Clone BO06032 Report

Search the DGRC for BO06032

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:60
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG11674-RA
Protein status:BO06032.pep: validated full length
Sequenced Size:1066

Clone Sequence Records

BO06032.3prime Sequence

840 bp (821 high quality bases) assembled on 2005-12-02

> BO06032.3prime
ATGGTCTAGAAAGCTTGCATAAAGAATCATTGTGAACTGGATACAAAGGA
AGGCCACAAAGCCTCTTAGTTGATAATTCGTTGCGGAGTTCTCCACAAAA
ACGCACTTGTTGTCCTCCAGTCGATGGGTCTTACTGCAGGAGCACTCGCC
CCAATTGCACACCATGGGATGGCCAATGGATGCTGTGGCATTCTCCTGGT
CCATGGGCTGCATCCGGCATTCGCTATCGTTTCGACAGAGTGCCCCGAAC
GGCACGATGGGTGCGCAAGTGATCCGCTCCAGATTGTTCACCGCATCGAG
ATCGTCGTTTTCGTCCTTGGCCACCTCGTTGGCTACCCTTTTGGGGTAGT
GGGTCGAACGGCAGACGCAGAGGTGATCCAGGCACCTGCCATCGGCACCC
AGGTTTAGCTTGCACGGCGAACTGTGCTCGCACGTGTCACCGTAAGCGGA
GCCCTTGATGCACTTGGTCATGTTGTGGTTGTGCACAAAGTTTTTGGAGC
AGCCGCACCGCTTCGTCTTTGTCAGGCAAATCGAGGCTCCACAGCTGCCG
CAATCCTTGTCCTCTAGACAGCTTGATTGCAAAACAGAAAGACAACGTCC
CTCGTGGAACTCGAATTGGTTAAGGCAGAGGCACTGGTTGCCAATGCAGG
AGCTAAACCGATCCGCCCGCTGGCACTGTTGCTGAAACTCACAGCTTCCG
CCCACCGGGACCACCGCCGGCAGGCAGCGTCTGCGGTCGTCACTGGACAC
ATGACCCTCGGAGCAGTGGCACTGCTGCCATCGCGTGTGGCATATGGCAT
TCGGCATGGGACATGGACAGGCAACACCAATGATGTTGGT

BO06032.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:33:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG11674-PA 1035 CG11674-RA 211..1032 840..19 4085 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:51:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG11674-RA 1172 CG11674-RA 287..1108 840..19 4095 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:51:26
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14224711..14225270 19..578 2800 100 Plus
X 23542271 X 14225332..14225593 579..840 1295 99.6 Plus
Blast to na_te.dros performed on 2015-02-13 00:51:30 has no hits.

BO06032.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:37:55 Download gff for BO06032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-PA 211..1035 18..840 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:06:01 Download gff for BO06032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-PA 211..1035 18..840 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:27:49 Download gff for BO06032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 287..1108 19..840 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:56:16 Download gff for BO06032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 287..1108 19..840 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:56:16 Download gff for BO06032.3prime
Subject Subject Range Query Range Percent Splice Strand
X 14224711..14225270 19..578 100 <- Plus
X 14225332..14225593 579..840 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:27:49 Download gff for BO06032.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14118744..14119303 19..578 100 <- Plus
arm_X 14119365..14119626 579..840 99   Plus

BO06032.5prime Sequence

834 bp (776 high quality bases) assembled on 2005-12-02

> BO06032.5prime
GAAGTTATCAGTCGACATGCTAGCGATGCACAGGTGGATCCTACTGCTGC
TGGCCGGATTTCTAGCGACTGGTCGGGCGGAGGATCTGCTGGAGTTGTCC
TGCAGCTCGGACGCACAGTGCGCCCAGTTTGAGCGCGGTCGCTGCGTGGA
CATGGCCTGCATCTGCACAGCACGTGGCTCCGGCGAACGGGTGCCGTGTA
CGCCGCTGGAGGAGCGCCTCAAGCTGACCAACATCATTGGTGGTGCCTGT
CCATGTCCCATGCCGAATGCCATATGCCACACGCGATGGCAGCAGTGCCA
CTGCTCCGAGGGTCATGTGTCCAGTGACGACCGCAGACGCTGCCTGCCGG
CGGTGGTCCCGGTGGGCGGAAGCTGTGAGTTTCAGCAACAGTGCCAGCGG
GCGGATCGGTTTAGCTCCTGCATTGGCAACCAGTGCCTCTGCCTTAACCA
ATTCGAGTTCCACGAGGGACGTTGTCTTTCTGTTTTGCAATCAAGCTGTC
TAGAGGACAAGGATTGCGGCAGCTGTGGAGCCTCGATTTGCCTGACAAAG
ACGAAGCGGTGCGGCTGCTCCAAAAACTTTGTGCACAACCACAACATGAC
CAAGTGCATCAAGGGCTCCGCTTACGGTGACACGTGCGAGCACAGTTCGC
CGTGCAAGCTAAACCTGGGTGCCGATGGCAGGTGCCTGGATCACCTCTGC
GTCTGCCGTTCGACCCACTACCCCAAAAGGGTAGCCAACGAGGTGGCCAA
GGACGAAAACGACGATCTCGATGCGGTGAACAATCTGGAGCGGATCACTT
GCGCACCCATCGTGCCGTTCGGGGCACTCTGTCG

BO06032.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:33:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG11674-PA 1035 CG11674-RA 1..818 17..834 4090 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:51:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG11674-RA 1172 CG11674-RA 75..894 15..834 4100 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14225332..14225805 488..15 2370 100 Minus
X 23542271 X 14224925..14225270 834..489 1730 100 Minus
Blast to na_te.dros performed on 2015-02-04 19:50:58 has no hits.

