Clone BO06069 Report

Search the DGRC for BO06069

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:60
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG8206-RA
Protein status:BO06069.pep: validated full length
Sequenced Size:607

Clone Sequence Records

BO06069.5prime Sequence

605 bp (604 high quality bases) assembled on 2005-12-02

> BO06069.5prime
GAAGTTATCAGTCGACATGAACGCATTGCGCAACATCTTCACATCGCGAA
CTCTCAACTATTTGCGCCAGAATGGACAAAACGCGATCCTCAACGCCACC
CAGCAGCAACAAGCGGTGGACGCCGTGCCGCTAACCAACGATGCCGAGCA
GCACCTAAAATCGTCGCGTCCAGCACCGCTTTCCATACCGCGCTCCATAC
TCGATGCGTGCCATTTCACGGCCAAGCAGTTTGACCTGGGAGGCTCCACG
TCCGGAAACCAGGCGAATGGCTCTCTGTCGCCGACGACACTGAAGCGCTT
CCGACGCATGCAACGCCGCATGGAGCTGGTGTACCGCTGCAAGCTGTGCA
ACACCCGCAACACGAAGACCATCAGCGAAGAGGCCTACTACAGCGGCGTG
GTGATCCTACAGTGCGACGGCTGTGCCGTCGACCATCTGATCAAGGACAA
TCTGGGACTGTTCACCGGCAGCGATGGCGATAGCAGCATTAGCTCTGGAA
TCAGTACCAGCAAGAATATCGACCAGGTGCTGGCCGACCGGCATGCCCGC
GTCCGGGTGATCAAGGTGAACGAGCGCGGCGAGCTGATTGCAAGCTTTCT
AGACC

BO06069.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:34:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG8206-PA 576 CG8206-RA 1..573 17..589 2865 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:12:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG8206-RB 1188 CG8206-RB 174..746 17..589 2865 100 Plus
CG8206-RA 1013 CG8206-RA 174..746 17..589 2865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:12:30
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15739403..15739975 17..589 2865 100 Plus
Blast to na_te.dros performed 2015-02-12 16:12:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 2481..2526 155..200 113 71.7 Plus
TART-C 11124 TART-C TARTC 11124bp 3933..3978 155..200 113 71.7 Plus

BO06069.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:39:06 Download gff for BO06069.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8206-PA 1..576 17..590 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:07:41 Download gff for BO06069.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8206-PA 1..576 17..590 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:12:11 Download gff for BO06069.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8206-RA 168..746 9..589 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:26:33 Download gff for BO06069.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8206-RA 168..746 9..589 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:26:33 Download gff for BO06069.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15739397..15739975 9..589 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:12:11 Download gff for BO06069.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15633430..15634008 9..589 99   Plus

BO06069.3prime Sequence

605 bp (604 high quality bases) assembled on 2005-12-02

> BO06069.3prime
ATGGTCTAGAAAGCTTGCAATCAGCTCGCCGCGCTCGTTCACCTTGATCA
CCCGGACGCGGGCATGCCGGTCGGCCAGCACCTGGTCGATATTCTTGCTG
GTACTGATTCCAGAGCTAATGCTGCTATCGCCATCGCTGCCGGTGAACAG
TCCCAGATTGTCCTTGATCAGATGGTCGACGGCACAGCCGTCGCACTGTA
GGATCACCACGCCGCTGTAGTAGGCCTCTTCGCTGATGGTCTTCGTGTTG
CGGGTGTTGCACAGCTTGCAGCGGTACACCAGCTCCATGCGGCGTTGCAT
GCGTCGGAAGCGCTTCAGTGTCGTCGGCGACAGAGAGCCATTCGCCTGGT
TTCCGGACGTGGAGCCTCCCAGGTCAAACTGCTTGGCCGTGAAATGGCAC
GCATCGAGTATGGAGCGCGGTATGGAAAGCGGTGCTGGACGCGACGATTT
TAGGTGCTGCTCGGCATCGTTGGTTAGCGGCACGGCGTCCACCGCTTGTT
GCTGCTGGGTGGCGTTGAGGATCGCGTTTTGTCCATTCTGGCGCAAATAG
TTGAGAGTTCGCGATGTGAAGATGTTGCGCAATGCGTTCATGTCGACTGA
TAACT

BO06069.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:34:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG8206-PA 576 CG8206-RA 1..573 591..19 2865 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:50:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG8206-RB 1188 CG8206-RB 174..746 591..19 2865 100 Minus
CG8206-RA 1013 CG8206-RA 174..746 591..19 2865 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15739403..15739975 591..19 2865 100 Minus
Blast to na_te.dros performed 2015-02-13 15:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 2481..2526 453..408 113 71.7 Minus
TART-C 11124 TART-C TARTC 11124bp 3933..3978 453..408 113 71.7 Minus

