Clone Sequence Records
BO05941.3prime Sequence
936 bp (773 high quality bases) assembled on 2005-12-02
> BO05941.3prime
ATGGTCTAGAAAGCTTGCGCCGGCATTCAGTAGTAGTTCAGCTGCCACCT
CTAAGCTCCAGTTGGTCTGCTGCAGCGCCTGTTCGCACTGTGGTCGCCCA
GCCACCCCAAGCCTCGCCAGTTGGTCGATTTTGTAGTGCCGCGTGGCTAG
TCCAACATCTCCGCTGGCCGCACGCAGTGCATTGCGCACATCCTGCTCCA
CCGCGGAGCTGCCCAGCTCTTGCATTAGCTGCTGGAGCTTCTCCTGCTCG
CGACCGTAGTCCGAGGGCACTGGCGCATACAGCTGATGGGCTCCGTCCAG
CTGCTGCTGTTGCTGCAGCCGCATCTTCTCCATCCTTCGTTGGATCTGCT
GCGCGGAGAGAGGAGGTGGCGCCAATGGAGCTGGTCGCGTTGGCCGCAGG
TAGTCATCCTGAGTCACTTCATCGTACAGAACAGCTCCACTGCCATTCGG
CACTTGGCCGTAGTATGTGGAGCCCGCCGTGCTGGCCGCCACTGCATCGT
ACAGCGAGGCGGTTGAGGAGTACGCATTGTTTTTGGGTGCCACCACTCGA
TTGGATATTGCAACAAACGAATGGTTCAACTCCTGCTGCTGCTGCTGCTG
GTGGCGATGGTTTTGGTAGATCTGCTCCTCTGCCTGCTCTGTCGGCGGCT
GGGCATAGTACTCGGACTGCGTGGACGCCACTTGCTCATACCAAATACGA
TTCACCACACTTTGCGTGGTAGCTGCCGCAGCAGCTGCTGCCTCCACATT
GTTCTGCTTGGGCGACGCGGTCGAAGAGGGACTGGAATGATTCGAGTGAA
CTGACCCGGGTGCTGCACCGTTCTTTAAGGGTGTGAGATTCTGCTTATAC
ACCATATCCTTGCTGGCATACATCTGCGTAGAATTGCGCTGGTACTCCTC
CTGCGCTCTGTTTTTGCCGTTGCTGTACATGTCCTT
BO05941.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:31:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14992-PA | 3222 | Ack-RA | 2302..3219 | 936..19 | 4540 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 11:57:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ack-RA | 4393 | CG14992-RA | 3103..4020 | 936..19 | 4560 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 11:57:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4112867..4113784 | 936..19 | 4560 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-13 11:57:19 has no hits.
BO05941.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:35:22 Download gff for
BO05941.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-PA | 2302..3222 | 15..936 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:02:26 Download gff for
BO05941.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14992-PA | 2302..3222 | 15..936 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:47:35 Download gff for
BO05941.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-RA | 3103..4023 | 15..936 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:19:52 Download gff for
BO05941.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-RA | 3103..4023 | 15..936 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:19:52 Download gff for
BO05941.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4112867..4113787 | 15..936 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:47:35 Download gff for
BO05941.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4112867..4113787 | 15..936 | 99 | | Minus |
BO05941.5prime Sequence
842 bp (815 high quality bases) assembled on 2005-12-02
> BO05941.5prime
GAAGTTATCAGTCGACATGACCTCCACTTCGGCGGTGGATGGTGGGCTCG
GGAGCGAGACGGCCTGGCTGGAGGATCTGCTGCGGGAGGTGCAGCTGGAG
CAGTTTCTGGACAGGATACGGGACGACCTACAGGTGACCCGGCTGGCGCA
CTTCGACTACGTGCTACCTGACGATCTGGAGCGATGTGGTCTGGGGAAAC
CGGCTATTCGACGGCTGATGGAGGCAGTGCGGAAAAAGAAGGCCCACCAG
TGGCGCAAGAACATCCTGTCCAAACTAATTGGCGGTGGCAAGCAACCCTC
GTCCAAGAAGCAGTCCTCCGCCGCCCGGGAATCCAGTCAGGGCAATGGCA
CCCAGCTTACCTGCCTTATCCACGAAAAGGACATCACAATGGGACTGAAA
CTGGGCGACGGATCATTCGGTGTGGTGCGTCGCGGCGAATGGAGTGCTTC
GCCGGCGGGCAAGGTCATCCCGGTGGCCGTCAAGGTGCTGAAGTCGGACA
ACCTCACCCAACCGGGCATCATCGATGACTTCTTCCGCGAGGTTCAGGCT
ATGCACGCCCTGGATCATGCGAATCTGGTGCGGCTTTACGGCGTCGTCTT
ATCCCAGCCGATGATGATGATTACAGAGCTGGCGGAGCGCGGGTCGCTGC
TGGATACGTTGCGAAAACAATGCCGCCACACCTCGCTGACCATCATCTGG
AACTGGTCGGTGCAGATTGTGACTGGCATGGCCTATCTGGAACAGAAGCG
CTTTCTACATCGCGATCTGGCATGTCGGAATGTCCTCCTGGCAGCTGGAA
ACAAGATCAAGATCGGAGATTTTGGCCTAATGCGTGCCTTGC
BO05941.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:31:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14992-PA | 3222 | Ack-RA | 1..826 | 17..842 | 4130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:47:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ack-RA | 4393 | CG14992-RA | 802..1627 | 17..842 | 4130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:46:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4110501..4111326 | 17..842 | 4130 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 15:46:59 has no hits.
