Clone Sequence Records
BO05845.3prime Sequence
899 bp (828 high quality bases) assembled on 2005-12-02
> BO05845.3prime
ATGGTCTAGAAAGCTTGCGGTGGACTGGCGTATCTTGATGCTGTCCCGAT
CCCGCTGATCCTGTTCGTCGCTGTCGCAGTCGCCGCTCTCGGCGGTGTCC
TCATCCTCGCTGGCGGAGCTATCCTTGGCGAACAGATGCCTTAGGCAGCT
CCGCTTCACGTATAAAAAAGCGCACAGGGCGCAGAGCAGGAAGATGACGC
CCACGGAACTGCCGATGATCAGGGCCCGCACTTTACGCTGCGATGGCACG
TCGATGAGGAGCTCGTGACTGGGCACCGATTGCTGGGTTTCGGTGCCCAC
CGCCAGGACCTGCACCTTGAACAGTGTGTCCTCCTTGAGGTGGCGCAGCT
GGTAGTAGTTGTCGAAGGTCTCTGCGTGGCCGATGAGGAAATGCTCCGGC
TCCTTCCACCAACGAACGGCGTACAGGCGCAGGCCTTCCAATCCCTGGAC
GGGATGCTCCCAGTGGAGGAGCCAGCCCTGCTGGTTGCTAATGGCAGTGA
GATTCCAGGGAGCTCCCAGTCCCCCGGCAGGCGCAGTGACCTGACCCAGA
TCGTGTTGCAGCTGCTGGGCATCAAAGTCATCCGCTCTAATGGGCGAGGG
TAGCGTTTGAAAGCGGAACTGCTTGCTGAACATGCCGTCTCCGTACTTGT
CCTGGCTGAGCACCATAAATTCGTACTCTTTTCCTGGCTGAAGGTGCTGC
ACCGTCGCCTCCATCACCTTTTTATCCAACACGCGAAGCGTTCGCCATTC
GGGTGCCTCCATGAGTCGATACCAAACAGTGTACTCCAAGTTGGGACGAA
GGTATCCTGGCTGCCAGCGTATGGTGATGCAGGTCTCCGTGCTGTTGGCC
GTGAGATTGTACGGCGCCCGCGGTGCGATGTTCTCAATCATGAGCTCGG
BO05845.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:29:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16857-PA | 2160 | CG16857-RA | 1277..2157 | 899..19 | 4405 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:47:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16857-RA | 2730 | CG16857-RA | 1631..2511 | 899..19 | 4405 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:47:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 4331031..4331611 | 599..19 | 2905 | 100 | Minus |
2L | 23513712 | 2L | 4330754..4330962 | 808..600 | 1045 | 100 | Minus |
2L | 23513712 | 2L | 4330449..4330542 | 899..806 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 06:47:53 has no hits.
BO05845.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:32:49 Download gff for
BO05845.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16857-PA | 1277..2160 | 16..899 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:58:51 Download gff for
BO05845.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16857-PA | 1277..2160 | 16..899 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:30:30 Download gff for
BO05845.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16857-RA | 1631..2519 | 11..899 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:27:30 Download gff for
BO05845.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16857-RA | 1631..2519 | 11..899 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:27:30 Download gff for
BO05845.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4330449..4330541 | 807..899 | 100 | -> | Minus |
2L | 4330756..4330962 | 600..806 | 100 | -> | Minus |
2L | 4331031..4331619 | 11..599 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:30:30 Download gff for
BO05845.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 4330449..4330541 | 807..899 | 100 | -> | Minus |
arm_2L | 4330756..4330962 | 600..806 | 100 | -> | Minus |
arm_2L | 4331031..4331619 | 11..599 | 99 | | Minus |
BO05845.5prime Sequence
842 bp (821 high quality bases) assembled on 2005-12-02