BO06032.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:37:55 Download gff for BO06032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-PA 1..818 17..834 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:06:02 Download gff for BO06032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-PA 1..818 17..834 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:20:52 Download gff for BO06032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 71..894 10..834 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:43:14 Download gff for BO06032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 71..894 10..834 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:43:14 Download gff for BO06032.5prime
Subject Subject Range Query Range Percent Splice Strand
X 14224925..14225270 489..834 100 <- Minus
X 14225332..14225809 10..488 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:20:52 Download gff for BO06032.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14118958..14119303 489..834 100 <- Minus
arm_X 14119365..14119842 10..488 99   Minus

BO06032.complete Sequence

1066 bp (1066 high quality bases) assembled on 2005-10-20

GenBank Submission: FJ630240

> BO06032.complete
GAAGTTATCAGTCGACATGCTAGCGATGCACAGGTGGATCCTACTGCTGC
TGGCCGGATTTCTAGCGACTGGTCGGGCGGAGGATCTGCTGGAGTTGTCC
TGCAGCTCGGACGCACAGTGCGCCCAGTTTGAGCGCGGTCGCTGCGTGGA
CATGGCCTGCATCTGCACAGCACGTGGCTCCGGCGAACGGGTGCCGTGTA
CGCCGCTGGAGGAGCGCCTCAAGCTGACCAACATCATTGGTGGTGCCTGT
CCATGTCCCATGCCGAATGCCATATGCCACACGCGATGGCAGCAGTGCCA
CTGCTCCGAGGGTCATGTGTCCAGTGACGACCGCAGACGCTGCCTGCCGG
CGGTGGTCCCGGTGGGCGGAAGCTGTGAGTTTCAGCAACAGTGCCAGCGG
GCGGATCGGTTTAGCTCCTGCATTGGCAACCAGTGCCTCTGCCTTAACCA
ATTCGAGTTCCACGAGGGACGTTGTCTTTCTGTTTTGCAATCAAGCTGTC
TAGAGGACAAGGATTGCGGCAGCTGTGGAGCCTCGATTTGCCTGACAAAG
ACGAAGCGGTGCGGCTGCTCCAAAAACTTTGTGCACAACCACAACATGAC
CAAGTGCATCAAGGGCTCCGCTTACGGTGACACGTGCGAGCACAGTTCGC
CGTGCAAGCTAAACCTGGGTGCCGATGGCAGGTGCCTGGATCACCTCTGC
GTCTGCCGTTCGACCCACTACCCCAAAAGGGTAGCCAACGAGGTGGCCAA
GGACGAAAACGACGATCTCGATGCGGTGAACAATCTGGAGCGGATCACTT
GCGCACCCATCGTGCCGTTCGGGGCACTCTGTCGAAACGATAGCGAATGC
CGGATGCAGCCCATGGACCAGGAGAATGCCACAGCATCCATTGGCCATCC
CATGGTGTGCAATTGGGGCGAGTGCTCCTGCAGTAAGACCCATCGACTGG
AGGACAACAAGTGCGTTTTTGTGGAGAACTCCGCAACGAATTATCAACTA
AGAGGCTTTGTGGCCTTCCTTTGTATCCAGTTCACAATGATTCTTTATGC
AAGCTTTCTAGACCAT

BO06032.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:52:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG11674-RA 1035 CG11674-PA 1..1032 17..1048 5160 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG11674-RA 1172 CG11674-RA 75..1108 15..1048 5170 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:41
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14224711..14225270 1048..489 2800 100 Minus
X 23542271 X 14225332..14225805 488..15 2370 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:52:42 has no hits.

BO06032.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:27:32 Download gff for BO06032.complete
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 1..1035 17..1049 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:53:02 Download gff for BO06032.complete
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 76..1113 10..1048 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:12:03 Download gff for BO06032.complete
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 77..1108 17..1050 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:27:32 Download gff for BO06032.complete
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 76..1113 10..1048 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:33 Download gff for BO06032.complete
Subject Subject Range Query Range Percent Splice Strand
CG11674-RA 77..1108 17..1050 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:29:33 Download gff for BO06032.complete
Subject Subject Range Query Range Percent Splice Strand
X 14224709..14225270 489..1050 99 <- Minus
X 14225332..14225803 17..488 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:12:03 Download gff for BO06032.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14118742..14119303 489..1050 99 <- Minus
arm_X 14119365..14119836 17..488 100   Minus

BO06032.pep Sequence

Translation from 16 to 1066

> BO06032.pep
MLAMHRWILLLLAGFLATGRAEDLLELSCSSDAQCAQFERGRCVDMACIC
TARGSGERVPCTPLEERLKLTNIIGGACPCPMPNAICHTRWQQCHCSEGH
VSSDDRRRCLPAVVPVGGSCEFQQQCQRADRFSSCIGNQCLCLNQFEFHE
GRCLSVLQSSCLEDKDCGSCGASICLTKTKRCGCSKNFVHNHNMTKCIKG
SAYGDTCEHSSPCKLNLGADGRCLDHLCVCRSTHYPKRVANEVAKDENDD
LDAVNNLERITCAPIVPFGALCRNDSECRMQPMDQENATASIGHPMVCNW
GECSCSKTHRLEDNKCVFVENSATNYQLRGFVAFLCIQFTMILYASFLDH

BO06032.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:43:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG11674-PA 344 CG11674-PA 1..344 1..344 1922 100 Plus