Clone BO06044 Report

Search the DGRC for BO06044

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:60
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG2767-RA
Protein status:BO06044.pep: validated full length
Sequenced Size:1021

Clone Sequence Records

BO06044.3prime Sequence

821 bp (738 high quality bases) assembled on 2005-12-02

> BO06044.3prime
ATGGTCTAGAAAGCTTGCGTTCGTGTACTGATTCTTGAAGGTAAACTCAG
GATGCCTTTCCACACCATGGAAGAATGCAAAGTCACAGATTCGAATATTC
TGGTCCAGGCTAGACAACTTGGCCACCTCCTCGGCCGTCAGTTCGAAATC
GAAGACGTCCAGATTCTGTTTAAGGCGAGCGGGATTCGTGCTCTTGGGAA
TGGCGGATACACCAGTGTCGATAATCCAGCGGAGGAGGACCTGCGCTGGC
GTCTTGCCATGGCTTGCGGCAATCTCCTTCACCTCAGGGATGTCCATCAG
GTCCGGCAGATCTCTCACGATGCCCGCTCCAGCATTAAACTTGGCGATTC
CCTTGGATCCCAACGGGGAGTAGGCAGTTACGGTAATGTTTTCGGACTTG
CAGAAGTCGACCAGATCTCGCTGCTGCAAATAAACGTGGTGCTCAATCTG
GTTGTTGGCCGGCCGGATCTTGCAGTTCTTCAACAGACGGGCCACCTGAT
CCTTGCTGAAGTTGGATACCCCAATGGACTTGGTGAGACCCTTCTCCACC
AGGGCCTCCATAGCAACCCAGATGGCTGCGTGGTTCGTGGTAACGTCGAC
CTCCATTAGGCCCTCCTTGTCGAGCTTAAAGCTTCCGTCCTCGTTGATAT
TAATTGTGAAGGGAGTGTGCACCAAATATAAGTCCACATAGTCCAGTTGC
AGATCTTCCAGTGACTTTTTGATGGTTGGCTCAACTTCGTGGGGGCGGTT
GGAAACGGGTGGCACCTTGGTCACAATGAACAGCTCCTCCCGCTTGACCT
TGCCGGCGTCCAGCCAACGCT

BO06044.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:33:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG2767-PA 990 CG2767-RA 185..987 821..19 4015 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:53:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG2767-RA 1309 CG2767-RA 328..1130 821..19 4015 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:53:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8006217..8006783 65..631 2820 99.8 Plus
3R 32079331 3R 8006837..8006964 625..752 640 100 Plus
3R 32079331 3R 8007332..8007400 753..821 345 100 Plus
3R 32079331 3R 8006103..8006149 19..65 235 100 Plus
Blast to na_te.dros performed on 2015-02-13 00:53:11 has no hits.

BO06044.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:38:18 Download gff for BO06044.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-PA 185..990 15..821 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:06:33 Download gff for BO06044.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-PA 185..990 15..821 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:27:55 Download gff for BO06044.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 328..1133 15..821 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:59:51 Download gff for BO06044.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 328..1133 15..821 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:59:51 Download gff for BO06044.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 8006099..8006148 15..64 96 <- Plus
3R 8006217..8006776 65..624 100 <- Plus
3R 8006837..8006964 625..752 100 <- Plus
3R 8007332..8007400 753..821 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:27:55 Download gff for BO06044.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3831821..3831870 15..64 96 <- Plus
arm_3R 3831939..3832498 65..624 100 <- Plus
arm_3R 3832559..3832686 625..752 100 <- Plus
arm_3R 3833054..3833122 753..821 100   Plus

