Clone BO06045 Report

Search the DGRC for BO06045

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:60
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG9436-RA
Protein status:BO06045.pep: validated full length
Sequenced Size:967

Clone Sequence Records

BO06045.3prime Sequence

891 bp (796 high quality bases) assembled on 2005-12-02

> BO06045.3prime
ATGGTCTAGAAAGCTTGCGAACTCGTCGTTGAACGGGTAGTACTTATGGC
CCGACATTCCCGAAAAGGGTACCGTGCGCTGCCCGGTGTGATACTGCTCC
ATGCCGGCGACGTCGTCTGGACTCAGCTCGAAGTCGAAGACGCGGAAGTT
CTCCTCGATGCGGGCCTTGTTCGACGACTTGGGCAGTGGCACCACGCCTA
GCTGGACCAGATAACGCAGGCAGATCTGTGCCGTGGTGCGGCCGTACTTC
TTGGCCAGATTCTGGGCATGCTCGTCGTAGAGGAAGGGCGGCCACTGCCG
AGCGGGCTGGGGACGTGCCAGGGGGCAGTAGGCGCAGATGACCAGTCCGT
GGCGCTTGGCATGCTCCCGGAGCTGGCGCTGCTGAAAGCCTGGGTGGCAC
TCCACCTGGTTCACTACCGGCCGGATGCGGCAGTTGGCTAGCACTCGCTC
CGTCTGCGCGGCGTTGAAGTTGGACAGGCCGATGCTGCGCGTCAGGCCCA
GATCCACCAGCTTCTCCATCTCGCGCCAGGTGTCCAGATAGTCCACGTCC
GTCAGCTCCAGGGTTCCGTGCACGTTGCTGTCATTGTGGAACTTCTGGCC
CACCGGCATGTGCATCAGGTAGAGGTCTACGTATTCCAAACCCAGGTTGC
TAAGGCTCAGGCGGCAGGCGCGCTCCACCAATGCAGGGTCGTGGTGGATT
CCGCCTAGCTTGGTGGTCACGAAAACCTCCTCGCGTGTGACCACTCCCTC
GGCGATCTTCTCGGAGATCGCCTGGCCCACCTCAGCCTCGTTCTCGTAGA
CGAAGGCGGTGTCCCAGTGCCGGTAGCCCACGTCGAGGGCGTGGCGCGTT
GAGTGGTAGGCGTCCGACTCGAACGACTTCCAGGTGCCAAG

BO06045.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:33:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG9436-PA 936 CG9436-RA 61..933 891..19 4315 99.7 Minus
CG10863-PA 951 CG10863-RA 433..476 534..491 145 93.1 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:10:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG9436-RA 1303 CG9436-RA 193..1065 891..19 4335 99.8 Minus
CG10863-RA 1089 CG10863-RA 466..537 534..463 210 86.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:10:48
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6757839..6758711 19..891 4335 99.8 Plus
3L 28110227 3L 3941683..3941754 463..534 210 86.1 Plus
Blast to na_te.dros performed on 2015-02-11 16:10:51 has no hits.

BO06045.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:38:20 Download gff for BO06045.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9436-PA 61..936 18..891 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:06:35 Download gff for BO06045.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9436-PA 61..936 18..891 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:38:14 Download gff for BO06045.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9436-RA 193..1065 19..891 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:38:37 Download gff for BO06045.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9436-RA 193..1065 19..891 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:38:37 Download gff for BO06045.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 6757839..6758711 19..891 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:38:14 Download gff for BO06045.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2645344..2646216 19..891 99   Plus

