Clone Sequence Records
BO05992.3prime Sequence
950 bp (793 high quality bases) assembled on 2005-12-02
> BO05992.3prime
ATGGTCTAGAAAGCTTGCGAACTGGTTCGCGGGCAAATAATGATTGCCGA
TGGGACCGACGCCAGAGTTTCCGGCACCGTTCTCCGCAAATTGTCCCTCT
GAATGTTGCTGCTGTTGCTGTTCCTCCTCCTCCTCCTCTGGAGGATCCAG
GGATCCCACCACCGAGGTGATGGGGGCCACACCCTCGTCGGTGATGGTCG
AACTTCCTCCCAAAGTATCGTACTGTGACTGAATCTGCCGCTGGGCATTC
AGAGCTTCCTCTGGAGTGCGGTACTTGATGAAGAACACCTCCGGCTTATT
GATGTGCTGTGGCGCCTCGGCAATGGCATCCTGCAGATCGGAGGCGGTCG
TCTTCTTGGCCAGCACATAGACCACGGTCTTCTCCTGCTTAAGGGTCTTG
GCCAAGTTAAGAGCCGCCGCGCGATTGGTCTGAGCCGGCGTCTTGACGAA
CAGCACATTGTAGTGGTTACGGGGCTGCTGGGCCAACTGGTTCAGCTCGT
CCTGGACCTCATCCTCAGACTCCTCGGGCGCCGAGTGGATGAAAAAGTTT
TTGGTCACAATGGGACGCTTGGGAATCCTGACACGCGGACGAGCGCGTCG
CTGCTGCTGGATGGGAGCGGTCTGGAAATTGACGGGGAAGCCGGCGGGCA
TGGGAAACGATCCGGCTGTGGGACGAACTGCAGGCTGGGCAGAATGGAAC
TGGCCAGCGGGCGGGAGGTAGGGCAGTGGGAGAGGTGGAAGCACCGGGTG
CGAGGATTGCTGGGGCTGGAGCTGCTGCTGCTGCTGCAGTTGCTGGTTCA
ACAGGTGGGCCACAATGGGCGGTTGCTGTTGCTGCTGCTGCTGTTGGATG
CGGTAGTTGTAACCCGCCTGGGTCAAGCTGATGTCAGCCTGGCTGAGGCT
CAGGCACATGGCGCCCATCAGAACCGTCACAAATATCTTCATGTCGACTG
BO05992.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:32:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4060-PA | 927 | CG4060-RA | 1..924 | 942..19 | 4620 | 100 | Minus |
| CG32570-PA | 744 | CG32570-RA | 490..516 | 297..271 | 135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:14:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlW-RA | 1126 | CG4060-RA | 92..1016 | 943..19 | 4625 | 100 | Minus |
| TwdlQ-RA | 893 | CG14250-RA | 554..679 | 297..172 | 180 | 77.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:14:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17141318..17142227 | 19..928 | 4550 | 100 | Plus |
Blast to na_te.dros performed 2015-02-11 22:14:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6754..6869 | 860..747 | 206 | 65.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6791..6892 | 859..757 | 197 | 67 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6704..6820 | 870..757 | 190 | 65 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6870 | 860..727 | 184 | 63.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2391..2526 | 859..726 | 179 | 62 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2405 | 856..757 | 173 | 65 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1079..1161 | 846..758 | 161 | 68.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2439..2560 | 859..738 | 159 | 61 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2337..2430 | 859..765 | 157 | 64.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2364..2455 | 846..758 | 155 | 66.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..2888 | 859..757 | 152 | 62.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6808..6946 | 860..727 | 151 | 59.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6826..6920 | 860..771 | 147 | 66.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2758..2869 | 860..758 | 141 | 65.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2590..2682 | 845..755 | 135 | 64.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6857..6893 | 859..822 | 124 | 84.2 | Minus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 940..999 | 883..822 | 124 | 71 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1542..1581 | 859..819 | 121 | 80.5 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1108..1148 | 863..822 | 117 | 78.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 5636..5673 | 860..822 | 111 | 79.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6768 | 154..104 | 111 | 68.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6824..6861 | 141..104 | 109 | 76.3 | Minus |