BO06044.5prime Sequence

895 bp (771 high quality bases) assembled on 2005-12-02

> BO06044.5prime
GAAGTTATCAGTCGACATGGTCAACACCAAGTTCTTAACGTTCAACAATG
GAGAGAAGATGCCCGTGATTGGCATCGGCACCTGGCAGGCATCTGATGAG
GAAATCGAAACCGCCATCGATGCGGCTTTGGAAGCTGGGTATCGCCACAT
AGATACGGCGCCAGTCTACGGCAATGAGAAGGCCATCGGAAGAGTCCTAA
AGCGTTGGCTGGACGCCGGCAAGGTCAAGCGGGAGGAGCTGTTCATTGTG
ACCAAGGTGCCACCCGTTTCCAACCGCCCCCACGAAGTTGAGCCAACCAT
CAAAAAGTCACTGGAAGATCTGCAACTGGACTATGTGGACTTATATTTGG
TGCACACTCCCTTCACAATTAATATCAACGAGGACGGAAGCTTTAAGCTC
GACAAGGAGGGCCTAATGGAGGTCGACGTTACCACGAACCACGCAGCCAT
CTGGGTTGCTATGGAGGCCCTGGTGGAGAAGGGTCTCACCAAGTCCATTG
GGGTATCCAACTTCAGCAAGGATCAGGTGGCCCGTCTGTTGAAGAACTGC
AAGATCCGGCCGGCCAACAACCAGATTGAGCACCACGTTTATTTGCAGCA
GCGAGATCTGGTCGACTTCTGCAAGTCCGAAAACATTACCGTAACTGCCT
ACTCCCCGTTGGGATCCAAGGGAATCGCCAAGTTTAATGCTGGAGCGGGC
ATCGTGAGAGATCTGCCGGACCTGATGGACATCCCTGAGGTGAAGGAGAT
TGCCGCAAGCCATGGCAAGACGCCAGCGCAGGTCCTCCTCCGCTGGATTA
TCGACACTGGTGTATCCGCCATTCCCAAGAGCACGAATCCCGCTCGCCTT
AAACAGAATCTGGACGTCTTCAATTTCAAACTGACGGCCCGAGAG

BO06044.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG2767-PA 990 CG2767-RA 1..873 17..889 4315 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:50:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG2767-RA 1309 CG2767-RA 144..1016 17..889 4335 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:50:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8006285..8006783 889..391 2450 99.4 Minus
3R 32079331 3R 8007332..8007516 269..85 925 100 Minus
3R 32079331 3R 8006837..8006964 397..270 640 100 Minus
3R 32079331 3R 8007895..8007967 89..17 365 100 Minus
Blast to na_te.dros performed on 2015-02-13 15:50:04 has no hits.

BO06044.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:38:19 Download gff for BO06044.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-PA 1..877 17..895 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:06:34 Download gff for BO06044.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-PA 1..877 17..895 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:06:12 Download gff for BO06044.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 133..1020 7..895 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:16:48 Download gff for BO06044.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 133..1020 7..895 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:16:48 Download gff for BO06044.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 8006279..8006776 398..895 99 <- Minus
3R 8006837..8006964 270..397 100 <- Minus
3R 8007332..8007512 89..269 100 <- Minus
3R 8007896..8007978 7..88 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:06:12 Download gff for BO06044.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3832001..3832498 398..895 99 <- Minus
arm_3R 3832559..3832686 270..397 100 <- Minus
arm_3R 3833054..3833234 89..269 100 <- Minus
arm_3R 3833618..3833700 7..88 95   Minus

BO06044.complete Sequence

1021 bp (1021 high quality bases) assembled on 2005-10-20

GenBank Submission: FJ630249

> BO06044.complete
GAAGTTATCAGTCGACATGGTCAACACCAAGTTCTTAACGTTCAACAATG
GAGAGAAGATGCCCGTGATTGGCATCGGCACCTGGCAGGCATCTGATGAG
GAAATCGAAACCGCCATCGATGCGGCTTTGGAAGCTGGGTATCGCCACAT
AGATACGGCGCCAGTCTACGGCAATGAGAAGGCCATCGGAAGAGTCCTAA
AGCGTTGGCTGGACGCCGGCAAGGTCAAGCGGGAGGAGCTGTTCATTGTG
ACCAAGGTGCCACCCGTTTCCAACCGCCCCCACGAAGTTGAGCCAACCAT
CAAAAAGTCACTGGAAGATCTGCAACTGGACTATGTGGACTTATATTTGG
TGCACACTCCCTTCACAATTAATATCAACGAGGACGGAAGCTTTAAGCTC
GACAAGGAGGGCCTAATGGAGGTCGACGTTACCACGAACCACGCAGCCAT
CTGGGTTGCTATGGAGGCCCTGGTGGAGAAGGGTCTCACCAAGTCCATTG
GGGTATCCAACTTCAGCAAGGATCAGGTGGCCCGTCTGTTGAAGAACTGC
AAGATCCGGCCGGCCAACAACCAGATTGAGCACCACGTTTATTTGCAGCA
GCGAGATCTGGTCGACTTCTGCAAGTCCGAAAACATTACCGTAACTGCCT
ACTCCCCGTTGGGATCCAAGGGAATCGCCAAGTTTAATGCTGGAGCGGGC
ATCGTGAGAGATCTGCCGGACCTGATGGACATCCCTGAGGTGAAGGAGAT
TGCCGCAAGCCATGGCAAGACGCCAGCGCAGGTCCTCCTCCGCTGGATTA
TCGACACTGGTGTATCCGCCATTCCCAAGAGCACGAATCCCGCTCGCCTT
AAACAGAATCTGGACGTCTTCGATTTCGAACTGACGGCCGAGGAGGTGGC
CAAGTTGTCTAGCCTGGACCAGAATATTCGAATCTGTGACTTTGCATTCT
TCCATGGTGTGGAAAGGCATCCTGAGTTTACCTTCAAGAATCAGTACACG
AACGCAAGCTTTCTAGACCAT

