Clone Sequence Records
BO06025.3prime Sequence
923 bp (832 high quality bases) assembled on 2005-12-02
> BO06025.3prime
ATGGTCTAGAAAGCTTGCAAAGGTTATTGGTTCGATGGGAACAGTGCATT
CGCTATACATGACGCGGTACATGGCCATTTCAGAGATGCCATGGTAGTGG
ACAAAAGCGGCCGCAATGACCAGTATGTGGAATATTTGATGTGATTGACC
CCAAATGTCAAACTTTCCAGGGAACCAGCGTTCGGGAACACGGAGGGCGT
ACAGCAGTGCGCCCAGAATGTAGAGGAGGCCCATCAGAATTAGCCATCCC
AGACTGGCGCGGCTCATCTGGCTGAACCAGCCCTCCATGATGCTGTAGTG
AATAGCTGGAATCACACCCGACAGGCCAAAGCTCATAAATACGCCAGCGC
GCAAGGGACGAAGTGCCGGCTCCGAAAACTTGTCCCATAGCGAGACCACG
ATGGAGAGGATGCCCAGAATGCTAACAACGGATAGGTATATCACCTTTGG
CTGGTAATGACAGTAGAAGCCATAGTACAGCCAAGGCACAAAGGAACCCA
TGATCAGCAGCGCAATTCCACAGTAGTCAAGTTTAGAAAACAGTCTTCCC
ATCTCTACAGAATGACAGCTCAGTGTGTGAAAAGCGAATGAGAATCCTAG
GCACACAATCGCACCGATAAAGAAGGCGCCAAAAACGATCTTCTCCTGTG
TCTGGATCTCAACCGAGGGACGCGAGATGAAGTATAATGCCACGCCGATG
AAGGCGATGCAGCCAAGAAGATGTGTCCAGATGTTGCCCGTTTCCGTGTG
CACGCGGAAAATTGATTTAAAGCACGCACGGAAAGAGGGGAGCGGTGGGC
GATGGCCGCGGTGTAGGAAGTCGTTATCCTGCAGCCACTTGGGTAGATTT
TTGTAGTGGCACACTTTCCAGCTAGCCTCCCAGACCTTGCGCACAAACTC
CTCTGCCTGCTCGGCGGCATTGT
BO06025.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:33:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5315-PC | 1335 | CG5315-RC | 428..1332 | 923..19 | 4525 | 100 | Minus |
CG5315-PB | 1089 | CG5315-RB | 182..1086 | 923..19 | 4525 | 100 | Minus |
CG5315-PA | 1335 | CG5315-RA | 428..1332 | 923..19 | 4525 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:57:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
AdipoR-RE | 1869 | CG5315-RE | 656..1560 | 923..19 | 4525 | 100 | Minus |
AdipoR-RD | 1875 | CG5315-RD | 662..1566 | 923..19 | 4525 | 100 | Minus |
AdipoR-RA | 2299 | CG5315-RA | 662..1566 | 923..19 | 4525 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:57:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22545118..22545472 | 533..887 | 1775 | 100 | Plus |
3R | 32079331 | 3R | 22544757..22545059 | 230..532 | 1515 | 100 | Plus |
3R | 32079331 | 3R | 22544426..22544558 | 19..151 | 665 | 100 | Plus |
3R | 32079331 | 3R | 22544614..22544695 | 150..231 | 410 | 100 | Plus |
3R | 32079331 | 3R | 22545683..22545722 | 884..923 | 200 | 100 | Plus |
Blast to na_te.dros performed 2015-02-11 04:57:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\BuT6 | 387 | Dbuz\BuT6 BUT6 387bp | 152..188 | 514..478 | 113 | 78.4 | Minus |
BO06025.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:37:40 Download gff for
BO06025.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-PB | 182..1089 | 18..923 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:05:43 Download gff for
BO06025.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-PA | 428..1335 | 18..923 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:17:02 Download gff for
BO06025.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-RA | 662..1566 | 19..923 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:29:37 Download gff for
BO06025.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
AdipoR-RA | 662..1566 | 19..923 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:29:37 Download gff for