BO06069.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:39:05 Download gff for BO06069.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8206-PA 1..576 18..591 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:07:40 Download gff for BO06069.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8206-PA 1..576 18..591 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:06:22 Download gff for BO06069.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8206-RA 168..746 19..599 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:21:00 Download gff for BO06069.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8206-RA 168..746 19..599 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:21:00 Download gff for BO06069.3prime
Subject Subject Range Query Range Percent Splice Strand
X 15739397..15739975 19..599 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:06:22 Download gff for BO06069.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15633430..15634008 19..599 99   Minus

BO06069.complete Sequence

607 bp (607 high quality bases) assembled on 2005-10-20

GenBank Submission: FJ630269

> BO06069.complete
GAAGTTATCAGTCGACATGAACGCATTGCGCAACATCTTCACATCGCGAA
CTCTCAACTATTTGCGCCAGAATGGACAAAACGCGATCCTCAACGCCACC
CAGCAGCAACAAGCGGTGGACGCCGTGCCGCTAACCAACGATGCCGAGCA
GCACCTAAAATCGTCGCGTCCAGCACCGCTTTCCATACCGCGCTCCATAC
TCGATGCGTGCCATTTCACGGCCAAGCAGTTTGACCTGGGAGGCTCCACG
TCCGGAAACCAGGCGAATGGCTCTCTGTCGCCGACGACACTGAAGCGCTT
CCGACGCATGCAACGCCGCATGGAGCTGGTGTACCGCTGCAAGCTGTGCA
ACACCCGCAACACGAAGACCATCAGCGAAGAGGCCTACTACAGCGGCGTG
GTGATCCTACAGTGCGACGGCTGTGCCGTCGACCATCTGATCAAGGACAA
TCTGGGACTGTTCACCGGCAGCGATGGCGATAGCAGCATTAGCTCTGGAA
TCAGTACCAGCAAGAATATCGACCAGGTGCTGGCCGACCGGCATGCCCGC
GTCCGGGTGATCAAGGTGAACGAGCGCGGCGAGCTGATTGCAAGCTTTCT
AGACCAT

BO06069.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:00:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG8206-RB 576 CG8206-PB 1..573 17..589 2865 100 Plus
CG8206-RA 576 CG8206-PA 1..573 17..589 2865 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:00:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG8206-RB 1188 CG8206-RB 174..746 17..589 2865 100 Plus
CG8206-RA 1013 CG8206-RA 174..746 17..589 2865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:00:27
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15739403..15739975 17..589 2865 100 Plus
Blast to na_te.dros performed 2014-11-28 01:00:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 2481..2526 155..200 113 71.7 Plus
TART-C 11124 TART-C TARTC 11124bp 3933..3978 155..200 113 71.7 Plus

BO06069.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:27:10 Download gff for BO06069.complete
Subject Subject Range Query Range Percent Splice Strand
CG8206-RA 1..576 17..590 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:52:29 Download gff for BO06069.complete
Subject Subject Range Query Range Percent Splice Strand
CG8206-RA 152..730 9..589 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:04:25 Download gff for BO06069.complete
Subject Subject Range Query Range Percent Splice Strand
CG8206-RA 174..746 17..591 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:27:10 Download gff for BO06069.complete
Subject Subject Range Query Range Percent Splice Strand
CG8206-RA 152..730 9..589 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:52 Download gff for BO06069.complete
Subject Subject Range Query Range Percent Splice Strand
CG8206-RA 174..746 17..591 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:52 Download gff for BO06069.complete
Subject Subject Range Query Range Percent Splice Strand
X 15739403..15739975 17..591 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:04:25 Download gff for BO06069.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15633436..15634008 17..591 99   Plus

BO06069.pep Sequence

Translation from 16 to 607

> BO06069.pep
MNALRNIFTSRTLNYLRQNGQNAILNATQQQQAVDAVPLTNDAEQHLKSS
RPAPLSIPRSILDACHFTAKQFDLGGSTSGNQANGSLSPTTLKRFRRMQR
RMELVYRCKLCNTRNTKTISEEAYYSGVVILQCDGCAVDHLIKDNLGLFT
GSDGDSSISSGISTSKNIDQVLADRHARVRVIKVNERGELIASFLDH

BO06069.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:44:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG8206-PB 191 CG8206-PB 1..191 1..191 974 100 Plus
CG8206-PA 191 CG8206-PA 1..191 1..191 974 100 Plus
CG12379-PB 174 CG12379-PB 87..159 97..179 194 44.6 Plus