Clone BO05846 Report

Search the DGRC for BO05846

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:58
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptCG4766-RA
Protein status:BO05846.pep: validated full length
Sequenced Size:1138

Clone Sequence Records

BO05846.3prime Sequence

845 bp (804 high quality bases) assembled on 2005-12-02

> BO05846.3prime
ATGGTCTAGAAAGCTTGCCAACTTCTCAAAGGCGTTGGCATTTGTGAGGA
GCTCGCGGGTCAAGCGCCACACCTGCTTGGCCGCCTGCTCCAAAGCACTG
GGGGATTTACCCTTGAACATGTCCAGTGCGGGAAGGAAGTAGTGGGGACA
ACGGCGATACTGCAGACAGGATATCAGCTGCAGGAATATCCCATTGATGC
GGTCAGCGATGCAGCCCTCGTCCCACTCAAAGTCCCGCGGATGCTTCTCG
CACTCGTAGAGCAGCAGGTTCTTCAGGTGATACGCACTGATGGGATTGCC
TGGTAAATCCAGATGCCTGTCCCTCAGGGTCTTCAGCATGCTCAGACAAC
GTCGACGACAGCCACCTTGCAGCAGACGGTTTTCGGCCTCGAAGAAGCTG
AGCACCCAGGCATCGCCCTCCATGCTGGCGGCATTGTTGTTCTTGTTCTG
CATGATGACGCTCTCCTTGGACAGAAGATCGAAGCCCTCGGTCTTGACCT
CCGCCACGATGTTGGGATGTGGCCACGGGAGATGTGGTACCGGCCAGTGG
GCCGCCGATCTTGGCCAGATGCCTGAGCACTTAAATGCCGGCGTAATCTG
GACCACGAATCGCTCCCGAATGCGCAACTTCACCTCGCTGGTGTCGCCCA
CCATTTTGACCATGTCGCGGTAGACACTTTTATCGCACGCCTGGGCCACC
AGAGTCTGGAAACGGGCACGGATCTTCCGGGAGGACAAATAACCACTGGC
CGTTATGAACTCCACCCACAGGGACATGGACCGCTTCCTTCCATCGCTCA
GCTTCAGAACAGCACATCCCGGCAAGGTGCCATCGTCCACGAAAT

BO05846.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:29:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG4766-PA 1107 CG4766-RA 278..1104 845..19 4135 100 Minus
CG4746-PA 1098 mab-2-RA 283..404 840..719 385 92.6 Minus
CG4746-PA 1098 mab-2-RA 900..980 214..134 230 91.3 Minus
CG4746-PA 1098 mab-2-RA 690..749 424..365 175 91.6 Minus
CG4746-PA 1098 mab-2-RA 835..878 279..236 170 95.4 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:44:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG4766-RA 2673 CG4766-RA 879..1705 845..19 4135 100 Minus
mab-21-RA 2082 CG4746-RA 642..1408 840..65 1720 82 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:44:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5998945..5999426 364..845 2410 100 Plus
X 23542271 X 5998476..5998824 19..367 1745 100 Plus
X 23542271 X 6012072..6012540 363..840 1065 82 Plus
X 23542271 X 6008857..6009151 65..359 650 81.4 Plus
Blast to na_te.dros performed on 2015-02-13 15:44:23 has no hits.

BO05846.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:32:51 Download gff for BO05846.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4766-PA 278..1107 15..845 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:58:54 Download gff for BO05846.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4766-PA 278..1107 15..845 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:05:24 Download gff for BO05846.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4766-RA 879..1717 5..845 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:21:20 Download gff for BO05846.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4766-RA 879..1717 5..845 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:21:20 Download gff for BO05846.3prime
Subject Subject Range Query Range Percent Splice Strand
X 5998464..5998822 5..365 98 <- Plus
X 5998947..5999426 366..845 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:05:24 Download gff for BO05846.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 5892497..5892855 5..365 98 <- Plus
arm_X 5892980..5893459 366..845 100   Plus