BO06044.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:09:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG2767-RA 990 CG2767-PA 1..987 17..1003 4935 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:09:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG2767-RA 1309 CG2767-RA 144..1130 17..1003 4935 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:09:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8006217..8006783 957..391 2820 99.8 Minus
3R 32079331 3R 8007332..8007516 269..85 925 100 Minus
3R 32079331 3R 8006837..8006964 397..270 640 100 Minus
3R 32079331 3R 8007895..8007967 89..17 365 100 Minus
3R 32079331 3R 8006103..8006149 1003..957 235 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:09:47 has no hits.

BO06044.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:27:24 Download gff for BO06044.complete
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 1..990 17..1007 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:52:50 Download gff for BO06044.complete
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 142..1142 7..1007 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:46:40 Download gff for BO06044.complete
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 144..1130 17..1005 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:27:24 Download gff for BO06044.complete
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 142..1142 7..1007 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:15:30 Download gff for BO06044.complete
Subject Subject Range Query Range Percent Splice Strand
CG2767-RA 144..1130 17..1005 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:15:30 Download gff for BO06044.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8007332..8007512 89..269 100 <- Minus
3R 8007896..8007967 17..88 100   Minus
3R 8006837..8006964 270..397 100 <- Minus
3R 8006101..8006148 958..1005 95 <- Minus
3R 8006217..8006776 398..957 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:46:40 Download gff for BO06044.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3831823..3831870 958..1005 95 <- Minus
arm_3R 3831939..3832498 398..957 100 <- Minus
arm_3R 3832559..3832686 270..397 100 <- Minus
arm_3R 3833054..3833234 89..269 100 <- Minus
arm_3R 3833618..3833689 17..88 100   Minus

BO06044.pep Sequence

Translation from 16 to 1021

> BO06044.pep
MVNTKFLTFNNGEKMPVIGIGTWQASDEEIETAIDAALEAGYRHIDTAPV
YGNEKAIGRVLKRWLDAGKVKREELFIVTKVPPVSNRPHEVEPTIKKSLE
DLQLDYVDLYLVHTPFTININEDGSFKLDKEGLMEVDVTTNHAAIWVAME
ALVEKGLTKSIGVSNFSKDQVARLLKNCKIRPANNQIEHHVYLQQRDLVD
FCKSENITVTAYSPLGSKGIAKFNAGAGIVRDLPDLMDIPEVKEIAASHG
KTPAQVLLRWIIDTGVSAIPKSTNPARLKQNLDVFDFELTAEEVAKLSSL
DQNIRICDFAFFHGVERHPEFTFKNQYTNASFLDH

BO06044.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:44:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG2767-PA 329 CG2767-PA 1..329 1..329 1705 100 Plus
CG6084-PA 316 CG6084-PA 8..310 9..319 622 42.8 Plus
CG6084-PD 316 CG6084-PD 8..316 9..327 616 42 Plus
CG10638-PD 317 CG10638-PD 10..317 10..327 604 40.4 Plus
CG10638-PA 317 CG10638-PA 10..317 10..327 604 40.4 Plus