCC
ATTAGAGCGGATGACTTTGATGCCCAGCAGCTGCAACACGATCTGGGTCA
GGTCACTGCGCCTGCCGGGGGACTGGGAGCTCCCTGGAATCTCACTGCCA
TTAGCAACCAGCAGGGCTGGCTCCTCCACTGGGAGCATCCCGTCCAGGGA
TTGGAAGGCCTGCGCCTGTACGCCGTTCGTTGGTGGAAGGAGCCGGAGCA
TTTCCTCATCGGCCACGCAGAGACCTTCGACAACTACTACCAGCTGCGCC
ACCTCAAGGAGGACACACTGTTCAAGGTGCAGGTCCTGGCGGTGGGCACC
GAAACCCAGCAATCGGTGCCCAGTCACGAGCTCCTCATCGACGTGCCATC
GCAGCGTAAAGTGCGGGCCCTGATCATCGGCAGTTCCGTGGGCGTCATCT
TCCTGCTCTGCGCCCTGTGCGCTTTTTTATACGTGAAGCGGAGCTGCCTA
AGGCATCTGTTCGCCAAGGATAGCTCCGCCAGCGAGGATGAGGACACCGC
CGAGAGCGGCGACTGCGACAGCGACGAACAGGATCAGCGGGATCGGGACA
GCATCAAGATACGCCAGTCCACCGCAAGCTTTCTAGACCAT

BO05845.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:07:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG16857-RA 2160 CG16857-PA 1..2157 17..2173 10770 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:07:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG16857-RA 2730 CG16857-RA 350..2511 12..2173 10780 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:07:31
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4331031..4331611 1593..2173 2905 100 Plus
2L 23513712 2L 4328938..4329445 239..746 2540 100 Plus
2L 23513712 2L 4329511..4329920 747..1156 2050 100 Plus
2L 23513712 2L 4330312..4330542 1156..1386 1155 100 Plus
2L 23513712 2L 4324903..4325129 12..238 1105 99.1 Plus
2L 23513712 2L 4330754..4330962 1384..1592 1045 100 Plus
Blast to na_te.dros performed on 2014-11-26 22:07:32 has no hits.

BO05845.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:48:57 Download gff for BO05845.complete
Subject Subject Range Query Range Percent Splice Strand
CG16857-RA 329..2500 9..2181 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:47:38 Download gff for BO05845.complete
Subject Subject Range Query Range Percent Splice Strand
CG16857-RA 355..2511 17..2175 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:58:30 Download gff for BO05845.complete
Subject Subject Range Query Range Percent Splice Strand
CG16857-RA 336..2492 17..2175 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:51:59 Download gff for BO05845.complete
Subject Subject Range Query Range Percent Splice Strand
CG16857-RA 355..2511 17..2175 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:51:59 Download gff for BO05845.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4330756..4330962 1386..1592 100 -> Plus
2L 4330313..4330541 1157..1385 100 -> Plus
2L 4324908..4325129 17..238 99 -> Plus
2L 4328938..4329445 239..746 100 -> Plus
2L 4329511..4329920 747..1156 100 -> Plus
2L 4331031..4331611 1593..2175 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:47:38 Download gff for BO05845.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4330756..4330962 1386..1592 100 -> Plus
arm_2L 4330313..4330541 1157..1385 100 -> Plus
arm_2L 4324908..4325129 17..238 99 -> Plus
arm_2L 4328938..4329445 239..746 100 -> Plus
arm_2L 4329511..4329920 747..1156 100 -> Plus
arm_2L 4331031..4331611 1593..2175 99   Plus

BO05845.pep Sequence

Translation from 16 to 2191

> BO05845.pep
MPAKRSRTFRQSGSALLALLAIILLMNISCTSAARDHRRQTNLEAKVGSH
VVFNCYIDFPFDAPIPYLVHWTKDNKKIFTWYEQETSTSELFNGRLHLVE
NHPEFGRASVNLTAIRESDQGWYHCQVSFPNRSPSVRNNGTAYHLAVQGG
SLIRIPPVNQTIREGQTAFFHCVMKHPENSQASWYKDGVLLQEVQDLVRR
FYMGPDGSLSIDPTMMSDLGEYECKVRNSDGELQTAKAFLNIQYKAKVIY
APPEVFLPYGQPAVLDCHFRANPPLKNLRWEKDGLLFDSYNVPGVFYKMN
GSLFFAKVDENHAGSYTCTPYNDLGTDGPSPVISVIVLRPPIFSVTPKAI
YIQKLGEAAELPCEAIDRDGNNRPSIIWGRKDGQPLPADRFSLSGGNLTI
TGLVEGDRGIYECSATNEAATITAEAELMIENIAPRAPYNLTANSTETCI
TIRWQPGYLRPNLEYTVWYRLMEAPEWRTLRVLDKKVMEATVQHLQPGKE
YEFMVLSQDKYGDGMFSKQFRFQTLPSPIRADDFDAQQLQHDLGQVTAPA
GGLGAPWNLTAISNQQGWLLHWEHPVQGLEGLRLYAVRWWKEPEHFLIGH
AETFDNYYQLRHLKEDTLFKVQVLAVGTETQQSVPSHELLIDVPSQRKVR
ALIIGSSVGVIFLLCALCAFLYVKRSCLRHLFAKDSSASEDEDTAESGDC
DSDEQDQRDRDSIKIRQSTASFLDH

BO05845.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:28:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG16857-PA 719 CG16857-PA 1..719 1..719 3835 100 Plus
tutl-PE 902 CG15427-PE 267..882 47..677 893 32.1 Plus
tutl-PC 903 CG15427-PC 267..882 47..677 893 32.1 Plus
tutl-PI 963 CG15427-PI 267..882 47..677 893 32.1 Plus
tutl-PF 963 CG15427-PF 267..882 47..677 893 32.1 Plus
tutl-PE 902 CG15427-PE 115..524 16..424 370 28.8 Plus
tutl-PC 903 CG15427-PC 115..524 16..424 370 28.8 Plus
tutl-PI 963 CG15427-PI 115..524 16..424 370 28.8 Plus