Clone BO05915 Report

Search the DGRC for BO05915

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:59
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG31705-RA
Protein status:BO05915.pep: Imported from assembly
Sequenced Size:2080

Clone Sequence Records

BO05915.3prime Sequence

937 bp (853 high quality bases) assembled on 2005-12-02

> BO05915.3prime
ATGGTCTAGAAAGCTTGCGTGGAGACAGTAGGCCACGATTAGGGTCACCA
CCGTGGAGATGAAGCTAAAGTGTCCAAAAGTTCGCTCTGCCATACTATGC
GCATCCTTGACGATAGATTCCGCCGAGAGTCGAGCCTGTGTCAGACCCGG
CATCTTCATAATATCGGGCTGACCACCGGGAACTATGGGTGCCAATGGTA
CAGATCCCTCGGGAATGGCCACAGGAGTGGTCGGCTGAATGGGAGCCAGT
TGAACGGATTCGGGAGCGGAAACGGGAGGGGGTACTGCACCCTCCACGGC
TGGTGCCGTTCCATTGGCTGGAGTAGCAGTCTCCGGTGGCGGTGCTGGAT
AGCACGCGATCTGATCCAACTCAATAGTCTTGGTAGGATCTTTAGGATCC
GGACCGGGCACTTTAACGGGCACACAGATGATGCCACCACCAGGTGGTGC
ATTGGGATCAGCAGGGGCTCCAGGTGCAGGAGGGACTGGCGCGTTTGGAT
CCGCCGGATTGGGTGCAACTGCGGGTGCAGGAGCCACAGGAGATCCGGGT
GCAACAGGAGCTCCAGAAGCAGATACAGGTGCCGCTGGATCAACGGGAGC
AGGTGGCGATGGACCTAGAGGCGCCAGTGGAACTGATCCTGCAACTGGGG
CTGGAGGAACGGGTAGAGCTTGAGAGTCAGTAACAGGTGGAGCGGCATAA
ACAGGTGGCACTGGCACAGCTGGAGAAGCGGCTGCTTGGTTTCCTCCAGC
ATTTATCACCGTAGTACCCGATCCCACATCTGTGGTGGTCACAGATCCAG
GTGGTCCGTTATTGATAATGATGATTTTGTCGTCACCACCATGGGTGCCT
CCGCCTCCCCACACGCCGGGAATAGAATTGGAACTCTCCACACACGCGTG
TGGGTGGGTGTCAGTGCGTGACCCANGATGGCACACC

BO05915.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:30:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG31705-PA 2049 CG31705-RA 1207..2046 858..19 4200 100 Minus
CG31705-PB 2049 CG31705-RB 1207..2046 858..19 4200 100 Minus
CG31705-PC 2049 CG31705-RC 1207..2046 858..19 4200 100 Minus
CG31705-PA 2049 CG31705-RA 1130..1173 934..891 201 97.7 Minus
CG31705-PB 2049 CG31705-RB 1130..1173 934..891 201 97.7 Minus
CG31705-PC 2049 CG31705-RC 1130..1173 934..891 201 97.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 11:56:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG31705-RE 2664 CG31705-RE 1216..2132 934..19 4459 99.3 Minus
CG31705-RD 2477 CG31705-RD 1312..2228 934..19 4459 99.3 Minus
CG31705-RA 2381 CG31705-RA 1216..2132 934..19 4459 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 11:56:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11523553..11524469 19..934 4419 99 Plus
Blast to na_te.dros performed on 2015-02-13 11:56:21 has no hits.

BO05915.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:34:39 Download gff for BO05915.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31705-PB 1126..2049 15..937 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:01:28 Download gff for BO05915.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31705-PC 1126..2049 15..937 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:47:20 Download gff for BO05915.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31705-RA 1212..2135 15..937 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:19:29 Download gff for BO05915.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31705-RA 1212..2135 15..937 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:19:29 Download gff for BO05915.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 11523550..11524473 15..937 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:47:20 Download gff for BO05915.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11523550..11524473 15..937 99   Plus

