Clone Sequence Records
BO06032.3prime Sequence
840 bp (821 high quality bases) assembled on 2005-12-02
> BO06032.3prime
ATGGTCTAGAAAGCTTGCATAAAGAATCATTGTGAACTGGATACAAAGGA
AGGCCACAAAGCCTCTTAGTTGATAATTCGTTGCGGAGTTCTCCACAAAA
ACGCACTTGTTGTCCTCCAGTCGATGGGTCTTACTGCAGGAGCACTCGCC
CCAATTGCACACCATGGGATGGCCAATGGATGCTGTGGCATTCTCCTGGT
CCATGGGCTGCATCCGGCATTCGCTATCGTTTCGACAGAGTGCCCCGAAC
GGCACGATGGGTGCGCAAGTGATCCGCTCCAGATTGTTCACCGCATCGAG
ATCGTCGTTTTCGTCCTTGGCCACCTCGTTGGCTACCCTTTTGGGGTAGT
GGGTCGAACGGCAGACGCAGAGGTGATCCAGGCACCTGCCATCGGCACCC
AGGTTTAGCTTGCACGGCGAACTGTGCTCGCACGTGTCACCGTAAGCGGA
GCCCTTGATGCACTTGGTCATGTTGTGGTTGTGCACAAAGTTTTTGGAGC
AGCCGCACCGCTTCGTCTTTGTCAGGCAAATCGAGGCTCCACAGCTGCCG
CAATCCTTGTCCTCTAGACAGCTTGATTGCAAAACAGAAAGACAACGTCC
CTCGTGGAACTCGAATTGGTTAAGGCAGAGGCACTGGTTGCCAATGCAGG
AGCTAAACCGATCCGCCCGCTGGCACTGTTGCTGAAACTCACAGCTTCCG
CCCACCGGGACCACCGCCGGCAGGCAGCGTCTGCGGTCGTCACTGGACAC
ATGACCCTCGGAGCAGTGGCACTGCTGCCATCGCGTGTGGCATATGGCAT
TCGGCATGGGACATGGACAGGCAACACCAATGATGTTGGT
BO06032.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:33:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11674-PA | 1035 | CG11674-RA | 211..1032 | 840..19 | 4085 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:51:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11674-RA | 1172 | CG11674-RA | 287..1108 | 840..19 | 4095 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:51:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 14224711..14225270 | 19..578 | 2800 | 100 | Plus |
X | 23542271 | X | 14225332..14225593 | 579..840 | 1295 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-13 00:51:30 has no hits.
BO06032.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:37:55 Download gff for
BO06032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-PA | 211..1035 | 18..840 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:06:01 Download gff for
BO06032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-PA | 211..1035 | 18..840 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:27:49 Download gff for
BO06032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 287..1108 | 19..840 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:56:16 Download gff for
BO06032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 287..1108 | 19..840 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:56:16 Download gff for
BO06032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 14224711..14225270 | 19..578 | 100 | <- | Plus |
X | 14225332..14225593 | 579..840 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:27:49 Download gff for
BO06032.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14118744..14119303 | 19..578 | 100 | <- | Plus |
arm_X | 14119365..14119626 | 579..840 | 99 | | Plus |
BO06032.5prime Sequence
834 bp (776 high quality bases) assembled on 2005-12-02
> BO06032.5prime
GAAGTTATCAGTCGACATGCTAGCGATGCACAGGTGGATCCTACTGCTGC
TGGCCGGATTTCTAGCGACTGGTCGGGCGGAGGATCTGCTGGAGTTGTCC
TGCAGCTCGGACGCACAGTGCGCCCAGTTTGAGCGCGGTCGCTGCGTGGA
CATGGCCTGCATCTGCACAGCACGTGGCTCCGGCGAACGGGTGCCGTGTA
CGCCGCTGGAGGAGCGCCTCAAGCTGACCAACATCATTGGTGGTGCCTGT
CCATGTCCCATGCCGAATGCCATATGCCACACGCGATGGCAGCAGTGCCA
CTGCTCCGAGGGTCATGTGTCCAGTGACGACCGCAGACGCTGCCTGCCGG
CGGTGGTCCCGGTGGGCGGAAGCTGTGAGTTTCAGCAACAGTGCCAGCGG
GCGGATCGGTTTAGCTCCTGCATTGGCAACCAGTGCCTCTGCCTTAACCA
ATTCGAGTTCCACGAGGGACGTTGTCTTTCTGTTTTGCAATCAAGCTGTC
TAGAGGACAAGGATTGCGGCAGCTGTGGAGCCTCGATTTGCCTGACAAAG
ACGAAGCGGTGCGGCTGCTCCAAAAACTTTGTGCACAACCACAACATGAC
CAAGTGCATCAAGGGCTCCGCTTACGGTGACACGTGCGAGCACAGTTCGC
CGTGCAAGCTAAACCTGGGTGCCGATGGCAGGTGCCTGGATCACCTCTGC
GTCTGCCGTTCGACCCACTACCCCAAAAGGGTAGCCAACGAGGTGGCCAA
GGACGAAAACGACGATCTCGATGCGGTGAACAATCTGGAGCGGATCACTT
GCGCACCCATCGTGCCGTTCGGGGCACTCTGTCG
BO06032.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:33:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11674-PA | 1035 | CG11674-RA | 1..818 | 17..834 | 4090 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:51:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11674-RA | 1172 | CG11674-RA | 75..894 | 15..834 | 4100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:50:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 14225332..14225805 | 488..15 | 2370 | 100 | Minus |
X | 23542271 | X | 14224925..14225270 | 834..489 | 1730 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 19:50:58 has no hits.
