Clone Sequence Records
BO06127.3prime Sequence
353 bp (352 high quality bases) assembled on 2005-12-02
> BO06127.3prime
ATGGTCTAGAAAGCTTGCCGCCTTCACCAGCTTGGCCATCATGTTGGTCA
GCTTGTGCTCGTCGGCGCCGGCAAAGGAGGCCAAGCGTCGATTTTGGCGC
AAAAAGACAAACGTTGGCATGCTGCGCACCTTGTAGCGCTCCGTCAGCTC
CTCGAATTTGTCCACATCGATCTTGAGCACCACCGCCTTGCTGGAGTATT
TTCTGGCCAGCGATTTGACGGTGCTCTCCATTTCCTTGCAGGGACCACAC
CATGTCGCATAGAAATCCAGCACGATTAGCTTGTCGTCGGCCGCCTCGAT
GCGCTTGTGATAGTCGTTCATGGTGCGTACGGATGCCATGTCGACTGATA
ACT
BO06127.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:35:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4193-PA | 324 | dhd-RA | 1..321 | 339..19 | 1605 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:29:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dhd-RB | 952 | CG4193-RB | 290..610 | 339..19 | 1605 | 100 | Minus |
| dhd-RA | 772 | CG4193-RA | 107..427 | 339..19 | 1605 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:29:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5312460..5312780 | 339..19 | 1605 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:29:11 has no hits.
BO06127.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:40:45 Download gff for
BO06127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dhd-PA | 1..324 | 15..339 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:10:07 Download gff for
BO06127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4193-PA | 1..324 | 15..339 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:57:57 Download gff for
BO06127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dhd-RA | 100..432 | 13..347 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:09:11 Download gff for
BO06127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dhd-RA | 100..432 | 13..347 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:09:11 Download gff for
BO06127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5312453..5312785 | 13..347 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:57:57 Download gff for
BO06127.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5206486..5206818 | 13..347 | 98 | | Minus |
BO06127.5prime Sequence
353 bp (352 high quality bases) assembled on 2005-12-02
> BO06127.5prime
GAAGTTATCAGTCGACATGGCATCCGTACGCACCATGAACGACTATCACA
AGCGCATCGAGGCGGCCGACGACAAGCTAATCGTGCTGGATTTCTATGCG
ACATGGTGTGGTCCCTGCAAGGAAATGGAGAGCACCGTCAAATCGCTGGC
CAGAAAATACTCCAGCAAGGCGGTGGTGCTCAAGATCGATGTGGACAAAT
TCGAGGAGCTGACGGAGCGCTACAAGGTGCGCAGCATGCCAACGTTTGTC
TTTTTGCGCCAAAATCGACGCTTGGCCTCCTTTGCCGGCGCCGACGAGCA
CAAGCTGACCAACATGATGGCCAAGCTGGTGAAGGCGGCAAGCTTTCTAG
ACC
BO06127.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:35:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4193-PA | 324 | dhd-RA | 1..321 | 17..337 | 1605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:27:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dhd-RB | 952 | CG4193-RB | 290..610 | 17..337 | 1605 | 100 | Plus |
| dhd-RA | 772 | CG4193-RA | 107..427 | 17..337 | 1605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:26:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5312460..5312780 | 17..337 | 1605 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 01:26:58 has no hits.
BO06127.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:40:46 Download gff for
BO06127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dhd-PA | 1..324 | 17..341 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:10:08 Download gff for
BO06127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4193-PA | 1..324 | 17..341 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:43:07 Download gff for
BO06127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dhd-RA | 100..432 | 9..343 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:44:31 Download gff for
BO06127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dhd-RA | 100..432 | 9..343 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:44:31 Download gff for
BO06127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5312453..5312785 | 9..343 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:43:07 Download gff for
BO06127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5206486..5206818 | 9..343 | 98 | | Plus |
BO06127.complete Sequence
355 bp assembled on 2007-06-21
GenBank Submission: FJ630291
> BO06127.complete
GAAGTTATCAGTCGACATGGCATCCGTACGCACCATGAACGACTATCACA
AGCGCATCGAGGCGGCCGACGACAAGCTAATCGTGCTGGATTTCTATGCG
ACATGGTGTGGTCCCTGCAAGGAAATGGAGAGCACCGTCAAATCGCTGGC
CAGAAAATACTCCAGCAAGGCGGTGGTGCTCAAGATCGATGTGGACAAAT
TCGAGGAGCTGACGGAGCGCTACAAGGTGCGCAGCATGCCAACGTTTGTC
TTTTTGCGCCAAAATCGACGCTTGGCCTCCTTTGCCGGCGCCGACGAGCA
CAAGCTGACCAACATGATGGCCAAGCTGGTGAAGGCGGCAAGCTTTCTAG
ACCAT
BO06127.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:10:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dhd-RB | 324 | CG4193-PB | 1..321 | 17..337 | 1605 | 100 | Plus |
| dhd-RA | 324 | CG4193-PA | 1..321 | 17..337 | 1605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:10:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dhd-RB | 952 | CG4193-RB | 290..610 | 17..337 | 1605 | 100 | Plus |
| dhd-RA | 772 | CG4193-RA | 107..427 | 17..337 | 1605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:10:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5312460..5312780 | 17..337 | 1605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:10:16 has no hits.
BO06127.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:23:09 Download gff for
BO06127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dhd-RA | 1..324 | 17..341 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:56:56 Download gff for
BO06127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dhd-RA | 81..413 | 9..343 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:04:17 Download gff for
BO06127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dhd-RA | 107..427 | 17..339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:23:09 Download gff for
BO06127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dhd-RA | 81..413 | 9..343 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:21 Download gff for
BO06127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dhd-RA | 107..427 | 17..339 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:21 Download gff for
BO06127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5312460..5312780 | 17..339 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:04:17 Download gff for
BO06127.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5206493..5206813 | 17..339 | 99 | | Plus |
BO06127.pep Sequence
Translation from 16 to 355
> BO06127.pep
MASVRTMNDYHKRIEAADDKLIVLDFYATWCGPCKEMESTVKSLARKYSS
KAVVLKIDVDKFEELTERYKVRSMPTFVFLRQNRRLASFAGADEHKLTNM
MAKLVKAASFLDH
BO06127.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:41:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dhd-PB | 107 | CG4193-PB | 1..107 | 1..107 | 545 | 100 | Plus |
| dhd-PA | 107 | CG4193-PA | 1..107 | 1..107 | 545 | 100 | Plus |
| TrxT-PB | 157 | CG3315-PB | 5..104 | 4..103 | 251 | 46 | Plus |
| TrxT-PA | 157 | CG3315-PA | 5..104 | 4..103 | 251 | 46 | Plus |
| Trx-2-PA | 106 | CG31884-PA | 5..102 | 4..101 | 224 | 40.8 | Plus |