BO06025.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22544426..22544557 | 19..150 | 100 | <- | Plus |
3R | 22544615..22544694 | 151..230 | 100 | <- | Plus |
3R | 22544758..22545059 | 231..532 | 100 | <- | Plus |
3R | 22545118..22545470 | 533..885 | 100 | <- | Plus |
3R | 22545685..22545722 | 886..923 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:17:02 Download gff for
BO06025.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18371407..18371444 | 886..923 | 100 | | Plus |
arm_3R | 18370148..18370279 | 19..150 | 100 | <- | Plus |
arm_3R | 18370337..18370416 | 151..230 | 100 | <- | Plus |
arm_3R | 18370480..18370781 | 231..532 | 100 | <- | Plus |
arm_3R | 18370840..18371192 | 533..885 | 100 | <- | Plus |
BO06025.5prime Sequence
877 bp (818 high quality bases) assembled on 2005-12-02
> BO06025.5prime
GAAGTTATCAGTCGACATGGATTCGGCCACTAATCTCCTCGAGCAACAGG
GCTCAGCGGCTGATGTGAGTGGCGGGAGCCATCCCGCCGAGGTGGAGGTA
ACCACCCAGGCTCGAGCCACTTTCGGCATGGACGCCGAAGGACATGCTAC
CGGCGAGGCGGTGACCACCACCACGGCCACCTTGCGTAGAGAAGGTTCAG
ACGAGGATATCTTTGAGCAGGTGCAGATGATCCTGCGCAAGCGACGTGGC
TGGGGACCGGAGGACTCGCTTAGCCCCAATGATCTGGACATTCTGGAGTA
CGACGATGAGTTGGTCGAGGAGGATGACGCCGGTTGTCCACTCCCCTCGA
CCCCGGAGGACACACAGCTTATTGAGGCGGAGATGACGGAAGTGCTGAAG
GCCGGAGTTCTCTCCGATGAAATTGATTTGGGCGCATTGGCACACAATGC
CGCCGAGCAGGCAGAGGAGTTTGTGCGCAAGGTCTGGGAGGCTAGCTGGA
AAGTGTGCCACTACAAAAATCTACCCAAGTGGCTGCAGGATAACGACTTC
CTACACCGCGGCCATCGCCCACCGCTCCCCTCTTTCCGTGCGTGCTTTAA
ATCAATTTTCCGCGTGCACACGGAAACGGGCAACATCTGGACACATCTTC
TTGGCTGCATCGCCTTCATCGGCGTGGCATTATACTTCATCTCGCGTCCC
TCGGTTGAGATCCAGACACAGGAGAAGATCGTTTTTGGCGCCTTCTTTAT
CGGTGCGATTGTGTGCCTAGGATTCTCATTCGCTTTTCACACACTGAGCT
GTCATTCTGTAGAGATGGGAAGACTGTTTTTCTAACTTGACTACTGTGGA
ATTGCGCTGCTGATCATGGGTTCCTTT
BO06025.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:33:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5315-PC | 1335 | CG5315-RC | 1..814 | 17..830 | 4070 | 100 | Plus |
CG5315-PA | 1335 | CG5315-RA | 1..814 | 17..830 | 4070 | 100 | Plus |
CG5315-PB | 1089 | CG5315-RB | 121..568 | 383..830 | 2240 | 100 | Plus |
CG5315-PC | 1335 | CG5315-RC | 818..861 | 834..877 | 220 | 100 | Plus |
CG5315-PA | 1335 | CG5315-RA | 818..861 | 834..877 | 220 | 100 | Plus |
CG5315-PB | 1089 | CG5315-RB | 572..615 | 834..877 | 220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:50:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
AdipoR-RE | 1869 | CG5315-RE | 228..1089 | 16..877 | 4265 | 99.8 | Plus |
AdipoR-RD | 1875 | CG5315-RD | 234..1095 | 16..877 | 4265 | 99.8 | Plus |
AdipoR-RA | 2299 | CG5315-RA | 234..1095 | 16..877 | 4265 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:50:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22546708..22547078 | 386..16 | 1840 | 99.7 | Minus |
3R | 32079331 | 3R | 22545122..22545472 | 830..480 | 1755 | 100 | Minus |
3R | 32079331 | 3R | 22545683..22545785 | 483..381 | 515 | 100 | Minus |
3R | 32079331 | 3R | 22545017..22545059 | 877..835 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 06:50:35 has no hits.
