Clone Sequence Records
BO06035.3prime Sequence
907 bp (753 high quality bases) assembled on 2005-12-02
> BO06035.3prime
ATGGTCTAGAAAGCTTGCCATGTATTTAAATCTCAACCTTAACGTACGCT
CCTGGATGAGTAGCTCCACCTCGTTGCGGAGCACATTGATGTGTTCCATA
AAGTCCTCGCGAACTGCGTTGCGCCAGTCGTGCAGGCCATCGCTGCCCAC
ATGGTCGCAGTCCACGTAGCGGTGCACGAATCCGGTTGATAACGATAGTT
CCACATCGGATGTACTGGCCAAGAGCTGCGCCGGCGGCAGCTCCAGGCGA
TTCAGCAATGTTTTGAACTCAGATCTTCGCTCCGGGTCGTACTGAACGTT
GTCGGGCAACAGTTTCTTCCGGTCATCGAAGCACACGGACATGGTTGCCA
GTTCGAAGCGCGTGATCTCGGAGGAGAAGTGTCGCAGCTGCTGCTGGAGC
GATCCCTTCACCTGGTCCCCAGAGAACTTTGAGTTGGGGAAGAACAGCTC
GTTGGGGCGGAGTAGAAGGGTGAAGCCGGCGTGGTTCACATTCCGCAGCA
AGCAGTCCGTGAGTAATAGTTGATGGATTCGCGAACGTGTGCCATTGGAC
TGCTGGAAGGGAAAGTTAAAAGGCAGGCCATACAGATGAATGTTGGTGCG
CTCCAACAGGTGATGCACTTCCTCTGGCAGTTCGTCGTGGTTGTAGACCA
GGAAATTCTCTATTCCCAATGCCTGGTGGAACAGGAAGAACTGCAGCAAA
GCATTTTCATTACGTGCGAACTTGGAGGTCATGTTGAAGCCAACGAGATC
AACGCAAACGGTGGCTGGTAGTCGGTGCGCTACAGCTACCACCTTGTCGT
CGTCCTTCTTGCTCGCTGGTCTCANGTTTCGCAGACGCAGCCTCACTGGA
CTCCTGGTGGTTGTTATGTCCGTGAAGGAGACACTGCCGGGCTGACCGAA
ATCTCGG
BO06035.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:33:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-PA | 1350 | CG11127-RA | 459..1347 | 907..19 | 4426 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:04:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-RA | 1484 | CG11127-RA | 545..1433 | 907..19 | 4434 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:04:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7464048..7464936 | 907..19 | 4434 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:04:50 has no hits.
BO06035.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:38:00 Download gff for
BO06035.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-PA | 459..1350 | 18..907 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:06:09 Download gff for
BO06035.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-PA | 459..1350 | 18..907 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 05:57:40 Download gff for
BO06035.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 545..1439 | 10..907 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:07:32 Download gff for
BO06035.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 545..1439 | 10..907 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:07:32 Download gff for
BO06035.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7464048..7464942 | 10..907 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 05:57:40 Download gff for
BO06035.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3351553..3352447 | 10..907 | 99 | | Minus |
BO06035.5prime Sequence
907 bp (768 high quality bases) assembled on 2005-12-02
> BO06035.5prime
GAAGTTATCAGTCGACATGCGGAAATACCAGCAACTGGTGCTGCTGCTCA
TCTCCTGCCTCAGCGTCAGCATCCTGCTGATGTACAAGACCGAGAACAAT
CGCCTAAAGTACGTGCTCAAGTACGTCAACTTCTTCGGACGCAACGATGC
CGCTGTCCTCCGCCGCCTGGAGAACGGAACCAAGGAGGACGGGGCGCAGG
TGCTGTGGCGCCCTCTGCCCGTGTGGCAGGTGATCGGAGACTCCTTTCAT
GCCTACTCCGCCTTCTGGATGCGCAACGAACTGGTGGCCGGCGGCGAAGC