BO05846.5prime Sequence

770 bp (752 high quality bases) assembled on 2005-11-29

> BO05846.5prime
GAAGTTATCAGTCGACATGCTGGTGCCGCCGGACATGATGGCCGCCCAGA
CGCGCATGGTCTATCAGATGAATCGATTCTGCACGGAGAGGGTTCAGGCC
AGGATGTACAAGACGGCCACCGCCATCCGGGAGATCTGCAAGATCGTCCA
GGACATCCTCAAAGAGGTGGAACTGCAGGAGCCGCGATTCATCTCCAGCC
TCGTCGAGTGCAATGGCAGATTCGAGGGCGTTGAAGTGATATCCCCGAAT
GAATTCGAGATAGTGCTGTATCTGAATCAAATGGGTGTCTTCAATTTCGT
GGACGATGGCACCTTGCCGGGATGTGCTGTTCTGAAGCTGAGCGATGGAA
GGAAGCGGTCCATGTCCCTGTGGGTGGAGTTCATAACGGCCAGTGGTTAT
TTGTCCTCCCGGAAGATCCGTGCCCGTTTCCAGACTCTGGTGGCCCAGGC
GTGCGATAAAAGTGTCTACCGCGACATGGTCAAAATGGTGGGCGACACCA
GCGAGGTGAAGTTGCGCATTCGGGAGCGATTCGTGGTCCAGATTACGCCG
GCATTTAAGTGCTCAGGCATCTGGCCAAGATCGGCGGCCCACTGGCCGGT
ACCACATCTCCCGTGGCCACATCCCAACATCGTGGCGGAGGTCAAGACCG
AGGGCTTCGATCTTCTGTCCAAGGAGAGCGTCATCATGCAGAACAAGAAC
AACAATGCCGCCAGCATGGAGGGCGATGCCTGNGTGCTCAGCTTCTTCGA
GGCCGAAAACCGTCTGCTGC

BO05846.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:29:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG4766-PA 1107 CG4766-RA 1..754 17..770 3751 99.8 Plus
CG4746-PA 1098 mab-2-RA 283..404 299..420 385 92.6 Plus
CG4746-PA 1098 mab-2-RA 690..745 715..770 136 89.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:47:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG4766-RA 2673 CG4766-RA 601..1355 16..770 3764 99.9 Plus
mab-21-RA 2082 CG4746-RA 486..1104 143..770 1269 80.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:47:48
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5998950..5999503 770..217 2759 99.8 Minus
X 23542271 X 6012078..6012696 770..143 1219 79.9 Minus
X 23542271 X 5999994..6000197 219..16 1020 100 Minus
Blast to na_te.dros performed on 2015-02-11 02:47:50 has no hits.

BO05846.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:32:52 Download gff for BO05846.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4766-PA 1..754 17..770 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:58:56 Download gff for BO05846.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4766-PA 1..754 17..770 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:51:03 Download gff for BO05846.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4766-RA 596..1355 10..770 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:43:18 Download gff for BO05846.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4766-RA 596..1355 10..770 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:43:18 Download gff for BO05846.5prime
Subject Subject Range Query Range Percent Splice Strand
X 5998950..5999500 220..770 99 <- Minus
X 5999994..6000202 10..219 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:51:03 Download gff for BO05846.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 5892983..5893533 220..770 99 <- Minus
arm_X 5894027..5894235 10..219 98   Minus

BO05846.complete Sequence

1138 bp (1138 high quality bases) assembled on 2005-10-19

GenBank Submission: FJ630165

> BO05846.complete
GAAGTTATCAGTCGACATGCTGGTGCCGCCGGACATGATGGCCGCCCAGA
CGCGCATGGTCTATCAGATGAATCGATTCTGCACGGAGAGGGTTCAGGCC
AGGATGTACAAGACGGCCACCGCCATCCGGGAGATCTGCAAGATCGTCCA
GGACATCCTCAAAGAGGTGGAACTGCAGGAGCCGCGATTCATCTCCAGCC
TCGTCGAGTGCAATGGCAGATTCGAGGGCGTTGAAGTGATATCCCCGAAT
GAATTCGAGATAGTGCTGTATCTGAATCAAATGGGTGTCTTCAATTTCGT
GGACGATGGCACCTTGCCGGGATGTGCTGTTCTGAAGCTGAGCGATGGAA
GGAAGCGGTCCATGTCCCTGTGGGTGGAGTTCATAACGGCCAGTGGTTAT
TTGTCCTCCCGGAAGATCCGTGCCCGTTTCCAGACTCTGGTGGCCCAGGC
GTGCGATAAAAGTGTCTACCGCGACATGGTCAAAATGGTGGGCGACACCA
GCGAGGTGAAGTTGCGCATTCGGGAGCGATTCGTGGTCCAGATTACGCCG
GCATTTAAGTGCTCAGGCATCTGGCCAAGATCGGCGGCCCACTGGCCGGT
ACCACATCTCCCGTGGCCACATCCCAACATCGTGGCGGAGGTCAAGACCG
AGGGCTTCGATCTTCTGTCCAAGGAGAGCGTCATCATGCAGAACAAGAAC
AACAATGCCGCCAGCATGGAGGGCGATGCCTGGGTGCTCAGCTTCTTCGA
GGCCGAAAACCGTCTGCTGCAAGGTGGCTGTCGTCGACGTTGTCTGAGCA
TGCTGAAGACCCTGAGGGACAGGCATCTGGATTTACCAGGCAATCCCATC
AGTGCGTATCACCTGAAGAACCTGCTGCTCTACGAGTGCGAGAAGCATCC
GCGGGACTTTGAGTGGGACGAGGGCTGCATCGCTGACCGCATCAATGGGA
TATTCCTGCAGCTGATATCCTGTCTGCAGTATCGCCGTTGTCCCCACTAC
TTCCTTCCCGCACTGGACATGTTCAAGGGTAAATCCCCCAGTGCTTTGGA
GCAGGCGGCCAAGCAGGTGTGGCGCTTGACCCGCGAGCTCCTCACAAATG
CCAACGCCTTTGAGAAGTTGGCAAGCTTTCTAGACCAT

