Clone BO06014 Report

Search the DGRC for BO06014

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:60
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptMESR6-RA
Protein status:BO06014.pep: validated full length
Sequenced Size:1444

Clone Sequence Records

BO06014.3prime Sequence

923 bp (723 high quality bases) assembled on 2005-12-02

> BO06014.3prime
ATGGTCTAGAAAGCTTGCGAGCTTCATCACATCCCAAGGATCGTCCATAT
AGTGCAGGATGGCTTTGTCGTGCAGTCTTTCGCCAAAAACCTCCTTAAGC
AGGCGTAGAACGCATTCCTCAATGAATGCCACCTGATCCTGGGGGCAGTA
GTCATCTTGAGCGGAATGGGCCATTGTAATGGCCACTGGAGGAACTGGCA
GGCGCTGTAAGAAACGCTTGAAGTTTGCAAAGTACGTTTCCAACTCTTCG
GCGATGCTGATGTGGTGGGGCAAGCCATTATTATCGGTGGTGCTGCCCGA
ATCGAAGATCAAATGCCAGTCGATTTCATCGTCTGGATATTTCTCCTGCA
GCTGATCGGCCAGTTTCACAATCTTGGCGTACACTTCGGGCGTGACCACG
GTCTCGTCCGGCTTTTCCAGTCCCTCGAAATTGCGCTCCTCCTCCAGATG
CCAGAAAATCGTCTTCAGTGCATCCAACTGAGTCTGTCGCCTCTCTGCCG
TGGCCAAATAATCTGCTATAGTAGCCGTGCCCGACTTCTTCACCTTCTCC
ACGCTTTCGAAGTGGAAGATCTCCTTTAGCTGATTGTAGCAATCGGCATC
CTTGTATATTTCCAAGAAGGGGTTGGAGGTGCTGAAAAAGTCGAGGTCTA
TGTCCAGCACGAATCCCTTGGCGTCCTTCTCCGTTAGGAATTCGTTCGGA
TTGAGGCTTTCGTTGTCTGCATCGTGAACCTGCAGCTCCACGCTCTTGGC
ATCCTGCAGATCCTCCGTAGTGCAGTAGTTGCCGTCGGCAATAAAGTAGT
CCAACGGACAGTCCACTCCAATGCGATCGTCCTTTTGTCAACCTTAAAGT
CGTGCCTGCCAGTGGGCAGCTGCTGGCACATGAGTTCTTCAGCCACACGA
CGCGGTTTGAATGTCCTGCATAA

BO06014.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:32:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG6818-PA 1413 MESR6-RA 590..1410 839..19 4105 100 Minus
CG6818-PA 1413 MESR6-RA 549..589 879..839 205 100 Minus
CG6818-PA 1413 MESR6-RA 504..548 923..879 175 95.5 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:03:03
Subject Length Description Subject Range Query Range Score Percent Strand
MESR6-RA 1749 CG6818-RA 644..1550 923..19 4455 99.6 Minus
MESR6-RB 1791 CG6818-RB 693..1592 916..19 4420 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:02:58
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19093661..19094561 917..19 4375 99.6 Minus
Blast to na_te.dros performed on 2015-02-10 15:03:01 has no hits.

BO06014.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:37:20 Download gff for BO06014.3prime
Subject Subject Range Query Range Percent Splice Strand
MESR6-PA 506..1413 15..921 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:05:15 Download gff for BO06014.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6818-PA 506..1413 15..921 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 05:57:28 Download gff for BO06014.3prime
Subject Subject Range Query Range Percent Splice Strand
MESR6-RA 644..1562 5..923 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:07:14 Download gff for BO06014.3prime
Subject Subject Range Query Range Percent Splice Strand
MESR6-RA 644..1562 5..923 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:07:14 Download gff for BO06014.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 19093661..19094573 5..917 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 05:57:28 Download gff for BO06014.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19086761..19087673 5..917 99   Minus

