Clone BO06025 Report

Search the DGRC for BO06025

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:60
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG5315-RA
Protein status:BO06025.pep: validated full length
Sequenced Size:1366

Clone Sequence Records

BO06025.3prime Sequence

923 bp (832 high quality bases) assembled on 2005-12-02

> BO06025.3prime
ATGGTCTAGAAAGCTTGCAAAGGTTATTGGTTCGATGGGAACAGTGCATT
CGCTATACATGACGCGGTACATGGCCATTTCAGAGATGCCATGGTAGTGG
ACAAAAGCGGCCGCAATGACCAGTATGTGGAATATTTGATGTGATTGACC
CCAAATGTCAAACTTTCCAGGGAACCAGCGTTCGGGAACACGGAGGGCGT
ACAGCAGTGCGCCCAGAATGTAGAGGAGGCCCATCAGAATTAGCCATCCC
AGACTGGCGCGGCTCATCTGGCTGAACCAGCCCTCCATGATGCTGTAGTG
AATAGCTGGAATCACACCCGACAGGCCAAAGCTCATAAATACGCCAGCGC
GCAAGGGACGAAGTGCCGGCTCCGAAAACTTGTCCCATAGCGAGACCACG
ATGGAGAGGATGCCCAGAATGCTAACAACGGATAGGTATATCACCTTTGG
CTGGTAATGACAGTAGAAGCCATAGTACAGCCAAGGCACAAAGGAACCCA
TGATCAGCAGCGCAATTCCACAGTAGTCAAGTTTAGAAAACAGTCTTCCC
ATCTCTACAGAATGACAGCTCAGTGTGTGAAAAGCGAATGAGAATCCTAG
GCACACAATCGCACCGATAAAGAAGGCGCCAAAAACGATCTTCTCCTGTG
TCTGGATCTCAACCGAGGGACGCGAGATGAAGTATAATGCCACGCCGATG
AAGGCGATGCAGCCAAGAAGATGTGTCCAGATGTTGCCCGTTTCCGTGTG
CACGCGGAAAATTGATTTAAAGCACGCACGGAAAGAGGGGAGCGGTGGGC
GATGGCCGCGGTGTAGGAAGTCGTTATCCTGCAGCCACTTGGGTAGATTT
TTGTAGTGGCACACTTTCCAGCTAGCCTCCCAGACCTTGCGCACAAACTC
CTCTGCCTGCTCGGCGGCATTGT

BO06025.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:33:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG5315-PC 1335 CG5315-RC 428..1332 923..19 4525 100 Minus
CG5315-PB 1089 CG5315-RB 182..1086 923..19 4525 100 Minus
CG5315-PA 1335 CG5315-RA 428..1332 923..19 4525 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:57:31
Subject Length Description Subject Range Query Range Score Percent Strand
AdipoR-RE 1869 CG5315-RE 656..1560 923..19 4525 100 Minus
AdipoR-RD 1875 CG5315-RD 662..1566 923..19 4525 100 Minus
AdipoR-RA 2299 CG5315-RA 662..1566 923..19 4525 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:57:28
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22545118..22545472 533..887 1775 100 Plus
3R 32079331 3R 22544757..22545059 230..532 1515 100 Plus
3R 32079331 3R 22544426..22544558 19..151 665 100 Plus
3R 32079331 3R 22544614..22544695 150..231 410 100 Plus
3R 32079331 3R 22545683..22545722 884..923 200 100 Plus
Blast to na_te.dros performed 2015-02-11 04:57:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\BuT6 387 Dbuz\BuT6 BUT6 387bp 152..188 514..478 113 78.4 Minus

BO06025.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:37:40 Download gff for BO06025.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5315-PB 182..1089 18..923 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:05:43 Download gff for BO06025.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5315-PA 428..1335 18..923 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:17:02 Download gff for BO06025.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5315-RA 662..1566 19..923 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:29:37 Download gff for BO06025.3prime
Subject Subject Range Query Range Percent Splice Strand
AdipoR-RA 662..1566 19..923 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:29:37 Download gff for BO06025.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 22544426..22544557 19..150 100 <- Plus
3R 22544615..22544694 151..230 100 <- Plus
3R 22544758..22545059 231..532 100 <- Plus
3R 22545118..22545470 533..885 100 <- Plus
3R 22545685..22545722 886..923 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:17:02 Download gff for BO06025.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18371407..18371444 886..923 100   Plus
arm_3R 18370148..18370279 19..150 100 <- Plus
arm_3R 18370337..18370416 151..230 100 <- Plus
arm_3R 18370480..18370781 231..532 100 <- Plus
arm_3R 18370840..18371192 533..885 100 <- Plus