BO05846.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:20:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG4766-RA 1107 CG4766-PA 1..1104 17..1120 5520 100 Plus
mab-21-RA 1098 CG4746-PA 127..1049 143..1074 1865 80.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:20:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG4766-RA 2673 CG4766-RA 601..1705 16..1120 5525 100 Plus
mab-21-RA 2082 CG4746-RA 486..1408 143..1074 1865 80.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:20:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5998945..5999503 775..217 2795 100 Minus
X 23542271 X 5998476..5998824 1120..772 1745 100 Minus
X 23542271 X 6012072..6012696 776..143 1260 80.3 Minus
X 23542271 X 5999994..6000197 219..16 1020 100 Minus
X 23542271 X 6008857..6009151 1074..780 650 81.4 Minus
Blast to na_te.dros performed on 2014-11-28 01:20:56 has no hits.

BO05846.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:29:20 Download gff for BO05846.complete
Subject Subject Range Query Range Percent Splice Strand
CG4766-RA 1..1107 17..1124 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:55:40 Download gff for BO05846.complete
Subject Subject Range Query Range Percent Splice Strand
CG4766-RA 596..1717 10..1134 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:47:05 Download gff for BO05846.complete
Subject Subject Range Query Range Percent Splice Strand
CG4766-RA 602..1705 17..1122 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:29:20 Download gff for BO05846.complete
Subject Subject Range Query Range Percent Splice Strand
CG4766-RA 596..1717 10..1134 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:51:38 Download gff for BO05846.complete
Subject Subject Range Query Range Percent Splice Strand
CG4766-RA 602..1705 17..1122 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:51:38 Download gff for BO05846.complete
Subject Subject Range Query Range Percent Splice Strand
X 5998474..5998822 774..1122 99 <- Minus
X 5998947..5999500 220..773 100 <- Minus
X 5999994..6000196 17..219 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:47:05 Download gff for BO05846.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 5892507..5892855 774..1122 99 <- Minus
arm_X 5892980..5893533 220..773 100 <- Minus
arm_X 5894027..5894229 17..219 100   Minus

BO05846.pep Sequence

Translation from 16 to 1138

> BO05846.pep
MLVPPDMMAAQTRMVYQMNRFCTERVQARMYKTATAIREICKIVQDILKE
VELQEPRFISSLVECNGRFEGVEVISPNEFEIVLYLNQMGVFNFVDDGTL
PGCAVLKLSDGRKRSMSLWVEFITASGYLSSRKIRARFQTLVAQACDKSV
YRDMVKMVGDTSEVKLRIRERFVVQITPAFKCSGIWPRSAAHWPVPHLPW
PHPNIVAEVKTEGFDLLSKESVIMQNKNNNAASMEGDAWVLSFFEAENRL
LQGGCRRRCLSMLKTLRDRHLDLPGNPISAYHLKNLLLYECEKHPRDFEW
DEGCIADRINGIFLQLISCLQYRRCPHYFLPALDMFKGKSPSALEQAAKQ
VWRLTRELLTNANAFEKLASFLDH

BO05846.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:52:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG4766-PA 368 CG4766-PA 1..368 1..368 1941 100 Plus
mab-21-PA 365 CG4746-PA 1..365 1..368 1567 77.7 Plus