Clone Sequence Records
BO05847.3prime Sequence
936 bp (777 high quality bases) assembled on 2005-12-02
> BO05847.3prime
ATGGTCTAGAAAGCTTGCCTTCTTGCCCGCATCTTCCTTCAATCCCACAG
TGCGGTTGAACACTAGGTGGTTCGCACTGGTGTCAGGATCTACGGAGAAG
AAGCCAATCCTCTCGAACTGGAACTTGTCGTAAACCTTGGCCTGGTTTAG
GGCCCGATCCGCGAATGCCACCACCACCGACATGGATTGCTCACTGATGT
CGCTCAGGAAACCGCCGGGCACCTCGTTGGGATCCTCGGGATTCTTGTGC
TTGAAGAGCTGCTCGTACAGACGCACTTCCAGCTGTATCGGCTGCGATAC
CCACTGGACAAAAGCCTTGGGCTTCTCGGCCTGCTCGGCAGGTTGGCTGG
TGCAGATTAGTTCCACCACCTGACCAGTCGCCGGATCCTTTACTATCTCA
TCCACGCTGATTACGAGACCCGCGTGCCGGAGACCCACAGATTGCTTCGG
TGCCAGACGACGGTATCCCTTTTCAGGCTCCAACTTGAAGTCTCCCTGCT
CAATATAGATCACCTTGTCTAGGGTGATCTTATGAGTTCCTTGCTGTGGG
TTTTGCGGGAAATCAGGCACTTCTAGCTGCACGGGCGCTGCATGAGGGAA
ATTCTTTATGGTAACTTTGAGCGGTTCCAGGACAACCAACCGACGGGGAG
CTGTAACATTTAGCACATCCCGCACTGCTGCCTCCAACATGGCGGGGTCG
ACGGCGATCTGGGCACCCGTTACGCCCATCTGGGCGCAGAAGTTGTTGAT
GGCCTCTGCTGGGAAGCCTCTACGTCTCAGAGCCGTCAGAGTAAACAGCC
TGGGATCGTCCCAGTCGTGGACAATCTGCTCCGTGATCAGCTTTGCAATC
TTGCGCTTTGACACAAGTGCGTAGTTCATGTTCAGCCTACCGTATTCCCA
CTGCACCGGGCAGTAGATACCCAAAGCGTTGCACAG
BO05847.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:29:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10506-PA | 2337 | Aats-gln-RA | 1417..2334 | 936..19 | 4590 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:02:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-gln-RA | 2455 | CG10506-RA | 1464..2381 | 936..19 | 4590 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:01:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25263341..25264258 | 19..936 | 4590 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:02:01 has no hits.
BO05847.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:32:53 Download gff for
BO05847.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10506-PA | 1417..2337 | 16..936 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:58:57 Download gff for
BO05847.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10506-PA | 1417..2337 | 16..936 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:37:20 Download gff for
BO05847.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 1464..2385 | 15..936 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:36:49 Download gff for
BO05847.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 1464..2385 | 15..936 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:36:49 Download gff for
BO05847.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25263337..25264258 | 15..936 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:37:20 Download gff for
BO05847.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21089059..21089980 | 15..936 | 99 | | Plus |
BO05847.5prime Sequence
908 bp (789 high quality bases) assembled on 2005-12-02
> BO05847.5prime
GAAGTTATCAGTCGACATGGCTGGAGATGATCTGATTGCGAAATTCCAGG
CGCTCGGCATGAGCGAGCAAAAGGCGAAGGAAACTTTGAAGAATGCCAAC
GTGACAAAGAATCTCCAGCTGTCGCTGGCGGCGGCGGGAAGCGCCACCCT
ATCCGACGGCACTGGTATGCTGATCTACCACATGGCTACCAAGCTGAAGC
CGCAGACTGCGGACCATCTGCCTCTTCTGGTGCGCTACATAGTGGAGCAC
AAGCTGGACAACACTCAGCGCGTTGATGCCGCCCTGGAGTACCTGCTCAA
GTGCGGTCAGAGCCTGAATGCCAACATAGATCTGCAGGCGCTTGAGAAGG
AGTGCGGCGTTGGAGTGGTGGTCACTCCGGAGCAGATCGAGCGCACTGTG
CAGGCCAAGATCAAGGCCAGCTACAAGGAGGCCTTGTTGGAGCAACGCTA
CCATTTTAACTCTTTTAAAATCCTGCAAGATGTCCGGGGAGAACTCAAGT
GGGCGGATGCCAAGTCCGTGAAGGCGGCCATCGATGTGGAGATCTTCGAT
CTGTTGGGTCCCAAAACAGAAGCAGACTTGAAACCTCAGACAAAAGCAAA
CGATAAGCCGAAGGCTGCAAAACCGAAAGCTGAAGTAACTCCTGCCGCTC
AAACGGCTGAAGCTGCATCCGATGGAGCCACCACCATTTCGGAACTCATG
AAAACCAAGGTACACTTCCATGCTCCCGGAGAGAACTTCAAGGCAGATGG
CTACGTGGTCACCGAGCACACGGAGCGGCTACTAAAGGAGCACCTGGCGA
GAACTGGAGGCAAAGTGCACACACGATTTCCGCCAGAGCCGAATGGCATC
CTGCACATCGGTCACGCAAAGGCTATTAACATTAACTTGGGATACGCGGC
TGCCCACG
BO05847.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:29:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10506-PA | 2337 | Aats-gln-RA | 1..892 | 17..908 | 4435 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:55:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-gln-RA | 2455 | CG10506-RA | 48..939 | 17..908 | 4445 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:55:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25264783..25265674 | 908..17 | 4445 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:55:43 has no hits.
