Clone Sequence Records
BO05910.3prime Sequence
852 bp (736 high quality bases) assembled on 2005-12-02
> BO05910.3prime
ATGGTCTAGAAAGCTTGCATCCTCTTCCTCCTCCTCATCCTCCTCGTTCG
CACGACCCGCCCCCGATCCCTTGTGGTTGAACTCCTTCTCTGGATCGAAC
TGCATGCCCTCCTGGTCGGCGCCATCCTCCTCGTCATCGTCGCCAGCCAC
CTGGGCGTTCTCGGCCTCAGCGCGCTCCAGGCGTCTGGCCAGATCCGCCT
CGTCGATGGCCGTAACCAGTTTGGGTGCCATGATCACCTTGAACTCTCCA
TCGTACTCGCTGGTCTTGGCGCGAATGTGCTCAATGGCCACCTCCAGAGC
CTTTAAACCGTCTGTCTTCTTGGTAGTGGATGTGGTCATTACATAGAGTG
GCGGTGCTATCAGGTTGATGCGAATGGGCAGCTCCTCGGTGCTCAGCTCC
AGGCCCTTGGTGAGCGATGCCTTGACAGCGTCGATGCCCTCGTAACCGTA
GCAGGAGCACTCGATGTCCGCACGGATCTTGACAGTGGGCGAGACCAGCT
TCCGCTTGATGTTGCTCAACAGGACCTCCTTGGTCTCCGGTTCCAGGTTG
CACTCATCGAAGACGGTGGGATCGGTGACCGATTGCTTGAAGATGTCGTA
GGCGACCGTCTTGTTGTTGTACTTCTTCTCGAAGTGCCAGGCGGTCTTCT
GGTAGAGATCTTCCAGCTTCTCGTTGCCCTCGAAGCCGAGTATGTCGGCG
ACATGGCGGAGCAGTGAGTTGATGGCCTTGGCCTTAGCGAAGCGCTCGGT
GCACTTCTCGACATCTTCGGGCGAAACGCGACGCTTCGACAGATCGATGT
AGCCCTTCTCCCTTGTCACACGGATAACCACCACCGGGTCGGTCTTGCCG
AC
BO05910.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:30:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9946-PA | 1026 | eIF-2alpha-RA | 231..1023 | 811..19 | 3965 | 100 | Minus |
CG9946-PA | 1026 | eIF-2alpha-RA | 190..224 | 852..818 | 150 | 97.1 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 14:53:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF-2alpha-RB | 1519 | CG9946-RB | 304..1137 | 852..19 | 4110 | 99.6 | Minus |
eIF-2alpha-RA | 1200 | CG9946-RA | 304..1137 | 852..19 | 4110 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 14:53:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16446178..16446690 | 340..852 | 2445 | 98.4 | Plus |
X | 23542271 | X | 16445558..16445885 | 19..346 | 1640 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 14:53:23 has no hits.
BO05910.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:34:29 Download gff for
BO05910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9946-PA | 190..1026 | 18..852 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:01:15 Download gff for
BO05910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9946-PA | 190..1026 | 18..852 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 05:56:22 Download gff for
BO05910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-2alpha-RA | 304..1141 | 13..852 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:05:22 Download gff for
BO05910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-2alpha-RA | 304..1141 | 13..852 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:05:22 Download gff for
BO05910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16445554..16445885 | 13..346 | 99 | <- | Plus |
X | 16446185..16446690 | 347..852 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 05:56:22 Download gff for
BO05910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16339587..16339918 | 13..346 | 99 | <- | Plus |
arm_X | 16340218..16340723 | 347..852 | 99 | | Plus |
BO05910.5prime Sequence
911 bp (889 high quality bases) assembled on 2005-11-29
> BO05910.5prime
GAAGTTATCAGTCGACATGGCCCTGACGTCGCGCTTCTACAACGAGCGGT
ATCCGGAGATCGAGGATGTCGTTATGGTGAACGTGCTGTCCATCGCCGAG
ATGGGCGCCTACGTTCATCTGCTTGAGTACAACAACATCGAGGGCATGAT
CCTGCTGTCGGAGCTGTCCCGCCGGCGCATCCGCTCCATCAACAAGCTGA
TTCGTGTCGGCAAGACCGAACCGGTGGTGGTTATCCGTGTTGACAAGGAG