BO05915.5prime Sequence

958 bp (875 high quality bases) assembled on 2005-12-02

> BO05915.5prime
GAAGTTATCAGTCGACATGACCACTTACCCGACGCGGTTCAGTGGCAGCC
TGCTGGTGGTGGTGCTCCTAATATTGGCCCTGACCACCGAGGATGCGCAT
GCCAAATGGAAGTCCACTGGCAGCAGAAGTCGCACCAGTTCCTCTTCTAA
CAGAAGGACCTCCTCACACAGCTACTCTGCGCCATCGCATTCAGTCCCAT
CGCACCACGCAGCTCCTGCTCCACACCATGATAATGTCAGGCTGAGCTAC
GGAGGTGGATCCCACTCGCAGCCGGTGAGCAAGGTGAGCAGCTCCCAAAC
GCACAGTGCGGCTCCTTCGGCACCCGCGTCACCAATTGGCTGGAATGTCC
CAGCAAAGCCCCAAGGACCTCCGCCGGCGTACTCAGCCTCGAATCCAGTG
GGCGGAGCTCACACCAACATACATGAGCGTCCGCCAGCCTACAACCCGGC
ATACAAGCCAGCTCCACCTAGCTATTCGGCTGCCACCCAAACGCACAGCA
ACACGAATCTCCAGAGCCCATATCGTCCAGCAGGAGCAGCCAGTCCTGGT
GCCAGTTCCAGTTCAAGTGGTTCCCACTACTATGGCGGAGCACACAACAC
AGCCTATAGAGGACGTAATAACTCCACTGGTGGATTTGGTTCCTCCGGTG
GATATCAGCCGATAACGGCCACCAATGCCCATAATGTGCAGTCCAGCTAT
CCTCGCCAACAGTTGCCAGCAGGTGCCACCTACCACCCGGCAGGTCAACT
TCCAGCCGGAGCCACCTACCACCCAGCCGGGCAAATTCCAGCCGGAGCCT
CATACCATCCGGCAGGTCAATTGCCGGCTGGTGCTTCTACCACCCAGCGG
GTCAAGTGCCCACGGAGCGACTACTACCCCACGGGTCAGGTTTCAGCCGG
TGCCAGCTACCATCCGTCGGGTGGATATCCCGCANGAGCATCTTACCATC
CAGTCGGA

BO05915.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:30:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG31705-PA 2049 CG31705-RA 1..821 17..837 4105 100 Plus
CG31705-PB 2049 CG31705-RB 1..821 17..837 4105 100 Plus
CG31705-PC 2049 CG31705-RC 1..821 17..837 4105 100 Plus
CG31705-PA 2049 CG31705-RA 858..945 871..958 396 97.7 Plus
CG31705-PB 2049 CG31705-RB 858..945 871..958 396 97.7 Plus
CG31705-PC 2049 CG31705-RC 858..945 871..958 396 97.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:06:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG31705-RE 2664 CG31705-RE 83..1031 13..958 4629 99.4 Plus
CG31705-RA 2381 CG31705-RA 83..1031 13..958 4629 99.4 Plus
CG31705-RD 2477 CG31705-RD 183..1127 17..958 4624 99.5 Plus
CG31705-RE 2664 CG31705-RE 822..931 716..825 220 80 Plus
CG31705-RA 2381 CG31705-RA 822..931 716..825 220 80 Plus
CG31705-RE 2664 CG31705-RE 786..895 752..860 195 79.1 Plus
CG31705-RA 2381 CG31705-RA 786..895 752..860 195 79.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:06:47
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11524722..11525666 958..17 4549 99.5 Minus
2L 23513712 2L 11524822..11524931 825..716 220 80 Minus
Blast to na_te.dros performed on 2015-02-12 16:06:48 has no hits.

BO05915.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:34:40 Download gff for BO05915.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31705-PB 1..944 17..957 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:01:29 Download gff for BO05915.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31705-PC 1..944 17..957 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:11:45 Download gff for BO05915.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31705-RA 77..1030 7..957 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:42:01 Download gff for BO05915.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31705-RA 77..1030 7..957 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:42:01 Download gff for BO05915.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 11524723..11525670 9..957 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:11:45 Download gff for BO05915.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11524723..11525670 9..957 99   Minus