CCACGTTCTGGTGGTCGGAAAAAAGGGAGCAGTAGTCGACTTCCGGTGCA
GCTTGGACCTTCTGGGCGGACGCAGTGTGCAGGGAAAGTTTCGTTTTCAG
AGGGACTCCATTGAGAGCCTGGTGGATGACAAGTCTTCCAACTTCACCAG
CTATCACTTCTTCTGCCAGGTGAGCCGAGATTTCGGTCAGCCCGGCAGTG
TCTCCTTCACGGACATAACAACCACCAGGAGTCCAGTGAGGCTGCGTCTG
CGAAACCTGAGACCAGCGAGCAAGAAGGACGACGACAAGGTGGTAGCTGT
AGCGCACCGACTACCAGCCACCGTTTGCGTTGATCTCGTTGGCTTCAACA
TGACCTCCAAGTTCGCACGTAATGAAAATGCTTTGCTGCAGTTCTTCCTG
TTCCACCAGGCATTGGGAATAGAGAATTTCCTGGTCTACAACCACGACGA
ACTGCCAGAGGAAGTGCATCACCTGTTGGAGCGCACCAACATTCATCTGT
ATGGCCTGCCTTTTAACTTTCCCTTCCAGCAGTCCAATGGCACACGTTCG
CGAATCAATCAACTATTACTCACGGACTGCTTGCTGCGGAATGTGAACCA
CGCCGGC
BO06035.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:33:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-PA | 1350 | CG11127-RA | 1..891 | 17..907 | 4430 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:43:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-RA | 1484 | CG11127-RA | 87..977 | 17..907 | 4440 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:43:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7463590..7464480 | 17..907 | 4440 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-13 00:43:57 has no hits.
BO06035.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:38:01 Download gff for
BO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-PA | 1..891 | 17..907 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:06:10 Download gff for
BO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-PA | 1..891 | 17..907 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:14:03 Download gff for
BO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 82..977 | 13..907 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:51:14 Download gff for
BO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 82..977 | 13..907 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:51:14 Download gff for
BO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7463585..7464480 | 13..907 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:14:03 Download gff for
BO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3351090..3351985 | 13..907 | 99 | | Plus |
BO06035.complete Sequence
1381 bp (1381 high quality bases) assembled on 2005-10-20
GenBank Submission: FJ630242
> BO06035.complete
GAAGTTATCAGTCGACATGCGGAAATACCAGCAACTGGTGCTGCTGCTCA
TCTCCTGCCTCAGCGTCAGCATCCTGCTGATGTACAAGACCGAGAACAAT
CGCCTAAAGTACGTGCTCAAGTACGTCAACTTCTTCGGACGCAACGATGC
CGCTGTCCTCCGCCGCCTGGAGAACGGAACCAAGGAGGACGGGGCGCAGG
TGCTGTGGCGCCCTCTGCCCGTGTGGCAGGTGATCGGAGACTCCTTTCAT
GCCTACTCCGCCTTCTGGATGCGCAACGAACTGGTGGCCGGCGGCGAAGC
CCACGTTCTGGTGGTCGGAAAAAAGGGAGCAGTAGTCGACTTCCGGTGCA
GCTTGGACCTTCTGGGCGGACGCAGTGTGCAGGGAAAGTTTCGTTTTCAG
AGGGACTCCATTGAGAGCCTGGTGGATGACAAGTCTTCCAACTTCACCAG
CTATCACTTCTTCTGCCAGGTGAGCCGAGATTTCGGTCAGCCCGGCAGTG
TCTCCTTCACGGACATAACAACCACCAGGAGTCCAGTGAGGCTGCGTCTG
CGAAACCTGAGACCAGCGAGCAAGAAGGACGACGACAAGGTGGTAGCTGT
AGCGCACCGACTACCAGCCACCGTTTGCGTTGATCTCGTTGGCTTCAACA
TGACCTCCAAGTTCGCACGTAATGAAAATGCTTTGCTGCAGTTCTTCCTG