BO06014.5prime Sequence

872 bp (725 high quality bases) assembled on 2005-12-02

> BO06014.5prime
GAAGTTATCAGTCGACATGGAATCGGATACGCTGGACCAGGAGAGTGCCG
CGGCTGCTCTAAAAAAACTATCGCCAAGTGAAAGTCCCGAAAGTTCGAAG
AAATGGGAGCCGACTTCGGGAGAGTGGGTTGCGGCGGGTGGGGGAGAAGA
GGCGCCGCCAACAAAGAGACAAAAGACTGCAGACGAAAAGGAGGAGAATC
GGGAGGAAGACGAGGATAGCGAGGAGAGCGTTGATGAGGAGGAGGATGAT
GGCGAGGGCATCGTCCAGATTGGCGGCACCATCAGCCCAAGGCATTTCCA
GCGCATCCCCGTCTTTATCGTCGACTACCACAACGATGTGCTGGAGTTCA
TCTACCGCTGCTTTGCCACCCGCCACCTTCCGCTGCAGAACAACACCCTT
GTCCACTTCGACTCGCATCCGGATCTGGTCATTCCACGGCACATTGCCGC
CAGTTCCACCTACCAAAAGGAAACCATGTTAAATGAGCTTAGCATCGAGA
ACTGGATCATGCCCACACTTTATGCAGGACATTTCAACCGCGTCGTGTGG
CTGAAGAACTCATGGTGCCAGCAGCTGCCCACTGGCAGGCACGACTTTAA
GGTTGGACAAAAGGACGATCGCATTGGAGTGGACTGTCCGTTGGACTACT
TTATTGCCGACGGCAACTACTGCACTACGGAGGATCTGCAGGATGCCAAG
AGCGTGGAGCTGCAGGTTCACGATGCAGACAACGAAAGCCTCAATCCGAA
CGAATTCCTAACGGAGAAGGACGCCAAGGGATTCGTGCTGGACATAGACC
TCGACTTTTTCAGCACCTCCAACCCCTTTCTTGGAATATACAGGGATGCC
GATTGCTACAATCAGCTAAAGG

BO06014.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:32:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG6818-PA 1413 MESR6-RA 1..812 17..828 4060 100 Plus
CG6818-PA 1413 MESR6-RA 819..856 835..872 165 97.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:49:04
Subject Length Description Subject Range Query Range Score Percent Strand
MESR6-RA 1749 CG6818-RA 141..996 17..872 4220 99.6 Plus
MESR6-RB 1791 CG6818-RB 141..651 17..527 2555 100 Plus
MESR6-RB 1791 CG6818-RB 693..1038 527..872 1670 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:49:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19092810..19093321 17..528 2560 100 Plus
3L 28110227 3L 19093661..19094007 526..872 1660 98.6 Plus
Blast to na_te.dros performed on 2015-02-13 15:49:03 has no hits.

BO06014.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:37:22 Download gff for BO06014.5prime
Subject Subject Range Query Range Percent Splice Strand
MESR6-PA 1..856 17..872 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:05:16 Download gff for BO06014.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6818-PA 1..856 17..872 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:06:01 Download gff for BO06014.5prime
Subject Subject Range Query Range Percent Splice Strand
MESR6-RA 135..996 10..872 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:11:12 Download gff for BO06014.5prime
Subject Subject Range Query Range Percent Splice Strand
MESR6-RA 135..996 10..872 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:11:12 Download gff for BO06014.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 19092804..19093320 10..527 99 -> Plus
3L 19093663..19094007 528..872 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:06:01 Download gff for BO06014.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19085904..19086420 10..527 99 -> Plus
arm_3L 19086763..19087107 528..872 99   Plus

BO06014.complete Sequence

1444 bp (1444 high quality bases) assembled on 2005-10-20

GenBank Submission: FJ630226

> BO06014.complete
GAAGTTATCAGTCGACATGGAATCGGATACGCTGGACCAGGAGAGTGCCG
CGGCTGCTCTAAAAAAACTATCGCCAAGTGAAAGTCCCGAAAGTTCGAAG
AAATGGGAGCCGACTTCGGGAGAGTGGGTTGCGGCGGGTGGGGGAGAAGA
GGCGCCGCCAACAAAGAGACAAAAGACTGCAGACGAAAAGGAGGAGAATC
GGGAGGAAGACGAGGATAGCGAGGAGAGCGTTGATGAGGAGGAGGATGAT
GGCGAGGGCATCGTCCAGATTGGCGGCACCATCAGCCCAAGGCATTTCCA
GCGCATCCCCGTCTTTATCGTCGACTACCACAACGATGTGCTGGAGTTCA
TCTACCGCTGCTTTGCCACCCGCCACCTTCCGCTGCAGAACAACACCCTT
GTCCACTTCGACTCGCATCCGGATCTGGTCATTCCACGGCACATTGCCGC
CAGTTCCACCTACCAAAAGGAAACCATGTTAAATGAGCTTAGCATCGAGA
ACTGGATCATGCCCACACTTTATGCAGGACATTTCAACCGCGTCGTGTGG
CTGAAGAACTCATGGTGCCAGCAGCTGCCCACTGGCAGGCACGACTTTAA
GGTTGGACAAAAGGACGATCGCATTGGAGTGGACTGTCCGTTGGACTACT
TTATTGCCGACGGCAACTACTGCACTACGGAGGATCTGCAGGATGCCAAG
AGCGTGGAGCTGCAGGTTCACGATGCAGACAACGAAAGCCTCAATCCGAA
CGAATTCCTAACGGAGAAGGACGCCAAGGGATTCGTGCTGGACATAGACC
TCGACTTTTTCAGCACCTCCAACCCCTTCTTGGAAATATACAAGGATGCC
GATTGCTACAATCAGCTAAAGGAGATCTTCCACTTCGAAAGCGTGGAGAA
GGTGAAGAAGTCGGGCACGGCTACTATAGCAGATTATTTGGCCACGGCAG
AGAGGCGACAGACTCAGTTGGATGCACTGAAGACGATTTTCTGGCATCTG
GAGGAGGAGCGCAATTTCGAGGGACTGGAAAAGCCGGACGAGACCGTGGT
CACGCCCGAAGTGTACGCCAAGATTGTGAAACTGGCCGATCAGCTGCAGG
AGAAATATCCAGACGATGAAATCGACTGGCATTTGATCTTCGATTCGGGC
AGCACCACCGATAATAATGGCTTGCCCCACCACATCAGCATCGCCGAAGA
GTTGGAAACGTACTTTGCAAACTTCAAGCGTTTCTTACAGCGCCTGCCAG
TTCCTCCAGTGGCCATTACAATGGCCCATTCCGCTCAAGATGACTACTGC
CCCCAGGATCAGGTGGCATTCATTGAGGAATGCGTTCTACGCCTGCTTAA
GGAGGTTTTTGGCGAAAGACTGCACGACAAAGCCATCCTGCACTATATGG
ACGATCCTTGGGATGTGATGAAGCTCGCAAGCTTTCTAGACCAT