BO05847.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:32:54 Download gff for
BO05847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10506-PA | 1..892 | 17..908 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 00:58:58 Download gff for
BO05847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10506-PA | 1..892 | 17..908 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:16:27 Download gff for
BO05847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 39..939 | 7..908 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:45:11 Download gff for
BO05847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 39..939 | 7..908 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:45:11 Download gff for
BO05847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25264783..25265683 | 7..908 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:16:27 Download gff for
BO05847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21090505..21091405 | 7..908 | 99 | | Minus |
BO05847.complete Sequence
2368 bp assembled on 2008-08-14
GenBank Submission: FJ630166
> BO05847.complete
GAAGTTATCAGTCGACATGGCTGGAGATGATCTGATTGCGAAATTCCAGG
CGCTCGGCATGAGCGAGCAAAAGGCGAAGGAAACTTTGAAGAATGCCAAC
GTGACAAAGAATCTCCAGCTGTCGCTGGCGGCGGCGGGAAGCGCCACCCT
ATCCGACGGCACTGGTATGCTGATCTACCACATGGCTACCAAGCTGAAGC
CGCAGACTGCGGACCATCTGCCTCTTCTGGTGCGCTACATAGTGGAGCAC
AAGCTGGACAACACTCAGCGCGTTGATGCCGCCCTGGAGTACCTGCTCAA
GTGCGGTCAGAGCCTGAATGCCAACATAGATCTGCAGGCGCTTGAGAAGG
AGTGCGGCGTTGGAGTGGTGGTCACTCCGGAGCAGATCGAGCGCACTGTG
CAGGCCAAGATCAAGGCCAGCTACAAGGAGGCCTTGTTGGAGCAACGCTA
CCATTTTAACTCTTTTAAAATCCTGCAAGATGTCCGGGGAGAACTCAAGT
GGGCGGATGCCAAGTCCGTGAAGGCGGCCATCGATGTGGAGATCTTCGAT
CTGTTGGGTCCCAAAACAGAAGCAGACTTGAAACCTCAGACAAAAGCAAA
CGATAAGCCGAAGGCTGCAAAACCGAAAGCTGAAGTAACTCCTGCCGCTC
AAACGGCTGAAGCTGCATCCGATGGAGCCACCACCATTTCGGAACTCATG
AAAACCAAGGTACACTTCCATGCTCCCGGAGAGAACTTCAAGGCAGATGG
CTACGTGGTCACCGAGCACACGGAGCGGCTACTAAAGGAGCACCTGGCGA
GAACTGGAGGCAAAGTGCACACACGATTTCCGCCAGAGCCGAATGGCATC
CTGCACATCGGTCACGCAAAGGCTATTAACATTAACTTTGGATACGCGGC
TGCCCACGATGGAGTCTGTTACTTGCGCTACGACGACACCAATCCCGAGA
AGGAGGAGGAGAAGTTCTTTTTGGCCATCAAGGAGATGGTGGAATGGCTG
GGCTACAAACCATTCAAGATCACCTACTCCTCGGACAACTTCCAGCAGCT
GTACGAGTGGGCTGTTGTGCTGATTAACAAAGGATTGGCCTACGTGTGTC
ACCAGAAGGCGGAGGAACTGAAAGGCTTCAATCCGAAGCCCAGCCCTTGG
AGGGAGCGTCCCATTGAGGAGTCACTTCGGCTGTTTGAAGACATGAAGCG
TGGAAAGATCGACGAGGGAGCGGCCACACTGCGCATGAAGGTCACCCTGG
AGGAGGGCAAGATGGACCCGGTGGCGTATCGCATTAAGTTTATCTCACAC
CACCGTACGGGCTCTGACTGGTGCATTTACCCCACGTATGATTATACTCA
TTGCCTTTGTGACTCTCTCGAGGATATAACCCACTCACTGTGCACCAAGG
AGTTCCAGTCGAGACGATCCTCCTACTACTGGCTGTGCAACGCTTTGGGT
ATCTACTGCCCGGTGCAGTGGGAATACGGTAGGCTGAACATGAACTACGC
ACTTGTGTCAAAGCGCAAGATTGCAAAGCTGATCACGGAGCAGATTGTCC
ACGACTGGGACGATCCCAGGCTGTTTACTCTGACGGCTCTGAGACGTAGA
GGCTTCCCAGCAGAGGCCATCAACAACTTCTGCGCCCAGATGGGCGTAAC
GGGTGCCCAGATCGCCGTCGACCCCGCCATGTTGGAGGCAGCAGTGCGGG
ATGTGCTAAATGTTACAGCTCCCCGTCGGTTGGTTGTCCTGGAACCGCTC
AAAGTTACCATAAAGAATTTCCCTCATGCAGCGCCCGTGCAGCTAGAAGT
GCCTGATTTCCCGCAAAACCCACAGCAAGGAACTCATAAGATCACCCTAG
ACAAGGTGATCTATATTGAGCAGGGAGACTTCAAGTTGGAGCCTGAAAAG
GGATACCGTCGTCTGGCACCGAAGCAATCTGTGGGTCTCCGGCACGCGGG