BO06025.5prime Sequence

877 bp (818 high quality bases) assembled on 2005-12-02

> BO06025.5prime
GAAGTTATCAGTCGACATGGATTCGGCCACTAATCTCCTCGAGCAACAGG
GCTCAGCGGCTGATGTGAGTGGCGGGAGCCATCCCGCCGAGGTGGAGGTA
ACCACCCAGGCTCGAGCCACTTTCGGCATGGACGCCGAAGGACATGCTAC
CGGCGAGGCGGTGACCACCACCACGGCCACCTTGCGTAGAGAAGGTTCAG
ACGAGGATATCTTTGAGCAGGTGCAGATGATCCTGCGCAAGCGACGTGGC
TGGGGACCGGAGGACTCGCTTAGCCCCAATGATCTGGACATTCTGGAGTA
CGACGATGAGTTGGTCGAGGAGGATGACGCCGGTTGTCCACTCCCCTCGA
CCCCGGAGGACACACAGCTTATTGAGGCGGAGATGACGGAAGTGCTGAAG
GCCGGAGTTCTCTCCGATGAAATTGATTTGGGCGCATTGGCACACAATGC
CGCCGAGCAGGCAGAGGAGTTTGTGCGCAAGGTCTGGGAGGCTAGCTGGA
AAGTGTGCCACTACAAAAATCTACCCAAGTGGCTGCAGGATAACGACTTC
CTACACCGCGGCCATCGCCCACCGCTCCCCTCTTTCCGTGCGTGCTTTAA
ATCAATTTTCCGCGTGCACACGGAAACGGGCAACATCTGGACACATCTTC
TTGGCTGCATCGCCTTCATCGGCGTGGCATTATACTTCATCTCGCGTCCC
TCGGTTGAGATCCAGACACAGGAGAAGATCGTTTTTGGCGCCTTCTTTAT
CGGTGCGATTGTGTGCCTAGGATTCTCATTCGCTTTTCACACACTGAGCT
GTCATTCTGTAGAGATGGGAAGACTGTTTTTCTAACTTGACTACTGTGGA
ATTGCGCTGCTGATCATGGGTTCCTTT

BO06025.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:33:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG5315-PC 1335 CG5315-RC 1..814 17..830 4070 100 Plus
CG5315-PA 1335 CG5315-RA 1..814 17..830 4070 100 Plus
CG5315-PB 1089 CG5315-RB 121..568 383..830 2240 100 Plus
CG5315-PC 1335 CG5315-RC 818..861 834..877 220 100 Plus
CG5315-PA 1335 CG5315-RA 818..861 834..877 220 100 Plus
CG5315-PB 1089 CG5315-RB 572..615 834..877 220 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:50:37
Subject Length Description Subject Range Query Range Score Percent Strand
AdipoR-RE 1869 CG5315-RE 228..1089 16..877 4265 99.8 Plus
AdipoR-RD 1875 CG5315-RD 234..1095 16..877 4265 99.8 Plus
AdipoR-RA 2299 CG5315-RA 234..1095 16..877 4265 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:50:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22546708..22547078 386..16 1840 99.7 Minus
3R 32079331 3R 22545122..22545472 830..480 1755 100 Minus
3R 32079331 3R 22545683..22545785 483..381 515 100 Minus
3R 32079331 3R 22545017..22545059 877..835 215 100 Minus
Blast to na_te.dros performed on 2015-02-12 06:50:35 has no hits.