TTCCACCAGGCATTGGGAATAGAGAATTTCCTGGTCTACAACCACGACGA
ACTGCCAGAGGAAGTGCATCACCTGTTGGAGCGCACCAACATTCATCTGT
ATGGCCTGCCTTTTAACTTTCCCTTCCAGCAGTCCAATGGCACACGTTCG
CGAATCCATCAACTATTACTCACGGACTGCTTGCTGCGGAATGTGAACCA
CGCCGGCTTCACCCTTCTACTCCGCCCCAACGAGCTGTTCTTCCCCAACT
CAAAGTTCTCTGGGGACCAGGTGAAGGGATCGCTCCAGCAGCAGCTGCGA
CACTTCTCCTCCGAGATCACGCGCTTCGAACTGGCAACCATGTCCGTGTG
CTTCGATGACCGGAAGAAACTGTTGCCCGACAACGTTCAGTACGACCCGG
AGCGAAGATCTGAGTTCAAAACATTGCTGAATCGCCTGGAGCTGCCGCCG
GCGCAGCTCTTGGCCAGTACATCCGATGTGGAACTATCGTTATCAACCGG
ATTCGTGCACCGCTACGTGGACTGCGACCATGTGGGCAGCGATGGCCTGC
ACGACTGGCGCAACGCAGTTCGCGAGGACTTTATGGAACACATCAATGTG
CTCCGCAACGAGGTGGAGCTACTCATCCAGGAGCGTACGTTAAGGTTGAG
ATTTAAATACATGGCAAGCTTTCTAGACCAT
BO06035.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:56:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-RA | 1350 | CG11127-PA | 1..1347 | 17..1363 | 6735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-RA | 1484 | CG11127-RA | 87..1433 | 17..1363 | 6735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7463590..7464936 | 17..1363 | 6735 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:56:42 has no hits.
BO06035.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:27:34 Download gff for
BO06035.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 1..1350 | 17..1364 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:53:05 Download gff for
BO06035.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 215..1572 | 13..1372 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:39:28 Download gff for
BO06035.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 87..1433 | 17..1365 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:27:34 Download gff for
BO06035.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 215..1572 | 13..1372 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:14:20 Download gff for
BO06035.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11127-RA | 87..1433 | 17..1365 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:14:20 Download gff for
BO06035.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7463590..7464936 | 17..1365 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:39:28 Download gff for
BO06035.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3351095..3352441 | 17..1365 | 99 | | Plus |
BO06035.pep Sequence
Translation from 16 to 1381
> BO06035.pep
MRKYQQLVLLLISCLSVSILLMYKTENNRLKYVLKYVNFFGRNDAAVLRR
LENGTKEDGAQVLWRPLPVWQVIGDSFHAYSAFWMRNELVAGGEAHVLVV
GKKGAVVDFRCSLDLLGGRSVQGKFRFQRDSIESLVDDKSSNFTSYHFFC
QVSRDFGQPGSVSFTDITTTRSPVRLRLRNLRPASKKDDDKVVAVAHRLP
ATVCVDLVGFNMTSKFARNENALLQFFLFHQALGIENFLVYNHDELPEEV
HHLLERTNIHLYGLPFNFPFQQSNGTRSRIHQLLLTDCLLRNVNHAGFTL
LLRPNELFFPNSKFSGDQVKGSLQQQLRHFSSEITRFELATMSVCFDDRK
KLLPDNVQYDPERRSEFKTLLNRLELPPAQLLASTSDVELSLSTGFVHRY
VDCDHVGSDGLHDWRNAVREDFMEHINVLRNEVELLIQERTLRLRFKYMA
SFLDH
BO06035.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:43:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11127-PA | 449 | CG11127-PA | 1..449 | 1..449 | 2341 | 100 | Plus |