BO05915.complete Sequence

2080 bp assembled on 2010-02-24

GenBank Submission: KX797372

> BO05915.complete
GAAGTTATCAGTCGACATGACCACTTACCCGACGCGGTTCAGTGGCAGCC
TGCTGGTGGTGGTGCTCCTAATATTGGCCCTGACCACCGAGGATGCGCAT
GCCAAATGGAAGTCCACTGGCAGCAGAAGTCGCACCAGTTCCTCTTCTAA
CAGAAGGACCTCCTCACACAGCTACTCTGCGCCATCGCATTCAGTCCCAT
CGCACCACGCAGCTCCTGCTCCACACCATGATAATGTCAGGCTGAGCTAC
GGAGGTGGATCCCACTCGCAGCCGGTGAGCAAGGTGAGCAGCTCCCAAAC
GCACAGTGCGGCTCCTTCGGCACCCGCGTCACCAATTGGCTGGAATGTCC
CAGCAAAGCCCCAAGGACCTCCGCCGGCGTACTCAGCCTCGAATCCAGTG
GGCGGAGCTCACACCAACATACATGAGCGTCCGCCAGCCTACAACCCGGC
ATACAAGCCAGCTCCACCTAGCTATTCGGCTGCCACCCAAACGCACAGCA
ACACGAATCTCCAGAGCCCATATCGTCCAGCAGGAGCAGCCAGTCCTGGT
GCCAGTTCCAGTTCAAGTGGTTCCCACTACTATGGCGGAGCACACAACAC
AGCCTATAGAGGACGTAATAACTCCACTGGTGGATTTGGTTCCTCCGGTG
GATATCAGCCGATAACGGCCACCAATGCCCATAATGTGCAGTCCAGCTAT
CCTCGCCAACAGTTGCCAGCAGGTGCCACCTACCACCCGGCAGGTCAACT
TCCAGCCGGAGCCACCTACCACCCAGCCGGGCAAATTCCAGCCGGAGCCT
CATACCATCCGGCAGGTCAATTGCCGGCTGGTGCTTCATACCACCCAGCG
GGTCAAGTGCCCCACGGAGCGACCTACTACCCCACGGGTCAGGTTCCAGC
CGGTGCCAGCTACCATCCGTCGGGTGGATATCCCGCAGGAGCATCTTACC
ATCCAGTCGGACAAGTGCCCCATGGAGCCACCTATTATCCACAAGGACCA
GTCGGCGGAGGTCTGCCCGCAGGAGCCACCTTCCTGCCCGCTGGCGGAGT
TTTGCCTGCAGGAGCTGTTTACTATCCACAGGCGCCGCAGAAGTCATCAT
CAGGCTTGGGATTGGGCACTGGTCTTATCGCTGGAGCATTGGGTGGTGCC
ATCCTGGGTCACGCACTGACACCCACCCACACGCGTGTGGTGGAGAGTTC
CAATTCTTATTCCGGCGGTGGTGGAGGCGGAGGCACCCATGGTGGTGACG
ACAAAATCATCATTATCAATAACGGACCACCTGGATCTGTGACCACCACA
GATGTGGGATCGGGTACTACGGTGATAAATGCTGGAGGAAACCAAGCAGC
CGCTTCTCCAGCTGTGCCAGTGCCACCTGTTTATGCCGCTCCACCTGTTA
CTGACTCTCAAGCTCTACCCGTTCCTCCAGCCCCAGTTGCAGGATCAGTT
CCACTGGCGCCTCTAGGTCCATCGCCACCTGCTCCCGTTGATCCAGCGGC
ACCTGTATCTGCTTCTGGAGCTCCTGTTGCACCCGGATCTCCTGTGGCTC
CTGCACCCGCAGTTGCACCCAATCCGGCGGATCCAAACGCGCCAGTCCCT
CCTGCACCTGGAGCCCCTGCTGATCCCAATGCACCACCTGGTGGTGGCAT
CATCTGTGTGCCCGTTAAAGTGCCCGGTCCGGATCCTAAAGATCCTACCA
AGACTATTGAGTTGGATCAGATCGCGTGCTATCCAGCACCGCCACCGGAG
ACTGCTACTCCAGCCAATGGAACGGCACCAGCCGTGGAGGGTGCAGTACC
CCCTCCCGTTTCCGCTCCCGAATCCGTTCAACTGGCTCCCATTCAGCCGA
CCACTCCTGTGGCCATTCCCGAGGGATCTGTACCATTGGCACCCATAGTT
CCCGGTGGTCAGCCCGATATTATGAAGATGCCGGGTCTGACACAGGCTCG
ACTCTCGGCGGAATCTATCGTCAAGGATGCGCATAGTATGGCAGAGCGAA
CTTTTGGACACTTTAGCTTCATCTCCACGGTGGTGACCCTAATCGTGGCC
TACTGTCTCCACGCAAGCTTTCTAGACCAT