TCTCGTAATCAGCGTGGATGAGATAGTAAAGGATCCGGCGACTGGTCAGG
TGGTGGAACTAATCTGCACCAGCCAACCTGCCGAGCAGGCCGAGAAGCCC
AAGGCTTTTGTCCAGTGGGTATCGCAGCCGATACAGCTGGAAGTGCGTCT
GTACGAGCAGCTCTTCAAGCACAAGAATCCCGAGGATCCCAACGAGGTGC
CCGGCGGTTTCCTGAGCGACATCAGTGAGCAATCCATGTCGGTGGTGGTG
GCATTCGCGGATCGGGCCCTAAACCAGGCCAAGGTTTACGACAAGTTCCA
GTTCGAGAGGATTGGCTTCTTCTCCGTAGATCCTGACACCAGTGCGAACC
ACCTAGTGTTCAACCGCACTGTGGGATTGAAGGAAGATGCGGGCAAGAAG
GCAAGCTTTCTAGACCAT
BO05847.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:28:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-gln-RA | 2337 | CG10506-PA | 1..2334 | 17..2350 | 11670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:28:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-gln-RA | 2455 | CG10506-RA | 48..2381 | 17..2350 | 11670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:28:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25263341..25265674 | 2350..17 | 11670 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:28:18 has no hits.
BO05847.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:41:19 Download gff for
BO05847.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 39..2385 | 7..2354 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:44:01 Download gff for
BO05847.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 48..2381 | 17..2352 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:03:50 Download gff for
BO05847.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 48..2381 | 17..2352 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:12:21 Download gff for
BO05847.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 48..2381 | 17..2352 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:12:21 Download gff for
BO05847.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25263338..25265674 | 17..2352 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:01 Download gff for
BO05847.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21089060..21091396 | 17..2352 | 99 | | Minus |
BO05847.pep Sequence
Translation from 16 to 2368
> BO05847.pep
MAGDDLIAKFQALGMSEQKAKETLKNANVTKNLQLSLAAAGSATLSDGTG
MLIYHMATKLKPQTADHLPLLVRYIVEHKLDNTQRVDAALEYLLKCGQSL
NANIDLQALEKECGVGVVVTPEQIERTVQAKIKASYKEALLEQRYHFNSF
KILQDVRGELKWADAKSVKAAIDVEIFDLLGPKTEADLKPQTKANDKPKA
AKPKAEVTPAAQTAEAASDGATTISELMKTKVHFHAPGENFKADGYVVTE
HTERLLKEHLARTGGKVHTRFPPEPNGILHIGHAKAININFGYAAAHDGV
CYLRYDDTNPEKEEEKFFLAIKEMVEWLGYKPFKITYSSDNFQQLYEWAV
VLINKGLAYVCHQKAEELKGFNPKPSPWRERPIEESLRLFEDMKRGKIDE
GAATLRMKVTLEEGKMDPVAYRIKFISHHRTGSDWCIYPTYDYTHCLCDS
LEDITHSLCTKEFQSRRSSYYWLCNALGIYCPVQWEYGRLNMNYALVSKR
KIAKLITEQIVHDWDDPRLFTLTALRRRGFPAEAINNFCAQMGVTGAQIA
VDPAMLEAAVRDVLNVTAPRRLVVLEPLKVTIKNFPHAAPVQLEVPDFPQ
NPQQGTHKITLDKVIYIEQGDFKLEPEKGYRRLAPKQSVGLRHAGLVISV
DEIVKDPATGQVVELICTSQPAEQAEKPKAFVQWVSQPIQLEVRLYEQLF
KHKNPEDPNEVPGGFLSDISEQSMSVVVAFADRALNQAKVYDKFQFERIG
FFSVDPDTSANHLVFNRTVGLKEDAGKKASFLDH
BO05847.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:44:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-gln-PA | 778 | CG10506-PA | 1..778 | 1..778 | 4067 | 100 | Plus |
| Aats-glupro-PA | 1714 | CG5394-PA | 202..688 | 265..755 | 541 | 30.2 | Plus |
