Clone Sequence Records
BO06069.5prime Sequence
605 bp (604 high quality bases) assembled on 2005-12-02
> BO06069.5prime
GAAGTTATCAGTCGACATGAACGCATTGCGCAACATCTTCACATCGCGAA
CTCTCAACTATTTGCGCCAGAATGGACAAAACGCGATCCTCAACGCCACC
CAGCAGCAACAAGCGGTGGACGCCGTGCCGCTAACCAACGATGCCGAGCA
GCACCTAAAATCGTCGCGTCCAGCACCGCTTTCCATACCGCGCTCCATAC
TCGATGCGTGCCATTTCACGGCCAAGCAGTTTGACCTGGGAGGCTCCACG
TCCGGAAACCAGGCGAATGGCTCTCTGTCGCCGACGACACTGAAGCGCTT
CCGACGCATGCAACGCCGCATGGAGCTGGTGTACCGCTGCAAGCTGTGCA
ACACCCGCAACACGAAGACCATCAGCGAAGAGGCCTACTACAGCGGCGTG
GTGATCCTACAGTGCGACGGCTGTGCCGTCGACCATCTGATCAAGGACAA
TCTGGGACTGTTCACCGGCAGCGATGGCGATAGCAGCATTAGCTCTGGAA
TCAGTACCAGCAAGAATATCGACCAGGTGCTGGCCGACCGGCATGCCCGC
GTCCGGGTGATCAAGGTGAACGAGCGCGGCGAGCTGATTGCAAGCTTTCT
AGACC
BO06069.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:34:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8206-PA | 576 | CG8206-RA | 1..573 | 17..589 | 2865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:12:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8206-RB | 1188 | CG8206-RB | 174..746 | 17..589 | 2865 | 100 | Plus |
CG8206-RA | 1013 | CG8206-RA | 174..746 | 17..589 | 2865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:12:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15739403..15739975 | 17..589 | 2865 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 16:12:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 2481..2526 | 155..200 | 113 | 71.7 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 3933..3978 | 155..200 | 113 | 71.7 | Plus |
BO06069.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:39:06 Download gff for
BO06069.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-PA | 1..576 | 17..590 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:07:41 Download gff for
BO06069.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-PA | 1..576 | 17..590 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:12:11 Download gff for
BO06069.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-RA | 168..746 | 9..589 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:26:33 Download gff for
BO06069.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-RA | 168..746 | 9..589 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:26:33 Download gff for
BO06069.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15739397..15739975 | 9..589 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:12:11 Download gff for
BO06069.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15633430..15634008 | 9..589 | 99 | | Plus |
BO06069.3prime Sequence
605 bp (604 high quality bases) assembled on 2005-12-02
> BO06069.3prime
ATGGTCTAGAAAGCTTGCAATCAGCTCGCCGCGCTCGTTCACCTTGATCA
CCCGGACGCGGGCATGCCGGTCGGCCAGCACCTGGTCGATATTCTTGCTG
GTACTGATTCCAGAGCTAATGCTGCTATCGCCATCGCTGCCGGTGAACAG
TCCCAGATTGTCCTTGATCAGATGGTCGACGGCACAGCCGTCGCACTGTA
GGATCACCACGCCGCTGTAGTAGGCCTCTTCGCTGATGGTCTTCGTGTTG
CGGGTGTTGCACAGCTTGCAGCGGTACACCAGCTCCATGCGGCGTTGCAT
GCGTCGGAAGCGCTTCAGTGTCGTCGGCGACAGAGAGCCATTCGCCTGGT
TTCCGGACGTGGAGCCTCCCAGGTCAAACTGCTTGGCCGTGAAATGGCAC
GCATCGAGTATGGAGCGCGGTATGGAAAGCGGTGCTGGACGCGACGATTT
TAGGTGCTGCTCGGCATCGTTGGTTAGCGGCACGGCGTCCACCGCTTGTT
GCTGCTGGGTGGCGTTGAGGATCGCGTTTTGTCCATTCTGGCGCAAATAG
TTGAGAGTTCGCGATGTGAAGATGTTGCGCAATGCGTTCATGTCGACTGA
TAACT
BO06069.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:34:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8206-PA | 576 | CG8206-RA | 1..573 | 591..19 | 2865 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:50:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8206-RB | 1188 | CG8206-RB | 174..746 | 591..19 | 2865 | 100 | Minus |
CG8206-RA | 1013 | CG8206-RA | 174..746 | 591..19 | 2865 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:50:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15739403..15739975 | 591..19 | 2865 | 100 | Minus |
Blast to na_te.dros performed 2015-02-13 15:50:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 2481..2526 | 453..408 | 113 | 71.7 | Minus |
TART-C | 11124 | TART-C TARTC 11124bp | 3933..3978 | 453..408 | 113 | 71.7 | Minus |
BO06069.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:39:05 Download gff for