BO06025.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:37:42 Download gff for
BO06025.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-PC | 1..861 | 17..877 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:05:44 Download gff for
BO06025.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-PA | 1..861 | 17..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:30:57 Download gff for
BO06025.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-RA | 224..1095 | 7..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:23:30 Download gff for
BO06025.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
AdipoR-RA | 224..1095 | 7..877 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:23:30 Download gff for
BO06025.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22545118..22545470 | 482..834 | 99 | <- | Minus |
3R | 22545685..22545783 | 383..481 | 100 | <- | Minus |
3R | 22545017..22545059 | 835..877 | 100 | <- | Minus |
3R | 22546712..22547088 | 7..382 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:30:57 Download gff for
BO06025.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18370739..18370781 | 835..877 | 100 | <- | Minus |
arm_3R | 18370840..18371192 | 482..834 | 99 | <- | Minus |
arm_3R | 18371407..18371505 | 383..481 | 100 | <- | Minus |
arm_3R | 18372434..18372810 | 7..382 | 98 | | Minus |
BO06025.complete Sequence
1366 bp (1366 high quality bases) assembled on 2005-10-20
GenBank Submission: FJ630235
> BO06025.complete
GAAGTTATCAGTCGACATGGATTCGGCCACTAATCTCCTCGAGCAACAGG
GCTCAGCGGCTGATGTGAGTGGCGGGAGCCATCCCGCCGAGGTGGAGGTA
ACCACCCAGGCTCGAGCCACTTTCGGCATGGACGCCGAAGGACATGCTAC
CGGCGAGGCGGTGACCACCACCACGGCCACCTTGCGTAGAGAAGGTTCAG
ACGAGGATATCTTTGAGCAGGTGCAGATGATCCTGCGCAAGCGACGTGGC
TGGGGACCGGAGGACTCGCTTAGCCCCAATGATCTGGACATTCTGGAGTA
CGACGATGAGTTGGTCGAGGAGGATGACGCCGGTTGTCCACTCCCCTCGA
CCCCGGAGGACACACAGCTTATTGAGGCGGAGATGACGGAAGTGCTGAAG
GCCGGAGTTCTCTCCGATGAAATTGATTTGGGCGCATTGGCACACAATGC
CGCCGAGCAGGCAGAGGAGTTTGTGCGCAAGGTCTGGGAGGCTAGCTGGA
AAGTGTGCCACTACAAAAATCTACCCAAGTGGCTGCAGGATAACGACTTC
CTACACCGCGGCCATCGCCCACCGCTCCCCTCTTTCCGTGCGTGCTTTAA
ATCAATTTTCCGCGTGCACACGGAAACGGGCAACATCTGGACACATCTTC
TTGGCTGCATCGCCTTCATCGGCGTGGCATTATACTTCATCTCGCGTCCC
TCGGTTGAGATCCAGACACAGGAGAAGATCGTTTTTGGCGCCTTCTTTAT
CGGTGCGATTGTGTGCCTAGGATTCTCATTCGCTTTTCACACACTGAGCT
GTCATTCTGTAGAGATGGGAAGACTGTTTTCTAAACTTGACTACTGTGGA
ATTGCGCTGCTGATCATGGGTTCCTTTGTGCCTTGGCTGTACTATGGCTT
CTACTGTCATTACCAGCCAAAGGTGATATACCTATCCGTTGTTAGCATTC
TGGGCATCCTCTCCATCGTGGTCTCGCTATGGGACAAGTTTTCGGAGCCG
GCACTTCGTCCCTTGCGCGCTGGCGTATTTATGAGCTTTGGCCTGTCGGG
TGTGATTCCAGCTATTCACTACAGCATCATGGAGGGCTGGTTCAGCCAGA
TGAGCCGCGCCAGTCTGGGATGGCTAATTCTGATGGGCCTCCTCTACATT
CTGGGCGCACTGCTGTACGCCCTCCGTGTTCCCGAACGCTGGTTCCCTGG
AAAGTTTGACATTTGGGGTCAATCACATCAAATATTCCACATACTGGTCA
TTGCGGCCGCTTTTGTCCACTACCATGGCATCTCTGAAATGGCCATGTAC
CGCGTCATGTATAGCGAATGCACTGTTCCCATCGAACCAATAACCTTTGC
AAGCTTTCTAGACCAT
BO06025.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:04:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
AdipoR-RE | 1335 | CG5315-PE | 1..1332 | 17..1348 | 6660 | 100 | Plus |
AdipoR-RD | 1335 | CG5315-PD | 1..1332 | 17..1348 | 6660 | 100 | Plus |
AdipoR-RA | 1335 | CG5315-PA | 1..1332 | 17..1348 | 6660 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:04:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
AdipoR-RE | 1869 | CG5315-RE | 228..1560 | 16..1348 | 6665 | 100 | Plus |
AdipoR-RD | 1875 | CG5315-RD | 234..1566 | 16..1348 | 6665 | 100 | Plus |