BO05941.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:35:23 Download gff for
BO05941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-PA | 1..826 | 17..842 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:02:27 Download gff for
BO05941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14992-PA | 1..826 | 17..842 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:05:46 Download gff for
BO05941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-RA | 792..1627 | 7..842 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:32:55 Download gff for
BO05941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-RA | 792..1627 | 7..842 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:32:55 Download gff for
BO05941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4110494..4111326 | 8..842 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:05:46 Download gff for
BO05941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4110494..4111326 | 8..842 | 99 | | Plus |
BO05941.complete Sequence
3253 bp assembled on 2010-08-13
GenBank Submission: KX795602
> BO05941.complete
GAAGTTATCAGTCGACATGACCTCCACTTCGGCGGTGGATGGTGGGCTCG
GGAGCGAGACGGCCTGGCTGGAGGATCTGCTGCGGGAGGTGCAGCTGGAG
CAGTTTCTGGACAGGATACGGGACGACCTACAGGTGACCCGGCTGGCGCA
CTTCGACTACGTGCTACCTGACGATCTGGAGCGATGTGGTCTGGGGAAAC
CGGCTATTCGACGGCTGATGGAGGCAGTGCGGAAAAAGAAGGCCCACCAG
TGGCGCAAGAACATCCTGTCCAAACTAATTGGCGGTGGCAAGCAACCCTC
GTCCAAGAAGCAGTCCTCCGCCGCCCGGGAATCCAGTCAGGGCAATGGCA
CCCAGCTTACCTGCCTTATCCACGAAAAGGACATCACAATGGGACTGAAA
CTGGGCGACGGATCATTCGGTGTGGTGCGTCGCGGCGAATGGAGTGCTTC
GCCGGCGGGCAAGGTCATCCCGGTGGCCGTCAAGGTGCTGAAGTCGGACA
ACCTCACCCAACCGGGCATCATCGATGACTTCTTCCGCGAGGTTCAGGCT
ATGCACGCCCTGGATCATGCGAATCTGGTGCGGCTTTACGGCGTCGTCTT
ATCCCAGCCGATGATGATGATTACAGAGCTGGCGGAGCGCGGGTCGCTGC
TGGATACGTTGCGAAAACAATGCCGCCACACCTCGCTGACCATCATCTGG
AACTGGTCGGTGCAGATTGTGACTGGCATGGCCTATCTGGAACAGAAGCG
CTTTCTACATCGCGATCTGGCATGTCGGAATGTCCTCCTGGCAGCTGGAA
ACAAGATCAAGATCGGAGATTTTGGCCTAATGCGTGCCTTGCCCCAAGAG
GATGATTGCTATGTGATGTCTGAGCATAAGAAGGTGCCTTTTCCCTGGTG
CGCTCCTGAATCGCTGCGCTTCCGGCAGTTCTCGCACGCCTCTGACACCT
GGATGTTTGGCGTGACGCTGTGGGAGATGTTTAGCTTTGGCGAAGATCCA
TGGGTGGGACTCAATGGATCGCAGATCCTGCGCAAAATCGATCGCGAAGG
CGAGCGACTGCATCAGCCGGATGCCTGTCCACCGGACGTTTATGCTATGA
TGCTGCAATGCTGGGATAAAACTCCAGCAGAGCGACCCACTTTTGCTGCT
CTCAAAGAATATTTGGCCAGTATGTCGCCTCCTGTGATGCGTGCTTCCCG
AAGTCACCACGAGTCCAAGGGACTGCAGATCGAGCCTGGCGACACAATCG
CCATTATCGATGGACGGCACGAGCTGAAATTGATAAAGGGCCAGAACCAG
CGAACATTCGATATAGGAATCTTTCCCAGAAACCTACTGGAGCAGCGCAA