> BO05845.5prime
GAAGTTATCAGTCGACATGCCAGCGAAACGCAGCAGAACATTCCGGCAAT
CCGGATCCGCGCTACTTGCTCTTCTGGCGATCATTCTCTTAATGAACATA
TCCTGTACGAGCGCTGCCCGCGATCACAGGCGGCAGACCAACCTGGAGGC
CAAGGTGGGCTCCCACGTGGTCTTCAACTGCTACATCGATTTCCCCTTCG
ATGCCCCCATTCCCTACTTGGTGCACTGGACAAAGGATAACAAGAAAATC
TTCACCTGGTACGAGCAGGAGACCTCCACCAGTGAGCTATTCAATGGCCG
ATTGCACCTGGTCGAGAACCATCCGGAATTTGGACGCGCCTCCGTGAATC
TGACCGCCATTCGGGAATCGGACCAGGGTTGGTACCACTGCCAAGTTAGC
TTTCCCAATCGCTCGCCCTCGGTTCGCAACAATGGCACGGCCTACCACCT
GGCCGTCCAGGGTGGCTCCCTCATCCGCATTCCGCCGGTGAATCAGACGA
TCCGGGAGGGACAGACCGCCTTCTTTCACTGCGTGATGAAGCATCCGGAG
AACTCGCAGGCCTCCTGGTACAAGGATGGCGTGCTGCTGCAAGAGGTCCA
GGATCTGGTGCGCAGATTCTACATGGGTCCCGATGGCAGCCTCAGCATCG
ATCCCACCATGATGAGCGACCTGNGCGAGTACGAGTGCAAGGTGCGCAAC
AGCGATGGCGAACTGCAGACGGCCAAGGCCTTTCTCAACATACAATATAA
GGCCAAGGTGATTTACGCCCCGCCGGAGGTTTTCCTGCCGTACGGCCAGC
CCGCCGTGCTCGATTGTCACTTCCGGGCGAATCCGCCGCTGA
BO05845.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:29:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16857-PA | 2160 | CG16857-RA | 1..826 | 17..842 | 4086 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:44:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16857-RA | 2730 | CG16857-RA | 350..1180 | 12..842 | 4114 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:44:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 4328938..4329445 | 239..746 | 2529 | 99.8 | Plus |
2L | 23513712 | 2L | 4324903..4325129 | 12..238 | 1105 | 99.1 | Plus |
2L | 23513712 | 2L | 4329511..4329606 | 747..842 | 480 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 15:44:05 has no hits.
BO05845.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:32:50 Download gff for
BO05845.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16857-PA | 1..825 | 17..841 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:58:52 Download gff for
BO05845.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16857-PA | 1..825 | 17..841 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:05:22 Download gff for
BO05845.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16857-RA | 348..1179 | 9..841 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:19:35 Download gff for
BO05845.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16857-RA | 348..1179 | 9..841 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:19:35 Download gff for
BO05845.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4324902..4325129 | 11..238 | 98 | -> | Plus |
2L | 4328938..4329445 | 239..746 | 99 | -> | Plus |
2L | 4329511..4329605 | 747..841 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:05:22 Download gff for
BO05845.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 4324902..4325129 | 11..238 | 98 | -> | Plus |
arm_2L | 4328938..4329445 | 239..746 | 99 | -> | Plus |
arm_2L | 4329511..4329605 | 747..841 | 100 | | Plus |
BO05845.complete Sequence
2191 bp assembled on 2008-11-10
GenBank Submission: KX799296
> BO05845.complete
GAAGTTATCAGTCGACATGCCAGCGAAACGCAGCAGAACATTCCGGCAAT
CCGGATCCGCGCTACTTGCTCTTCTGGCGATCATTCTCTTAATGAACATA