BO06025.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:37:42 Download gff for BO06025.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5315-PC 1..861 17..877 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:05:44 Download gff for BO06025.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5315-PA 1..861 17..877 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:30:57 Download gff for BO06025.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5315-RA 224..1095 7..877 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:23:30 Download gff for BO06025.5prime
Subject Subject Range Query Range Percent Splice Strand
AdipoR-RA 224..1095 7..877 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:23:30 Download gff for BO06025.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 22545118..22545470 482..834 99 <- Minus
3R 22545685..22545783 383..481 100 <- Minus
3R 22545017..22545059 835..877 100 <- Minus
3R 22546712..22547088 7..382 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:30:57 Download gff for BO06025.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18370739..18370781 835..877 100 <- Minus
arm_3R 18370840..18371192 482..834 99 <- Minus
arm_3R 18371407..18371505 383..481 100 <- Minus
arm_3R 18372434..18372810 7..382 98   Minus

BO06025.complete Sequence

1366 bp (1366 high quality bases) assembled on 2005-10-20

GenBank Submission: FJ630235

> BO06025.complete
GAAGTTATCAGTCGACATGGATTCGGCCACTAATCTCCTCGAGCAACAGG
GCTCAGCGGCTGATGTGAGTGGCGGGAGCCATCCCGCCGAGGTGGAGGTA
ACCACCCAGGCTCGAGCCACTTTCGGCATGGACGCCGAAGGACATGCTAC
CGGCGAGGCGGTGACCACCACCACGGCCACCTTGCGTAGAGAAGGTTCAG
ACGAGGATATCTTTGAGCAGGTGCAGATGATCCTGCGCAAGCGACGTGGC
TGGGGACCGGAGGACTCGCTTAGCCCCAATGATCTGGACATTCTGGAGTA
CGACGATGAGTTGGTCGAGGAGGATGACGCCGGTTGTCCACTCCCCTCGA
CCCCGGAGGACACACAGCTTATTGAGGCGGAGATGACGGAAGTGCTGAAG
GCCGGAGTTCTCTCCGATGAAATTGATTTGGGCGCATTGGCACACAATGC
CGCCGAGCAGGCAGAGGAGTTTGTGCGCAAGGTCTGGGAGGCTAGCTGGA
AAGTGTGCCACTACAAAAATCTACCCAAGTGGCTGCAGGATAACGACTTC
CTACACCGCGGCCATCGCCCACCGCTCCCCTCTTTCCGTGCGTGCTTTAA
ATCAATTTTCCGCGTGCACACGGAAACGGGCAACATCTGGACACATCTTC
TTGGCTGCATCGCCTTCATCGGCGTGGCATTATACTTCATCTCGCGTCCC
TCGGTTGAGATCCAGACACAGGAGAAGATCGTTTTTGGCGCCTTCTTTAT
CGGTGCGATTGTGTGCCTAGGATTCTCATTCGCTTTTCACACACTGAGCT
GTCATTCTGTAGAGATGGGAAGACTGTTTTCTAAACTTGACTACTGTGGA
ATTGCGCTGCTGATCATGGGTTCCTTTGTGCCTTGGCTGTACTATGGCTT
CTACTGTCATTACCAGCCAAAGGTGATATACCTATCCGTTGTTAGCATTC
TGGGCATCCTCTCCATCGTGGTCTCGCTATGGGACAAGTTTTCGGAGCCG
GCACTTCGTCCCTTGCGCGCTGGCGTATTTATGAGCTTTGGCCTGTCGGG
TGTGATTCCAGCTATTCACTACAGCATCATGGAGGGCTGGTTCAGCCAGA
TGAGCCGCGCCAGTCTGGGATGGCTAATTCTGATGGGCCTCCTCTACATT
CTGGGCGCACTGCTGTACGCCCTCCGTGTTCCCGAACGCTGGTTCCCTGG
AAAGTTTGACATTTGGGGTCAATCACATCAAATATTCCACATACTGGTCA
TTGCGGCCGCTTTTGTCCACTACCATGGCATCTCTGAAATGGCCATGTAC
CGCGTCATGTATAGCGAATGCACTGTTCCCATCGAACCAATAACCTTTGC
AAGCTTTCTAGACCAT