BO06032.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:37:55 Download gff for
BO06032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-PA | 1..818 | 17..834 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:06:02 Download gff for
BO06032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-PA | 1..818 | 17..834 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:20:52 Download gff for
BO06032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 71..894 | 10..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:43:14 Download gff for
BO06032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 71..894 | 10..834 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:43:14 Download gff for
BO06032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 14224925..14225270 | 489..834 | 100 | <- | Minus |
X | 14225332..14225809 | 10..488 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:20:52 Download gff for
BO06032.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14118958..14119303 | 489..834 | 100 | <- | Minus |
arm_X | 14119365..14119842 | 10..488 | 99 | | Minus |
BO06032.complete Sequence
1066 bp (1066 high quality bases) assembled on 2005-10-20
GenBank Submission: FJ630240
> BO06032.complete
GAAGTTATCAGTCGACATGCTAGCGATGCACAGGTGGATCCTACTGCTGC
TGGCCGGATTTCTAGCGACTGGTCGGGCGGAGGATCTGCTGGAGTTGTCC
TGCAGCTCGGACGCACAGTGCGCCCAGTTTGAGCGCGGTCGCTGCGTGGA
CATGGCCTGCATCTGCACAGCACGTGGCTCCGGCGAACGGGTGCCGTGTA
CGCCGCTGGAGGAGCGCCTCAAGCTGACCAACATCATTGGTGGTGCCTGT
CCATGTCCCATGCCGAATGCCATATGCCACACGCGATGGCAGCAGTGCCA
CTGCTCCGAGGGTCATGTGTCCAGTGACGACCGCAGACGCTGCCTGCCGG
CGGTGGTCCCGGTGGGCGGAAGCTGTGAGTTTCAGCAACAGTGCCAGCGG
GCGGATCGGTTTAGCTCCTGCATTGGCAACCAGTGCCTCTGCCTTAACCA
ATTCGAGTTCCACGAGGGACGTTGTCTTTCTGTTTTGCAATCAAGCTGTC
TAGAGGACAAGGATTGCGGCAGCTGTGGAGCCTCGATTTGCCTGACAAAG
ACGAAGCGGTGCGGCTGCTCCAAAAACTTTGTGCACAACCACAACATGAC
CAAGTGCATCAAGGGCTCCGCTTACGGTGACACGTGCGAGCACAGTTCGC
CGTGCAAGCTAAACCTGGGTGCCGATGGCAGGTGCCTGGATCACCTCTGC
GTCTGCCGTTCGACCCACTACCCCAAAAGGGTAGCCAACGAGGTGGCCAA
GGACGAAAACGACGATCTCGATGCGGTGAACAATCTGGAGCGGATCACTT
GCGCACCCATCGTGCCGTTCGGGGCACTCTGTCGAAACGATAGCGAATGC
CGGATGCAGCCCATGGACCAGGAGAATGCCACAGCATCCATTGGCCATCC
CATGGTGTGCAATTGGGGCGAGTGCTCCTGCAGTAAGACCCATCGACTGG
AGGACAACAAGTGCGTTTTTGTGGAGAACTCCGCAACGAATTATCAACTA
AGAGGCTTTGTGGCCTTCCTTTGTATCCAGTTCACAATGATTCTTTATGC
AAGCTTTCTAGACCAT
BO06032.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:52:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11674-RA | 1035 | CG11674-PA | 1..1032 | 17..1048 | 5160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11674-RA | 1172 | CG11674-RA | 75..1108 | 15..1048 | 5170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 14224711..14225270 | 1048..489 | 2800 | 100 | Minus |
X | 23542271 | X | 14225332..14225805 | 488..15 | 2370 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:52:42 has no hits.
BO06032.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:27:32 Download gff for
BO06032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 1..1035 | 17..1049 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:53:02 Download gff for
BO06032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 76..1113 | 10..1048 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:12:03 Download gff for
BO06032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 77..1108 | 17..1050 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:27:32 Download gff for
BO06032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 76..1113 | 10..1048 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:33 Download gff for
BO06032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11674-RA | 77..1108 | 17..1050 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:29:33 Download gff for
BO06032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 14224709..14225270 | 489..1050 | 99 | <- | Minus |
X | 14225332..14225803 | 17..488 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:12:03 Download gff for
BO06032.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14118742..14119303 | 489..1050 | 99 | <- | Minus |
arm_X | 14119365..14119836 | 17..488 | 100 | | Minus |
BO06032.pep Sequence
Translation from 16 to 1066
> BO06032.pep
MLAMHRWILLLLAGFLATGRAEDLLELSCSSDAQCAQFERGRCVDMACIC
TARGSGERVPCTPLEERLKLTNIIGGACPCPMPNAICHTRWQQCHCSEGH
VSSDDRRRCLPAVVPVGGSCEFQQQCQRADRFSSCIGNQCLCLNQFEFHE
GRCLSVLQSSCLEDKDCGSCGASICLTKTKRCGCSKNFVHNHNMTKCIKG
SAYGDTCEHSSPCKLNLGADGRCLDHLCVCRSTHYPKRVANEVAKDENDD
LDAVNNLERITCAPIVPFGALCRNDSECRMQPMDQENATASIGHPMVCNW
GECSCSKTHRLEDNKCVFVENSATNYQLRGFVAFLCIQFTMILYASFLDH
BO06032.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:43:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11674-PA | 344 | CG11674-PA | 1..344 | 1..344 | 1922 | 100 | Plus |