BO05992.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:36:48 Download gff for
BO05992.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4060-PA | 1..927 | 15..942 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:04:26 Download gff for
BO05992.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4060-PA | 1..927 | 15..942 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:40:27 Download gff for
BO05992.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlW-RA | 86..1026 | 8..950 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:00:57 Download gff for
BO05992.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlW-RA | 86..1026 | 8..950 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:00:57 Download gff for
BO05992.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17141308..17142226 | 8..927 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:40:27 Download gff for
BO05992.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12967030..12967948 | 8..927 | 99 | <- | Plus |
BO05992.5prime Sequence
924 bp (771 high quality bases) assembled on 2005-12-02
> BO05992.5prime
GAAGTTATCAGTCGACATGAAGATATTTGTGACGGTTCTGATGGGCGCCA
TGTGCCTGAGCCTCAGCCAGGCTGACATCAGCTTGACCCAGGCGGGTTAC
AACTACCGCATCCAACAGCAGCAGCAGCAACAGCAACCGCCCATTGTGGC
CCACCTGTTGAACCAGCAACTGCAGCAGCAGCAGCAGCTCCAGCCCCAGC
AATCCTCGCACCCGGTGCTTCCACCTCTCCCACTGCCCTACCTCCCGCCC
GCTGGCCAGTTCCATTCTGCCCAGCCTGCAGTTCGTCCCACAGCCGGATC
GTTTCCCATGCCCGCCGGCTTCCCCGTCAATTTCCAGACCGCTCCCATCC
AGCAGCAGCGACGCGCTCGTCCGCGTGTCAGGATTCCCAAGCGTCCCATT
GTGACCAAAAACTTTTTCATCCACTCGGCGCCCGAGGAGTCTGAGGATGA
GGTCCAGGACGAGCTGAACCAGTTGGCCCAGCAGCCCCGTAACCACTACA
ATGTGCTGTTCGTCAAGACGCCGGCTCAGACCAATCGCGCGGCGGCTCTT
AACTTGGCCAAGACCCTTAAGCAGGAGAAGACCGTGGTCTATGTGCTGGC
CAAGAAGACGACCGCCTCCGATCTGCAGGATGCCATTGCCGAGGCGCCAC
AGCACATCAATAAGCCGGAGGTGTTCTTCATCAAGTACCGCACTCCAGAG
GAAGCTCTGAATGCCCAGCGGCAGATTCAGTCACAGTACGATACTTTGGG
AGGAAGTTCGACCATCACCGACGAGGGTGTGGCCCCCATCACCTCGGTGG
TGGGATCCCTGGATCCTCCAGAGGAGGAGGAGGAAGAACAGCAACAGCAG
CAACATTCAGAGGGACAATTTGCGGAGAACGGTGCCGGAAACTCTGGCGT
CGGTCCCATCGGCAATCATTATTT
BO05992.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:32:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4060-PA | 927 | CG4060-RA | 1..908 | 17..924 | 4515 | 99.8 | Plus |
| CG32570-PA | 744 | CG32570-RA | 490..516 | 662..688 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:00:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlW-RA | 1126 | CG4060-RA | 92..1000 | 16..924 | 4530 | 99.9 | Plus |
| TwdlQ-RA | 893 | CG14250-RA | 554..679 | 662..787 | 180 | 77.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:00:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17141334..17142227 | 924..31 | 4455 | 99.9 | Minus |
Blast to na_te.dros performed 2015-02-13 06:00:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6754..6869 | 99..212 | 206 | 65.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6791..6892 | 100..202 | 197 | 67 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6704..6820 | 89..202 | 190 | 65 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6870 | 99..232 | 184 | 63.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2391..2526 | 100..233 | 179 | 62 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2405 | 103..202 | 173 | 65 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1079..1161 | 113..201 | 161 | 68.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2439..2560 | 100..221 | 159 | 61 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2337..2430 | 100..194 | 157 | 64.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2364..2455 | 113..201 | 155 | 66.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..2888 | 100..202 | 152 | 62.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6808..6946 | 99..232 | 151 | 59.