AAGGGCTACATCGATCTGTCGAAGCGTCGCGTTTCGCCCGAAGATGTCGA
GAAGTGCACCGAGCGCTTCGCTAAGGCCAAGGCCATCAACTCACTGCTCC
GCCATGTCGCCGACATACTCGGCTTCGAGGGCAACGAGAAGCTGGAAGAT
CTCTACCAGAAGACCGCCTGGCACTTCGAGAAGAAGTACAACAACAAGAC
GGTCGCCTACGACATCTTCAAGCAATCGGTCACCGATCCCACCGTCTTCG
ATGAGTGCAACCTGGAACCGGAGACCAAGGAGGTCCTGTTGAGCAACATC
AAGCGGAAGCTGGTCTCGCCCACTGTCAAGATCCGTGCGGACATCGAGTG
CTCCTGCTACGGTTACGAGGGCATCGACGCTGTCAAGGCATCGCTCACCA
AGGGCCTGGAGCTGAGCACCGAGGAGCTGCCCATTCGCATCAACCTGATA
GCACCGCCACTCTATGTAATGACCACATCCACTACCAAGAAGACAGACGG
TTTAAAGGCTCTGGAGGTGGCCATTGAGCACATTCGCGCCAAGACCAGCG
AGTACGATGGAGAGTTCAAGGTGATCATGGCACCCAAACTGGTTACGGCC
ATCGACGAGGCGGATCTGGCCAGACGCCTGGAGCGCGCTGAGGCCGAGAA
CGCCCAGGTGG
BO05910.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:30:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9946-PA | 1026 | eIF-2alpha-RA | 1..895 | 17..911 | 4475 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:30:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF-2alpha-RB | 1519 | CG9946-RB | 113..1009 | 15..911 | 4485 | 100 | Plus |
eIF-2alpha-RA | 1200 | CG9946-RA | 113..1009 | 15..911 | 4485 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:30:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16446178..16446881 | 718..15 | 3490 | 99.7 | Minus |
X | 23542271 | X | 16445686..16445885 | 911..712 | 1000 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 00:30:50 has no hits.
BO05910.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:34:30 Download gff for
BO05910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9946-PA | 1..895 | 17..911 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:01:16 Download gff for
BO05910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9946-PA | 1..895 | 17..911 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:13:07 Download gff for
BO05910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-2alpha-RA | 113..1009 | 15..911 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:53:14 Download gff for
BO05910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-2alpha-RA | 113..1009 | 15..911 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:53:14 Download gff for
BO05910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16445686..16445885 | 712..911 | 100 | <- | Minus |
X | 16446185..16446881 | 15..711 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:13:07 Download gff for
BO05910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16339719..16339918 | 712..911 | 100 | <- | Minus |
arm_X | 16340218..16340914 | 15..711 | 100 | | Minus |
BO05910.complete Sequence
1057 bp (1057 high quality bases) assembled on 2005-10-19
GenBank Submission: FJ630200
> BO05910.complete
GAAGTTATCAGTCGACATGGCCCTGACGTCGCGCTTCTACAACGAGCGGT
ATCCGGAGATCGAGGATGTCGTTATGGTGAACGTGCTGTCCATCGCCGAG
ATGGGCGCCTACGTTCATCTGCTTGAGTACAACAACATCGAGGGCATGAT
CCTGCTGTCGGAGCTGTCCCGCCGGCGCATCCGCTCCATCAACAAGCTGA
TTCGTGTCGGCAAGACCGAACCGGTGGTGGTTATCCGTGTTGACAAGGAG
AAGGGCTACATCGATCTGTCGAAGCGTCGCGTTTCGCCCGAAGATGTCGA
GAAGTGCACCGAGCGCTTCGCTAAGGCCAAGGCCATCAACTCACTGCTCC
GCCATGTCGCCGACATACTCGGCTTCGAGGGCAACGAGAAGCTGGAAGAT
CTCTACCAGAAGACCGCCTGGCACTTCGAGAAGAAGTACAACAACAAGAC
GGTCGCCTACGACATCTTCAAGCAATCGGTCACCGATCCCACCGTCTTCG
ATGAGTGCAACCTGGAACCGGAGACCAAGGAGGTCCTGTTGAGCAACATC
AAGCGGAAGCTGGTCTCGCCCACTGTCAAGATCCGTGCGGACATCGAGTG