BO06014.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:12:16
Subject Length Description Subject Range Query Range Score Percent Strand
MESR6-RA 1413 CG6818-PA 1..1410 17..1426 7050 100 Plus
MESR6-RB 1455 CG6818-PB 553..1452 527..1426 4500 100 Plus
MESR6-RB 1455 CG6818-PB 1..511 17..527 2555 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:12:18
Subject Length Description Subject Range Query Range Score Percent Strand
MESR6-RA 1749 CG6818-RA 141..1550 17..1426 7050 100 Plus
MESR6-RB 1791 CG6818-RB 693..1592 527..1426 4500 100 Plus
MESR6-RB 1791 CG6818-RB 141..651 17..527 2555 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:12:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19093661..19094561 526..1426 4505 100 Plus
3L 28110227 3L 19092810..19093321 17..528 2560 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:12:16 has no hits.

BO06014.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:27:50 Download gff for BO06014.complete
Subject Subject Range Query Range Percent Splice Strand
MESR6-RA 1..1413 17..1430 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:53:26 Download gff for BO06014.complete
Subject Subject Range Query Range Percent Splice Strand
MESR6-RA 133..1560 10..1440 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:54:38 Download gff for BO06014.complete
Subject Subject Range Query Range Percent Splice Strand
MESR6-RA 141..1550 17..1428 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:27:50 Download gff for BO06014.complete
Subject Subject Range Query Range Percent Splice Strand
MESR6-RA 133..1560 10..1440 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:13:12 Download gff for BO06014.complete
Subject Subject Range Query Range Percent Splice Strand
MESR6-RA 141..1550 17..1428 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:13:12 Download gff for BO06014.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19092810..19093320 17..527 100 -> Plus
3L 19093663..19094561 528..1428 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:54:38 Download gff for BO06014.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19085910..19086420 17..527 100 -> Plus
arm_3L 19086763..19087661 528..1428 99   Plus

BO06014.pep Sequence

Translation from 16 to 1444

> BO06014.pep
MESDTLDQESAAAALKKLSPSESPESSKKWEPTSGEWVAAGGGEEAPPTK
RQKTADEKEENREEDEDSEESVDEEEDDGEGIVQIGGTISPRHFQRIPVF
IVDYHNDVLEFIYRCFATRHLPLQNNTLVHFDSHPDLVIPRHIAASSTYQ
KETMLNELSIENWIMPTLYAGHFNRVVWLKNSWCQQLPTGRHDFKVGQKD
DRIGVDCPLDYFIADGNYCTTEDLQDAKSVELQVHDADNESLNPNEFLTE
KDAKGFVLDIDLDFFSTSNPFLEIYKDADCYNQLKEIFHFESVEKVKKSG
TATIADYLATAERRQTQLDALKTIFWHLEEERNFEGLEKPDETVVTPEVY
AKIVKLADQLQEKYPDDEIDWHLIFDSGSTTDNNGLPHHISIAEELETYF
ANFKRFLQRLPVPPVAITMAHSAQDDYCPQDQVAFIEECVLRLLKEVFGE
RLHDKAILHYMDDPWDVMKLASFLDH

BO06014.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:43:31
Subject Length Description Subject Range Query Range Score Percent Strand
MESR6-PA 470 CG6818-PA 1..470 1..470 2508 100 Plus
MESR6-PB 484 CG6818-PB 1..484 1..470 2483 97.1 Plus