BO06069.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-PA | 1..576 | 18..591 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:07:40 Download gff for
BO06069.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-PA | 1..576 | 18..591 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:06:22 Download gff for
BO06069.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-RA | 168..746 | 19..599 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:21:00 Download gff for
BO06069.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-RA | 168..746 | 19..599 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:21:00 Download gff for
BO06069.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15739397..15739975 | 19..599 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:06:22 Download gff for
BO06069.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15633430..15634008 | 19..599 | 99 | | Minus |
BO06069.complete Sequence
607 bp (607 high quality bases) assembled on 2005-10-20
GenBank Submission: FJ630269
> BO06069.complete
GAAGTTATCAGTCGACATGAACGCATTGCGCAACATCTTCACATCGCGAA
CTCTCAACTATTTGCGCCAGAATGGACAAAACGCGATCCTCAACGCCACC
CAGCAGCAACAAGCGGTGGACGCCGTGCCGCTAACCAACGATGCCGAGCA
GCACCTAAAATCGTCGCGTCCAGCACCGCTTTCCATACCGCGCTCCATAC
TCGATGCGTGCCATTTCACGGCCAAGCAGTTTGACCTGGGAGGCTCCACG
TCCGGAAACCAGGCGAATGGCTCTCTGTCGCCGACGACACTGAAGCGCTT
CCGACGCATGCAACGCCGCATGGAGCTGGTGTACCGCTGCAAGCTGTGCA
ACACCCGCAACACGAAGACCATCAGCGAAGAGGCCTACTACAGCGGCGTG
GTGATCCTACAGTGCGACGGCTGTGCCGTCGACCATCTGATCAAGGACAA
TCTGGGACTGTTCACCGGCAGCGATGGCGATAGCAGCATTAGCTCTGGAA
TCAGTACCAGCAAGAATATCGACCAGGTGCTGGCCGACCGGCATGCCCGC
GTCCGGGTGATCAAGGTGAACGAGCGCGGCGAGCTGATTGCAAGCTTTCT
AGACCAT
BO06069.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:00:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8206-RB | 576 | CG8206-PB | 1..573 | 17..589 | 2865 | 100 | Plus |
CG8206-RA | 576 | CG8206-PA | 1..573 | 17..589 | 2865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:00:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8206-RB | 1188 | CG8206-RB | 174..746 | 17..589 | 2865 | 100 | Plus |
CG8206-RA | 1013 | CG8206-RA | 174..746 | 17..589 | 2865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:00:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15739403..15739975 | 17..589 | 2865 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 01:00:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 2481..2526 | 155..200 | 113 | 71.7 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 3933..3978 | 155..200 | 113 | 71.7 | Plus |
BO06069.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:27:10 Download gff for
BO06069.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-RA | 1..576 | 17..590 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:52:29 Download gff for
BO06069.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-RA | 152..730 | 9..589 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:04:25 Download gff for
BO06069.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-RA | 174..746 | 17..591 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:27:10 Download gff for
BO06069.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-RA | 152..730 | 9..589 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:52 Download gff for
BO06069.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8206-RA | 174..746 | 17..591 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:52 Download gff for
BO06069.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15739403..15739975 | 17..591 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:04:25 Download gff for
BO06069.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15633436..15634008 | 17..591 | 99 | | Plus |
BO06069.pep Sequence
Translation from 16 to 607
> BO06069.pep
MNALRNIFTSRTLNYLRQNGQNAILNATQQQQAVDAVPLTNDAEQHLKSS
RPAPLSIPRSILDACHFTAKQFDLGGSTSGNQANGSLSPTTLKRFRRMQR
RMELVYRCKLCNTRNTKTISEEAYYSGVVILQCDGCAVDHLIKDNLGLFT
GSDGDSSISSGISTSKNIDQVLADRHARVRVIKVNERGELIASFLDH
BO06069.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:44:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8206-PB | 191 | CG8206-PB | 1..191 | 1..191 | 974 | 100 | Plus |
CG8206-PA | 191 | CG8206-PA | 1..191 | 1..191 | 974 | 100 | Plus |
CG12379-PB | 174 | CG12379-PB | 87..159 | 97..179 | 194 | 44.6 | Plus |