TCCTGTACGAGCGCTGCCCGCGATCACAGGCGGCAGACCAACCTGGAGGC
CAAGGTGGGCTCCCACGTGGTCTTCAACTGCTACATCGATTTCCCCTTCG
ATGCCCCCATTCCCTACTTGGTGCACTGGACAAAGGATAACAAGAAAATC
TTCACCTGGTACGAGCAGGAGACCTCCACCAGTGAGCTATTCAATGGCCG
ATTGCACCTGGTCGAGAACCATCCGGAATTTGGACGCGCCTCCGTGAATC
TGACCGCCATTCGGGAATCGGACCAGGGTTGGTACCACTGCCAAGTTAGC
TTTCCCAATCGCTCGCCCTCGGTTCGCAACAATGGCACGGCCTACCACCT
GGCCGTCCAGGGTGGCTCCCTCATCCGCATTCCGCCGGTGAATCAGACGA
TCCGGGAGGGACAGACCGCCTTCTTTCACTGCGTGATGAAGCATCCGGAG
AACTCGCAGGCCTCCTGGTACAAGGATGGCGTGCTGCTGCAAGAGGTCCA
GGATCTGGTGCGCAGATTCTACATGGGTCCCGATGGCAGCCTCAGCATCG
ATCCCACCATGATGAGCGACCTGGGCGAGTACGAGTGCAAGGTGCGCAAC
AGCGATGGCGAACTGCAGACGGCCAAGGCCTTTCTCAACATACAATATAA
GGCCAAGGTGATTTACGCCCCGCCGGAGGTTTTCCTGCCGTACGGCCAGC
CCGCCGTGCTCGATTGTCACTTCCGGGCGAATCCGCCGCTGAAGAATTTG
CGCTGGGAGAAGGACGGCCTGCTCTTCGACTCGTACAATGTGCCCGGGGT
CTTCTACAAGATGAACGGCAGCCTGTTCTTCGCCAAAGTGGACGAGAACC
ATGCCGGCAGCTACACTTGCACGCCCTACAACGACCTCGGCACGGACGGA
CCATCGCCGGTCATCAGCGTGATTGTGCTCCGACCGCCCATCTTCAGCGT
CACGCCCAAGGCCATCTACATCCAGAAGCTGGGCGAGGCCGCCGAGCTGC
CCTGCGAAGCCATCGACCGCGACGGAAACAATCGGCCCTCCATTATCTGG
GGCAGGAAAGACGGGCAGCCGCTGCCGGCGGACAGGTTCAGTCTCAGCGG
CGGCAATCTGACTATCACGGGATTGGTGGAGGGGGACCGTGGAATATACG
AGTGCTCGGCGACCAACGAGGCGGCCACCATTACGGCGGAGGCCGAGCTC
ATGATTGAGAACATCGCACCGCGGGCGCCGTACAATCTCACGGCCAACAG
CACGGAGACCTGCATCACCATACGCTGGCAGCCAGGATACCTTCGTCCCA
ACTTGGAGTACACTGTTTGGTATCGACTCATGGAGGCACCCGAATGGCGA
ACGCTTCGCGTGTTGGATAAAAAGGTGATGGAGGCGACGGTGCAGCACCT
TCAGCCAGGAAAAGAGTACGAATTTATGGTGCTCAGCCAGGACAAGTACG
GAGACGGCATGTTCAGCAAGCAGTTCCGCTTTCAAACGCTACCCTCGCCC
ATTAGAGCGGATGACTTTGATGCCCAGCAGCTGCAACACGATCTGGGTCA
GGTCACTGCGCCTGCCGGGGGACTGGGAGCTCCCTGGAATCTCACTGCCA
TTAGCAACCAGCAGGGCTGGCTCCTCCACTGGGAGCATCCCGTCCAGGGA
TTGGAAGGCCTGCGCCTGTACGCCGTTCGTTGGTGGAAGGAGCCGGAGCA
TTTCCTCATCGGCCACGCAGAGACCTTCGACAACTACTACCAGCTGCGCC
ACCTCAAGGAGGACACACTGTTCAAGGTGCAGGTCCTGGCGGTGGGCACC
GAAACCCAGCAATCGGTGCCCAGTCACGAGCTCCTCATCGACGTGCCATC
GCAGCGTAAAGTGCGGGCCCTGATCATCGGCAGTTCCGTGGGCGTCATCT
TCCTGCTCTGCGCCCTGTGCGCTTTTTTATACGTGAAGCGGAGCTGCCTA
AGGCATCTGTTCGCCAAGGATAGCTCCGCCAGCGAGGATGAGGACACCGC
CGAGAGCGGCGACTGCGACAGCGACGAACAGGATCAGCGGGATCGGGACA
GCATCAAGATACGCCAGTCCACCGCAAGCTTTCTAGACCAT
BO05845.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:07:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16857-RA | 2160 | CG16857-PA | 1..2157 | 17..2173 | 10770 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:07:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16857-RA | 2730 | CG16857-RA | 350..2511 | 12..2173 | 10780 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:07:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 4331031..4331611 | 1593..2173 | 2905 | 100 | Plus |
2L | 23513712 | 2L | 4328938..4329445 | 239..746 | 2540 | 100 | Plus |
2L | 23513712 | 2L | 4329511..4329920 | 747..1156 | 2050 | 100 | Plus |
2L | 23513712 | 2L | 4330312..4330542 | 1156..1386 | 1155 | 100 | Plus |
2L | 23513712 | 2L | 4324903..4325129 | 12..238 | 1105 | 99.1 | Plus |
2L | 23513712 | 2L | 4330754..4330962 | 1384..1592 | 1045 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:07:32 has no hits.