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6826..6920 | 99..188 | 147 | 66.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2758..2869 | 99..201 | 141 | 65.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2590..2682 | 114..204 | 135 | 64.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6857..6893 | 100..137 | 124 | 84.2 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 940..999 | 76..137 | 124 | 71 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1542..1581 | 100..140 | 121 | 80.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6824..6861 | 818..855 | 118 | 78.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1108..1148 | 96..137 | 117 | 78.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 5636..5673 | 99..137 | 111 | 79.5 | Plus |
BO05992.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:36:49 Download gff for
BO05992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4060-PA | 1..908 | 17..924 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:04:28 Download gff for
BO05992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4060-PA | 1..908 | 17..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:58:24 Download gff for
BO05992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlW-RA | 92..1000 | 16..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:08:31 Download gff for
BO05992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlW-RA | 92..1000 | 16..924 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:08:31 Download gff for
BO05992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17141334..17142226 | 32..924 | 99 | <- | Minus |
| 3R | 17142298..17142313 | 16..31 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:58:24 Download gff for
BO05992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12967056..12967948 | 32..924 | 99 | <- | Minus |
| arm_3R | 12968020..12968035 | 16..31 | 100 | | Minus |
BO05992.complete Sequence
958 bp (958 high quality bases) assembled on 2005-10-19
GenBank Submission: FJ630212
> BO05992.complete
GAAGTTATCAGTCGACATGAAGATATTTGTGACGGTTCTGATGGGCGCCA
TGTGCCTGAGCCTCAGCCAGGCTGACATCAGCTTGACCCAGGCGGGTTAC
AACTACCGCATCCAACAGCAGCAGCAGCAACAGCAACCGCCCATTGTGGC
CCACCTGTTGAACCAGCAACTGCAGCAGCAGCAGCAGCTCCAGCCCCAGC
AATCCTCGCACCCGGTGCTTCCACCTCTCCCACTGCCCTACCTCCCGCCC
GCTGGCCAGTTCCATTCTGCCCAGCCTGCAGTTCGTCCCACAGCCGGATC
GTTTCCCATGCCCGCCGGCTTCCCCGTCAATTTCCAGACCGCTCCCATCC
AGCAGCAGCGACGCGCTCGTCCGCGTGTCAGGATTCCCAAGCGTCCCATT
GTGACCAAAAACTTTTTCATCCACTCGGCGCCCGAGGAGTCTGAGGATGA
GGTCCAGGACGAGCTGAACCAGTTGGCCCAGCAGCCCCGTAACCACTACA
ATGTGCTGTTCGTCAAGACGCCGGCTCAGACCAATCGCGCGGCGGCTCTT
AACTTGGCCAAGACCCTTAAGCAGGAGAAGACCGTGGTCTATGTGCTGGC
CAAGAAGACGACCGCCTCCGATCTGCAGGATGCCATTGCCGAGGCGCCAC
AGCACATCAATAAGCCGGAGGTGTTCTTCATCAAGTACCGCACTCCAGAG
GAAGCTCTGAATGCCCAGCGGCAGATTCAGTCACAGTACGATACTTTGGG
AGGAAGTTCGACCATCACCGACGAGGGTGTGGCCCCCATCACCTCGGTGG
TGGGATCCCTGGATCCTCCAGAGGAGGAGGAGGAGGAACAGCAACAGCAG
CAACATTCAGAGGGACAATTTGCGGAGAACGGTGCCGGAAACTCTGGCGT
CGGTCCCATCGGCAATCATTATTTGCCCGCGAACCAGTTCGCAAGCTTTC
TAGACCAT
BO05992.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:36:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlW-RA | 927 | CG4060-PA | 1..924 | 17..940 | 4620 | 100 | Plus |
| TwdlQ-RA | 738 | CG14250-PA | 487..612 | 662..787 | 180 | 76.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:36:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlW-RA | 1126 | CG4060-RA | 92..1016 | 16..940 | 4625 | 100 | Plus |