AGTGGGTGCTGCCGGAGATGTGGTAATGCGAAGCAGCGTTGGAAATGGTT
CGTCGTCTTCGCCATTCGGCTTTTGTTGGGGCGGAGCAGCTGCAATGGCC
AACGGAGATGATCGACAGCGAAAGTGTGCCTCGATGACAAACCAGCCCCA
TGCCAAGGAGCGCAAGTCCACGTCCAGCAAGCAGTTTGCGTACAACAAAC
TGGTTAATGATTCCGCTACTGGTCTTCAGCGACGAAATGCAGTGAAGCAC
AAAGGAGTGGTGGTGGGCCCGCAGCGTCCTCCGCCGCCACAATTTCAACA
GGAGGGCATACTCATCGACATCTCGCCCGATATGCGACCCATAGCCGAAG
CTGGAACAGGAGGAGCTAAGGGAGCAGGCGATAGTTCCTCACTGCAGGCG
GACAGCTCGTTTTGCATACTAGACGCTCCCATAGATGTGCCCACTTATGC
CGGCTCCAGTGGATCGGGGGATCTTAATGTCTCGCCCACGTACTACAATG
AGCAGCCGCAGTTCGACTTTGATCCGGCCAAGATGACAGCTTCACCAGGG
CGCCTGCAACCGCCGCCGTACCAGATGCCACCAACTTACTCGAATACAAT
GGAGTTTGTCCAAAAACGAGACCTTCACCAACAGCAGCTAGCGACGCCTG
TAAGGGAGCGAGATCCCTTCGACACCACAAACGTTGAAACGACTGTGGCA
CTCTACTCGAATTTCAACCAGTCTCTGGAAGCAGCTTCTCCACCAGCACC
GATTTATAATAGTCCTTCGGTCAGGAAGAGCCTTTTCGGTGGCTCCAAGT
CGAATAAAGAAAACATACCTGCCCTGGAATCAGCGGCTATGCAGCTAAAT
CTCAGTAATCTTACATTGGAGCGACACGACGCCACCTGCATTCAGCCAGT
GGAGCCTGTACCTGCTCCTCCTGGTGATGGAGTACTGCTGGACAAGTCCT
TCATCGCCGAACTGGAGAAGGACATGTACAGCAACGGGCAAAACAGAGCG
CAGGAGGAGTACCAGCGCAATTCTACGCAGATGTATGCCAGCAAGGATAT
GGTGTATAAGCAGAATCTCACACCCTTAAAGAACGGTGCAGCACCCGGGT
CAGTTCACTCGAATCATTCCAGTCCCTCTTCGACCGCGTCGCCCAAGCAG
AACAATGTGGAGGCAGCAGCTGCTGCGGCAGCTACCACGCAAAGTGTGGT
GAATCGTATTTGGTATGAGCAAGTGGCGTCCACGCAGTCCGAGTACTATG
CCCAGCCGCCGACAGAGCAGGCAGAGGAGCAGATCTACCAAAACCATCGC
CACCAGCAGCAGCAGCAGCAGGAGTTGAACCATTCGTTTGTTGCAATATC
CAATCGAGTGGTGGCACCCAAAAACAATGCGTACTCCTCAACCGCCTCGC
TGTACGATGCAGTGGCGGCCAGCACGGCGGGCTCCACATACTACGGCCAA
GTGCCGAATGGCAGTGGAGCTGTTCTGTACGATGAAGTGACTCAGGATGA
CTACCTGCGGCCAACGCGACCAGCTCCATTGGCGCCACCTCCTCTCTCCG
CGCAGCAGATCCAACGAAGGATGGAGAAGATGCGGCTGCAGCAACAGCAG
CAGCTGGACGGAGCCCATCAGCTGTATGCGCCAGTGCCCTCGGACTACGG
TCGCGAGCAGGAGAAGCTCCAGCAGCTAATGCAAGAGCTGGGCAGCTCCG
CGGTGGAGCAGGATGTGCGCAATGCACTGCGTGCGGCCAGCGGAGATGTT
GGACTAGCCACGCGGCACTACAAAATCGACCAACTGGCGAGGCTTGGGGT
GGCTGGGCGACCACAGTGCGAACAGGCGCTGCAGCAGACCAACTGGAGCT
TAGAGGTGGCAGCTGAACTACTACTGAATGCCGGCGCAAGCTTTCTAGAC
CAT
BO05941.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:10:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ack-RA | 3222 | CG14992-PA | 1..3219 | 17..3235 | 16095 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ack-RA | 4393 | CG14992-RA | 802..4020 | 17..3235 | 16095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:10:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4111705..4113784 | 1156..3235 | 10400 | 100 | Plus |
| 3L | 28110227 | 3L | 4110501..4111639 | 17..1155 | 5695 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:10:26 has no hits.