CTCCTGCTACGGTTACGAGGGCATCGACGCTGTCAAGGCATCGCTCACCA
AGGGCCTGGAGCTGAGCACCGAGGAGCTGCCCATTCGCATCAACCTGATA
GCACCGCCACTCTATGTAATGACCACATCCACTACCAAGAAGACAGACGG
TTTAAAGGCTCTGGAGGTGGCCATTGAGCACATTCGCGCCAAGACCAGCG
AGTACGATGGAGAGTTCAAGGTGATCATGGCACCCAAACTGGTTACGGCC
ATCGACGAGGCGGATCTGGCCAGACGCCTGGAGCGCGCTGAGGCCGAGAA
CGCCCAGGTGGCTGGCGACGATGACGAGGAGGATGGCGCCGACCAGGAGG
GCATGCAGTTCGATCCAGAGAAGGAGTTCAACCACAAGGGATCGGGGGCG
GGTCGTGCGAACGAGGAGGATGAGGAGGAGGAAGAGGATGCAAGCTTTCT
AGACCAT
BO05910.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:12:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF-2alpha-RB | 1026 | CG9946-PB | 1..1023 | 17..1039 | 5115 | 100 | Plus |
eIF-2alpha-RA | 1026 | CG9946-PA | 1..1023 | 17..1039 | 5115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:12:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF-2alpha-RB | 1519 | CG9946-RB | 113..1137 | 15..1039 | 5125 | 100 | Plus |
eIF-2alpha-RA | 1200 | CG9946-RA | 113..1137 | 15..1039 | 5125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:12:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16446178..16446881 | 718..15 | 3490 | 99.7 | Minus |
X | 23542271 | X | 16445558..16445885 | 1039..712 | 1640 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:12:32 has no hits.
BO05910.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:28:58 Download gff for
BO05910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-2alpha-RA | 1..1026 | 17..1040 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:55:08 Download gff for
BO05910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-2alpha-RA | 94..1122 | 15..1045 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:50:50 Download gff for
BO05910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-2alpha-RA | 115..1137 | 17..1041 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:28:58 Download gff for
BO05910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-2alpha-RA | 94..1122 | 15..1045 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:13:19 Download gff for
BO05910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-2alpha-RA | 115..1137 | 17..1041 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:13:19 Download gff for
BO05910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16445554..16445885 | 712..1041 | 99 | <- | Minus |
X | 16446185..16446879 | 17..711 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:50:50 Download gff for
BO05910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16339587..16339918 | 712..1041 | 99 | <- | Minus |
arm_X | 16340218..16340912 | 17..711 | 100 | | Minus |
BO05910.pep Sequence
Translation from 16 to 1057
> BO05910.pep
MALTSRFYNERYPEIEDVVMVNVLSIAEMGAYVHLLEYNNIEGMILLSEL
SRRRIRSINKLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSPEDVEKCTER
FAKAKAINSLLRHVADILGFEGNEKLEDLYQKTAWHFEKKYNNKTVAYDI
FKQSVTDPTVFDECNLEPETKEVLLSNIKRKLVSPTVKIRADIECSCYGY
EGIDAVKASLTKGLELSTEELPIRINLIAPPLYVMTTSTTKKTDGLKALE
VAIEHIRAKTSEYDGEFKVIMAPKLVTAIDEADLARRLERAEAENAQVAG
DDDEEDGADQEGMQFDPEKEFNHKGSGAGRANEEDEEEEEDASFLDH
BO05910.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:52:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF-2alpha-PB | 341 | CG9946-PB | 1..341 | 1..341 | 1731 | 100 | Plus |
eIF-2alpha-PA | 341 | CG9946-PA | 1..341 | 1..341 | 1731 | 100 | Plus |