BO05845.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:48:57 Download gff for
BO05845.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16857-RA | 329..2500 | 9..2181 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:47:38 Download gff for
BO05845.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16857-RA | 355..2511 | 17..2175 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:58:30 Download gff for
BO05845.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16857-RA | 336..2492 | 17..2175 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:51:59 Download gff for
BO05845.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16857-RA | 355..2511 | 17..2175 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:51:59 Download gff for
BO05845.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4330756..4330962 | 1386..1592 | 100 | -> | Plus |
2L | 4330313..4330541 | 1157..1385 | 100 | -> | Plus |
2L | 4324908..4325129 | 17..238 | 99 | -> | Plus |
2L | 4328938..4329445 | 239..746 | 100 | -> | Plus |
2L | 4329511..4329920 | 747..1156 | 100 | -> | Plus |
2L | 4331031..4331611 | 1593..2175 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:47:38 Download gff for
BO05845.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 4330756..4330962 | 1386..1592 | 100 | -> | Plus |
arm_2L | 4330313..4330541 | 1157..1385 | 100 | -> | Plus |
arm_2L | 4324908..4325129 | 17..238 | 99 | -> | Plus |
arm_2L | 4328938..4329445 | 239..746 | 100 | -> | Plus |
arm_2L | 4329511..4329920 | 747..1156 | 100 | -> | Plus |
arm_2L | 4331031..4331611 | 1593..2175 | 99 | | Plus |
BO05845.pep Sequence
Translation from 16 to 2191
> BO05845.pep
MPAKRSRTFRQSGSALLALLAIILLMNISCTSAARDHRRQTNLEAKVGSH
VVFNCYIDFPFDAPIPYLVHWTKDNKKIFTWYEQETSTSELFNGRLHLVE
NHPEFGRASVNLTAIRESDQGWYHCQVSFPNRSPSVRNNGTAYHLAVQGG
SLIRIPPVNQTIREGQTAFFHCVMKHPENSQASWYKDGVLLQEVQDLVRR
FYMGPDGSLSIDPTMMSDLGEYECKVRNSDGELQTAKAFLNIQYKAKVIY
APPEVFLPYGQPAVLDCHFRANPPLKNLRWEKDGLLFDSYNVPGVFYKMN
GSLFFAKVDENHAGSYTCTPYNDLGTDGPSPVISVIVLRPPIFSVTPKAI
YIQKLGEAAELPCEAIDRDGNNRPSIIWGRKDGQPLPADRFSLSGGNLTI
TGLVEGDRGIYECSATNEAATITAEAELMIENIAPRAPYNLTANSTETCI
TIRWQPGYLRPNLEYTVWYRLMEAPEWRTLRVLDKKVMEATVQHLQPGKE
YEFMVLSQDKYGDGMFSKQFRFQTLPSPIRADDFDAQQLQHDLGQVTAPA
GGLGAPWNLTAISNQQGWLLHWEHPVQGLEGLRLYAVRWWKEPEHFLIGH
AETFDNYYQLRHLKEDTLFKVQVLAVGTETQQSVPSHELLIDVPSQRKVR
ALIIGSSVGVIFLLCALCAFLYVKRSCLRHLFAKDSSASEDEDTAESGDC
DSDEQDQRDRDSIKIRQSTASFLDH
BO05845.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:28:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16857-PA | 719 | CG16857-PA | 1..719 | 1..719 | 3835 | 100 | Plus |
tutl-PE | 902 | CG15427-PE | 267..882 | 47..677 | 893 | 32.1 | Plus |
tutl-PC | 903 | CG15427-PC | 267..882 | 47..677 | 893 | 32.1 | Plus |
tutl-PI | 963 | CG15427-PI | 267..882 | 47..677 | 893 | 32.1 | Plus |
tutl-PF | 963 | CG15427-PF | 267..882 | 47..677 | 893 | 32.1 | Plus |
tutl-PE | 902 | CG15427-PE | 115..524 | 16..424 | 370 | 28.8 | Plus |
tutl-PC | 903 | CG15427-PC | 115..524 | 16..424 | 370 | 28.8 | Plus |
tutl-PI | 963 | CG15427-PI | 115..524 | 16..424 | 370 | 28.8 | Plus |