BO05941.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-13 10:26:01 Download gff for
BO05941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-RA | 783..4001 | 17..3237 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:47:03 Download gff for
BO05941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-RA | 802..4020 | 17..3237 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:20:00 Download gff for
BO05941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ack-RA | 802..4020 | 17..3237 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:20:00 Download gff for
BO05941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4111705..4113784 | 1156..3237 | 99 | | Plus |
| 3L | 4110501..4111639 | 17..1155 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:47:03 Download gff for
BO05941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4110501..4111639 | 17..1155 | 100 | -> | Plus |
| arm_3L | 4111705..4113784 | 1156..3237 | 99 | | Plus |
BO05941.pep Sequence
Translation from 16 to 3253
> BO05941.pep
MTSTSAVDGGLGSETAWLEDLLREVQLEQFLDRIRDDLQVTRLAHFDYVL
PDDLERCGLGKPAIRRLMEAVRKKKAHQWRKNILSKLIGGGKQPSSKKQS
SAARESSQGNGTQLTCLIHEKDITMGLKLGDGSFGVVRRGEWSASPAGKV
IPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHANLVRLYGVVLSQPMM
MITELAERGSLLDTLRKQCRHTSLTIIWNWSVQIVTGMAYLEQKRFLHRD
LACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESL
RFRQFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQ
PDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASMSPPVMRASRSHHES
KGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRNLLEQRKVGAAG
DVVMRSSVGNGSSSSPFGFCWGGAAAMANGDDRQRKCASMTNQPHAKERK
STSSKQFAYNKLVNDSATGLQRRNAVKHKGVVVGPQRPPPPQFQQEGILI
DISPDMRPIAEAGTGGAKGAGDSSSLQADSSFCILDAPIDVPTYAGSSGS
GDLNVSPTYYNEQPQFDFDPAKMTASPGRLQPPPYQMPPTYSNTMEFVQK
RDLHQQQLATPVRERDPFDTTNVETTVALYSNFNQSLEAASPPAPIYNSP
SVRKSLFGGSKSNKENIPALESAAMQLNLSNLTLERHDATCIQPVEPVPA
PPGDGVLLDKSFIAELEKDMYSNGQNRAQEEYQRNSTQMYASKDMVYKQN
LTPLKNGAAPGSVHSNHSSPSSTASPKQNNVEAAAAAAATTQSVVNRIWY
EQVASTQSEYYAQPPTEQAEEQIYQNHRHQQQQQQELNHSFVAISNRVVA
PKNNAYSSTASLYDAVAASTAGSTYYGQVPNGSGAVLYDEVTQDDYLRPT
RPAPLAPPPLSAQQIQRRMEKMRLQQQQQLDGAHQLYAPVPSDYGREQEK
LQQLMQELGSSAVEQDVRNALRAASGDVGLATRHYKIDQLARLGVAGRPQ
CEQALQQTNWSLEVAAELLLNAGASFLDH
BO05941.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:52:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ack-PA | 1073 | CG14992-PA | 1..1073 | 1..1073 | 5590 | 100 | Plus |
| Ack-like-PA | 1337 | CG43741-PA | 8..430 | 18..415 | 685 | 37.9 | Plus |
| Ack-like-PD | 1338 | CG43741-PD | 8..430 | 18..415 | 685 | 37.9 | Plus |
| Ack-like-PC | 1475 | CG43741-PC | 8..430 | 18..415 | 685 | 37.9 | Plus |
| Ack-like-PE | 1495 | CG43741-PE | 8..430 | 18..415 | 685 | 37.9 | Plus |