AdipoR-RA | 2299 | CG5315-RA | 234..1566 | 16..1348 | 6665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:04:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22546708..22547078 | 386..16 | 1840 | 99.7 | Minus |
3R | 32079331 | 3R | 22545118..22545472 | 834..480 | 1775 | 100 | Minus |
3R | 32079331 | 3R | 22544757..22545059 | 1137..835 | 1515 | 100 | Minus |
3R | 32079331 | 3R | 22544426..22544558 | 1348..1216 | 665 | 100 | Minus |
3R | 32079331 | 3R | 22545683..22545785 | 483..381 | 515 | 100 | Minus |
3R | 32079331 | 3R | 22544614..22544695 | 1217..1136 | 410 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 00:04:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\BuT6 | 387 | Dbuz\BuT6 BUT6 387bp | 152..188 | 853..889 | 113 | 78.4 | Plus |
BO06025.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:27:44 Download gff for
BO06025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-RA | 1..1335 | 17..1349 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:53:18 Download gff for
BO06025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-RA | 223..1565 | 7..1348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:44:59 Download gff for
BO06025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-RA | 235..1566 | 17..1350 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:27:44 Download gff for
BO06025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5315-RA | 223..1565 | 7..1348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:14:00 Download gff for
BO06025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
AdipoR-RA | 235..1566 | 17..1350 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:14:00 Download gff for
BO06025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22544615..22544694 | 1137..1216 | 100 | <- | Minus |
3R | 22544758..22545059 | 835..1136 | 100 | <- | Minus |
3R | 22545118..22545470 | 482..834 | 100 | <- | Minus |
3R | 22545685..22545783 | 383..481 | 100 | <- | Minus |
3R | 22544424..22544557 | 1217..1350 | 98 | <- | Minus |
3R | 22546712..22547077 | 17..382 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:44:59 Download gff for
BO06025.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18370337..18370416 | 1137..1216 | 100 | <- | Minus |
arm_3R | 18370480..18370781 | 835..1136 | 100 | <- | Minus |
arm_3R | 18370840..18371192 | 482..834 | 100 | <- | Minus |
arm_3R | 18371407..18371505 | 383..481 | 100 | <- | Minus |
arm_3R | 18370146..18370279 | 1217..1350 | 98 | <- | Minus |
arm_3R | 18372434..18372799 | 17..382 | 100 | | Minus |
BO06025.pep Sequence
Translation from 16 to 1366
> BO06025.pep
MDSATNLLEQQGSAADVSGGSHPAEVEVTTQARATFGMDAEGHATGEAVT
TTTATLRREGSDEDIFEQVQMILRKRRGWGPEDSLSPNDLDILEYDDELV
EEDDAGCPLPSTPEDTQLIEAEMTEVLKAGVLSDEIDLGALAHNAAEQAE
EFVRKVWEASWKVCHYKNLPKWLQDNDFLHRGHRPPLPSFRACFKSIFRV
HTETGNIWTHLLGCIAFIGVALYFISRPSVEIQTQEKIVFGAFFIGAIVC
LGFSFAFHTLSCHSVEMGRLFSKLDYCGIALLIMGSFVPWLYYGFYCHYQ
PKVIYLSVVSILGILSIVVSLWDKFSEPALRPLRAGVFMSFGLSGVIPAI
HYSIMEGWFSQMSRASLGWLILMGLLYILGALLYALRVPERWFPGKFDIW
GQSHQIFHILVIAAAFVHYHGISEMAMYRVMYSECTVPIEPITFASFLDH
BO06025.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:43:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
AdipoR-PE | 444 | CG5315-PE | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PD | 444 | CG5315-PD | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PA | 444 | CG5315-PA | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PC | 444 | CG5315-PC | 1..444 | 1..444 | 2351 | 100 | Plus |
AdipoR-PB | 362 | CG5315-PB | 29..362 | 110..444 | 1728 | 97.3 | Plus |