BO06045.5prime Sequence

934 bp (782 high quality bases) assembled on 2005-12-02

> BO06045.5prime
GAAGTTATCAGTCGACATGACCAATCTGGCTCCCACCATCCGGCTGAACA
ACGGGCGCGAGATGCCAACTCTGGGCCTTGGCACCTGGAAGTCGTTCGAG
TCGGACGCCTACCACTCAACGCGCCACGCCCTCGACGTGGGCTACCGGCA
CCTGGACACCGCCTTCGTCTACGAGAACGAGGCTGAGGTGGGCCAGGCGA
TCTCCGAGAAGATCGCCGAGGGAGTGGTCACACGCGAGGAGGTTTTCGTG
ACCACCAAGCTAGGCGGAATCCACCACGACCCTGCATTGGTGGAGCGCGC
CTGCCGCCTGAGCCTTAGCAACCTGGGTTTGGAATACGTAGACCTCTACC
TGATGCACATGCCGGTGGGCCAGAAGTTCCACAATGACAGCAACGTGCAC
GGAACCCTGGAGCTGACGGACGTGGACTATCTGGACACCTGGCGCGAGAT
GGAGAAGCTGGTGGATCTGGGCCTGACGCGCAGCATCGGCCTGTCCAACT
TCAACGCCGCGCAGACGGAGCGAGTGCTAGCCAACTGCCGCATCCGGCCG
GTAGTGAACCAGGTGGAGTGCCACCCAGGCTTTCAGCAGCGCCAGCTCCG
GGAGCATGCCAAGCGCCACGGACTGGTCATCTGCGCCTACTGCCCCCTGG
CACGTCCCCAGCCCGCTCGGCAGTGGCCGCCCTTCCTCTACGACGAGCAT
GCCCAGAATCTGGCCAAGAAGTACGGCCGCACCACGGCACAGATCTGCCT
GCGTTATCTGGTCCAGCTAGGCGTGGTGCCACTGCCCCAGTCGTCGAACA
AGGCCCGCATCGAGGAGAACTTCCGCGTCTTCGACTTCGAGCTGAGTCCA
GACGACGTCGCCGGCATGGAGCAGTATCACACCGGGCAGCGCACGGTACC
CTTTTCGGGGATGTCGGGGCATAAGTACTACCCG

BO06045.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:33:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG9436-PA 936 CG9436-RA 1..918 17..934 4515 99.6 Plus
CG10863-PA 951 CG10863-RA 433..476 434..477 145 93.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:51:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG9436-RA 1303 CG9436-RA 133..1050 17..934 4545 99.7 Plus
CG10863-RA 1089 CG10863-RA 466..537 434..505 210 86.1 Plus
CG12766-RA 1075 CG12766-RA 152..289 124..261 180 76.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:51:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6757854..6758771 934..17 4545 99.7 Minus
3L 28110227 3L 3941683..3941754 505..434 210 86.1 Minus
Blast to na_te.dros performed on 2015-02-04 19:51:08 has no hits.

BO06045.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:38:21 Download gff for BO06045.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9436-PA 1..918 17..934 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:06:37 Download gff for BO06045.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9436-PA 1..918 17..934 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:20:53 Download gff for BO06045.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9436-RA 133..1050 17..934 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:43:18 Download gff for BO06045.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9436-RA 133..1050 17..934 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:43:18 Download gff for BO06045.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 6757854..6758771 17..934 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:20:53 Download gff for BO06045.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2645359..2646276 17..934 99   Minus