BO06025.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:04:34
Subject Length Description Subject Range Query Range Score Percent Strand
AdipoR-RE 1335 CG5315-PE 1..1332 17..1348 6660 100 Plus
AdipoR-RD 1335 CG5315-PD 1..1332 17..1348 6660 100 Plus
AdipoR-RA 1335 CG5315-PA 1..1332 17..1348 6660 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:04:35
Subject Length Description Subject Range Query Range Score Percent Strand
AdipoR-RE 1869 CG5315-RE 228..1560 16..1348 6665 100 Plus
AdipoR-RD 1875 CG5315-RD 234..1566 16..1348 6665 100 Plus
AdipoR-RA 2299 CG5315-RA 234..1566 16..1348 6665 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:04:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22546708..22547078 386..16 1840 99.7 Minus
3R 32079331 3R 22545118..22545472 834..480 1775 100 Minus
3R 32079331 3R 22544757..22545059 1137..835 1515 100 Minus
3R 32079331 3R 22544426..22544558 1348..1216 665 100 Minus
3R 32079331 3R 22545683..22545785 483..381 515 100 Minus
3R 32079331 3R 22544614..22544695 1217..1136 410 100 Minus
Blast to na_te.dros performed 2014-11-28 00:04:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\BuT6 387 Dbuz\BuT6 BUT6 387bp 152..188 853..889 113 78.4 Plus

BO06025.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:27:44 Download gff for BO06025.complete
Subject Subject Range Query Range Percent Splice Strand
CG5315-RA 1..1335 17..1349 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:53:18 Download gff for BO06025.complete
Subject Subject Range Query Range Percent Splice Strand
CG5315-RA 223..1565 7..1348 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:44:59 Download gff for BO06025.complete
Subject Subject Range Query Range Percent Splice Strand
CG5315-RA 235..1566 17..1350 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:27:44 Download gff for BO06025.complete
Subject Subject Range Query Range Percent Splice Strand
CG5315-RA 223..1565 7..1348 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:14:00 Download gff for BO06025.complete
Subject Subject Range Query Range Percent Splice Strand
AdipoR-RA 235..1566 17..1350 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:14:00 Download gff for BO06025.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22544615..22544694 1137..1216 100 <- Minus
3R 22544758..22545059 835..1136 100 <- Minus
3R 22545118..22545470 482..834 100 <- Minus
3R 22545685..22545783 383..481 100 <- Minus
3R 22544424..22544557 1217..1350 98 <- Minus
3R 22546712..22547077 17..382 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:44:59 Download gff for BO06025.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18370337..18370416 1137..1216 100 <- Minus
arm_3R 18370480..18370781 835..1136 100 <- Minus
arm_3R 18370840..18371192 482..834 100 <- Minus
arm_3R 18371407..18371505 383..481 100 <- Minus
arm_3R 18370146..18370279 1217..1350 98 <- Minus
arm_3R 18372434..18372799 17..382 100   Minus

BO06025.pep Sequence

Translation from 16 to 1366

> BO06025.pep
MDSATNLLEQQGSAADVSGGSHPAEVEVTTQARATFGMDAEGHATGEAVT
TTTATLRREGSDEDIFEQVQMILRKRRGWGPEDSLSPNDLDILEYDDELV
EEDDAGCPLPSTPEDTQLIEAEMTEVLKAGVLSDEIDLGALAHNAAEQAE
EFVRKVWEASWKVCHYKNLPKWLQDNDFLHRGHRPPLPSFRACFKSIFRV
HTETGNIWTHLLGCIAFIGVALYFISRPSVEIQTQEKIVFGAFFIGAIVC
LGFSFAFHTLSCHSVEMGRLFSKLDYCGIALLIMGSFVPWLYYGFYCHYQ
PKVIYLSVVSILGILSIVVSLWDKFSEPALRPLRAGVFMSFGLSGVIPAI
HYSIMEGWFSQMSRASLGWLILMGLLYILGALLYALRVPERWFPGKFDIW
GQSHQIFHILVIAAAFVHYHGISEMAMYRVMYSECTVPIEPITFASFLDH

BO06025.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:43:44
Subject Length Description Subject Range Query Range Score Percent Strand
AdipoR-PE 444 CG5315-PE 1..444 1..444 2351 100 Plus
AdipoR-PD 444 CG5315-PD 1..444 1..444 2351 100 Plus
AdipoR-PA 444 CG5315-PA 1..444 1..444 2351 100 Plus
AdipoR-PC 444 CG5315-PC 1..444 1..444 2351 100 Plus
AdipoR-PB 362 CG5315-PB 29..362 110..444 1728 97.3 Plus