| TwdlQ-RA | 893 | CG14250-RA | 554..679 | 662..787 | 180 | 76.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:36:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17141318..17142227 | 940..31 | 4550 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 14:36:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6754..6869 | 99..212 | 206 | 65.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6791..6892 | 100..202 | 197 | 67 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6704..6820 | 89..202 | 190 | 65 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6870 | 99..232 | 184 | 63.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2391..2526 | 100..233 | 179 | 62 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2405 | 103..202 | 173 | 65 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1079..1161 | 113..201 | 161 | 68.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2439..2560 | 100..221 | 159 | 61 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2337..2430 | 100..194 | 157 | 64.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2364..2455 | 113..201 | 155 | 66.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..2888 | 100..202 | 152 | 62.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6808..6946 | 99..232 | 151 | 59.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6826..6920 | 99..188 | 147 | 66.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2758..2869 | 99..201 | 141 | 65.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2590..2682 | 114..204 | 135 | 64.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6857..6893 | 100..137 | 124 | 84.2 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 940..999 | 76..137 | 124 | 71 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1542..1581 | 100..140 | 121 | 80.5 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1108..1148 | 96..137 | 117 | 78.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 5636..5673 | 99..137 | 111 | 79.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6768 | 805..855 | 111 | 68.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6824..6861 | 818..855 | 109 | 76.3 | Plus |
BO05992.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 22:28:27 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:54:17 Download gff for
BO05992.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlW-RA | 86..1020 | 16..951 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:33 Download gff for
BO05992.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlW-RA | 93..1016 | 17..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 22:28:27 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:15:07 Download gff for
BO05992.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlW-RA | 93..1016 | 17..942 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:15:07 Download gff for
BO05992.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17141316..17142226 | 32..942 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:33 Download gff for
BO05992.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12967038..12967948 | 32..942 | 99 | <- | Minus |
BO05992.pep Sequence
Translation from 16 to 958
> BO05992.pep
MKIFVTVLMGAMCLSLSQADISLTQAGYNYRIQQQQQQQQPPIVAHLLNQ
QLQQQQQLQPQQSSHPVLPPLPLPYLPPAGQFHSAQPAVRPTAGSFPMPA
GFPVNFQTAPIQQQRRARPRVRIPKRPIVTKNFFIHSAPEESEDEVQDEL
NQLAQQPRNHYNVLFVKTPAQTNRAAALNLAKTLKQEKTVVYVLAKKTTA
SDLQDAIAEAPQHINKPEVFFIKYRTPEEALNAQRQIQSQYDTLGGSSTI
TDEGVAPITSVVGSLDPPEEEEEEQQQQQHSEGQFAENGAGNSGVGPIGN
HYLPANQFASFLDH
BO05992.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:39:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlW-PA | 308 | CG4060-PA | 1..308 | 1..308 | 1590 | 100 | Plus |
| TwdlV-PA | 251 | CG14640-PA | 51..250 | 89..306 | 376 | 42.5 | Plus |
| TwdlG-PC | 278 | CG14643-PC | 19..275 | 27..306 | 371 | 35.5 | Plus |
| TwdlG-PB | 278 | CG14643-PB | 19..275 | 27..306 | 371 | 35.5 | Plus |
| TwdlG-PA | 278 | CG14643-PA | 19..275 | 27..306 | 371 | 35.5 | Plus |