BO06045.complete Sequence

967 bp (967 high quality bases) assembled on 2005-10-20

GenBank Submission: FJ630250

> BO06045.complete
GAAGTTATCAGTCGACATGACCAATCTGGCTCCCACCATCCGGCTGAACA
ACGGGCGCGAGATGCCAACTCTGGGCCTTGGCACCTGGAAGTCGTTCGAG
TCGGACGCCTACCACTCAACGCGCCACGCCCTCGACGTGGGCTACCGGCA
CCTGGACACCGCCTTCGTCTACGAGAACGAGGCTGAGGTGGGCCAGGCGA
TCTCCGAGAAGATCGCCGAGGGAGTGGTCACACGCGAGGAGGTTTTCGTG
ACCACCAAGCTAGGCGGAATCCACCACGACCCTGCATTGGTGGAGCGCGC
CTGCCGCCTGAGCCTTAGCAACCTGGGTTTGGAATACGTAGACCTCTACC
TGATGCACATGCCGGTGGGCCAGAAGTTCCACAATGACAGCAACGTGCAC
GGAACCCTGGAGCTGACGGACGTGGACTATCTGGACACCTGGCGCGAGAT
GGAGAAGCTGGTGGATCTGGGCCTGACGCGCAGCATCGGCCTGTCCAACT
TCAACGCCGCGCAGACGGAGCGAGTGCTAGCCAACTGCCGCATCCGGCCG
GTAGTGAACCAGGTGGAGTGCCACCCAGGCTTTCAGCAGCGCCAGCTCCG
GGAGCATGCCAAGCGCCACGGACTGGTCATCTGCGCCTACTGCCCCCTGG
CACGTCCCCAGCCCGCTCGGCAGTGGCCGCCCTTCCTCTACGACGAGCAT
GCCCAGAATCTGGCCAAGAAGTACGGCCGCACCACGGCACAGATCTGCCT
GCGTTATCTGGTCCAGCTAGGCGTGGTGCCACTGCCCAAGTCGTCGAACA
AGGCCCGCATCGAGGAGAACTTCCGCGTCTTCGACTTCGAGCTGAGTCCA
GACGACGTCGCCGGCATGGAGCAGTATCACACCGGGCAGCGCACGGTACC
CTTTTCGGGAATGTCGGGCCATAAGTACTACCCGTTCAACGACGAGTTCG
CAAGCTTTCTAGACCAT

BO06045.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:47:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG9436-RA 936 CG9436-PA 1..933 17..949 4665 100 Plus
CG10863-RA 951 CG10863-PA 433..504 434..505 210 86.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:47:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG9436-RA 1303 CG9436-RA 133..1065 17..949 4665 100 Plus
CG10863-RA 1089 CG10863-RA 466..537 434..505 210 86.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:47:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6757839..6758771 949..17 4665 100 Minus
3L 28110227 3L 3941683..3941754 505..434 210 86.1 Minus
Blast to na_te.dros performed on 2014-11-27 06:47:25 has no hits.

BO06045.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:27:25 Download gff for BO06045.complete
Subject Subject Range Query Range Percent Splice Strand
CG9436-RA 1..936 17..950 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:52:52 Download gff for BO06045.complete
Subject Subject Range Query Range Percent Splice Strand
CG9436-RA 129..1061 17..949 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:54:19 Download gff for BO06045.complete
Subject Subject Range Query Range Percent Splice Strand
CG9436-RA 133..1065 17..951 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:27:25 Download gff for BO06045.complete
Subject Subject Range Query Range Percent Splice Strand
CG9436-RA 116..1048 17..949 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:54:26 Download gff for BO06045.complete
Subject Subject Range Query Range Percent Splice Strand
CG9436-RA 133..1065 17..951 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:54:26 Download gff for BO06045.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6757837..6758771 17..951 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:54:19 Download gff for BO06045.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2645342..2646276 17..951 99   Minus

BO06045.pep Sequence

Translation from 16 to 967

> BO06045.pep
MTNLAPTIRLNNGREMPTLGLGTWKSFESDAYHSTRHALDVGYRHLDTAF
VYENEAEVGQAISEKIAEGVVTREEVFVTTKLGGIHHDPALVERACRLSL
SNLGLEYVDLYLMHMPVGQKFHNDSNVHGTLELTDVDYLDTWREMEKLVD
LGLTRSIGLSNFNAAQTERVLANCRIRPVVNQVECHPGFQQRQLREHAKR
HGLVICAYCPLARPQPARQWPPFLYDEHAQNLAKKYGRTTAQICLRYLVQ
LGVVPLPKSSNKARIEENFRVFDFELSPDDVAGMEQYHTGQRTVPFSGMS
GHKYYPFNDEFASFLDH

BO06045.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:44:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG9436-PA 311 CG9436-PA 1..311 1..311 1661 100 Plus
CG10638-PD 317 CG10638-PD 3..317 4..311 950 57.1 Plus
CG10638-PA 317 CG10638-PA 3..317 4..311 950 57.1 Plus
CG10863-PA 316 CG10863-PA 1..316 1..311 910 51.9 Plus
CG12766-PA 320 CG12766-PA 12..320 11..314 835 50.5 Plus