BO05915.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:28:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG31705-RE 2049 CG31705-PE 1..2046 17..2062 10230 100 Plus
CG31705-RD 2049 CG31705-PD 1..2046 17..2062 10230 100 Plus
CG31705-RA 2049 CG31705-PA 1..2046 17..2062 10230 100 Plus
CG31705-RE 2049 CG31705-PE 700..809 752..861 220 80 Plus
CG31705-RE 2049 CG31705-PE 736..845 716..825 220 80 Plus
CG31705-RD 2049 CG31705-PD 700..809 752..861 220 80 Plus
CG31705-RD 2049 CG31705-PD 736..845 716..825 220 80 Plus
CG31705-RE 2049 CG31705-PE 697..860 821..984 205 75 Plus
CG31705-RE 2049 CG31705-PE 805..968 713..876 205 75 Plus
CG31705-RD 2049 CG31705-PD 697..860 821..984 205 75 Plus
CG31705-RD 2049 CG31705-PD 805..968 713..876 205 75 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:28:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG31705-RE 2664 CG31705-RE 83..2132 13..2062 10235 100 Plus
CG31705-RA 2381 CG31705-RA 83..2132 13..2062 10235 100 Plus
CG31705-RD 2477 CG31705-RD 183..2228 17..2062 10230 100 Plus
CG31705-RE 2664 CG31705-RE 786..895 752..861 220 80 Plus
CG31705-RE 2664 CG31705-RE 822..931 716..825 220 80 Plus
CG31705-RA 2381 CG31705-RA 786..895 752..861 220 80 Plus
CG31705-RA 2381 CG31705-RA 822..931 716..825 220 80 Plus
CG31705-RE 2664 CG31705-RE 783..946 821..984 205 75 Plus
CG31705-RE 2664 CG31705-RE 891..1054 713..876 205 75 Plus
CG31705-RA 2381 CG31705-RA 783..946 821..984 205 75 Plus
CG31705-RA 2381 CG31705-RA 891..1054 713..876 205 75 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:28:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11524567..11525666 1116..17 5500 100 Minus
2L 23513712 2L 11523553..11524500 2062..1115 4740 100 Minus
2L 23513712 2L 11524822..11524931 825..716 220 80 Minus
2L 23513712 2L 11524858..11524967 861..752 220 80 Minus
2L 23513712 2L 11524699..11524862 876..713 205 75 Minus
2L 23513712 2L 11524807..11524970 984..821 205 75 Minus
Blast to na_te.dros performed on 2014-11-28 04:28:54 has no hits.

BO05915.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-24 09:36:45 Download gff for BO05915.complete
Subject Subject Range Query Range Percent Splice Strand
CG31705-RA 83..2128 17..2064 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:06 Download gff for BO05915.complete
Subject Subject Range Query Range Percent Splice Strand
CG31705-RA 87..2132 17..2064 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:52 Download gff for BO05915.complete
Subject Subject Range Query Range Percent Splice Strand
CG31705-RA 87..2132 17..2064 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:52 Download gff for BO05915.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11523551..11524499 1116..2064 99 <- Minus
2L 11524568..11525666 17..1115 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:06 Download gff for BO05915.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11523551..11524499 1116..2064 99 <- Minus
arm_2L 11524568..11525666 17..1115 100   Minus

BO05915.pep Sequence

Translation from 16 to 2080

> BO05915.pep
MTTYPTRFSGSLLVVVLLILALTTEDAHAKWKSTGSRSRTSSSSNRRTSS
HSYSAPSHSVPSHHAAPAPHHDNVRLSYGGGSHSQPVSKVSSSQTHSAAP
SAPASPIGWNVPAKPQGPPPAYSASNPVGGAHTNIHERPPAYNPAYKPAP
PSYSAATQTHSNTNLQSPYRPAGAASPGASSSSSGSHYYGGAHNTAYRGR
NNSTGGFGSSGGYQPITATNAHNVQSSYPRQQLPAGATYHPAGQLPAGAT
YHPAGQIPAGASYHPAGQLPAGASYHPAGQVPHGATYYPTGQVPAGASYH
PSGGYPAGASYHPVGQVPHGATYYPQGPVGGGLPAGATFLPAGGVLPAGA
VYYPQAPQKSSSGLGLGTGLIAGALGGAILGHALTPTHTRVVESSNSYSG
GGGGGGTHGGDDKIIIINNGPPGSVTTTDVGSGTTVINAGGNQAAASPAV
PVPPVYAAPPVTDSQALPVPPAPVAGSVPLAPLGPSPPAPVDPAAPVSAS
GAPVAPGSPVAPAPAVAPNPADPNAPVPPAPGAPADPNAPPGGGIICVPV
KVPGPDPKDPTKTIELDQIACYPAPPPETATPANGTAPAVEGAVPPPVSA
PESVQLAPIQPTTPVAIPEGSVPLAPIVPGGQPDIMKMPGLTQARLSAES
IVKDAHSMAERTFGHFSFISTVVTLIVAYCLHASFLDH

BO05915.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:22:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG31705-PE 682 CG31705-PE 1..682 1..682 3650 100 Plus
CG31705-PD 682 CG31705-PD 1..682 1..682 3650 100 Plus
CG31705-PA 682 CG31705-PA 1..682 1..682 3650 100 Plus
CG5273-PB 469 CG5273-PB 25..430 159..618 514 34.8 Plus
CG5273-PC 469 CG5273-PC 25..430 159..618 514 34.8 Plus
CG5273-PB 469 CG5273-PB 36..434 32..500 384 32.8 Plus