Clone Sequence Records
BO06128.3prime Sequence
936 bp (746 high quality bases) assembled on 2005-12-02
> BO06128.3prime
ATGGTCTAGAAAGCTTGCCAGCTTCTCGATGAGAATGGAGGAGGCTCCAC
CGCCGCCATTGCAAATGGAGGCGCATCCCAGCTCGCCCTTCTTCAGGCTG
TGCGAAAGATGGGCCACCAGACGGGCTCCGGACATGCCGATTGGATGGCC
AATTGACACGGCACCTCCATGAACATTAACCTTGGCTGGATCCACATCCA
GTTTCTTGATATTGGCCAAAACGACCAGGGAGAAGGCCTCATTGACCTCC
CACATGGCCACGTCTTCCTTGCGAACGCCGGCACGCTTCAGTAATTTGGG
AATGGCCAGAGCTGGGGCAATGGGGAAGTCAATGGGATCGGTCTCCGCAT
CCTGGAAGGCCACAATCCTGGCCAGCGGCTTAATGCCCGCCTTCTGGGCT
GCCTCGGCACTCATCAAAACCACGGCGGCACCGCCATCATTCAAGGTGGA
TGCATTTCCGGCTGTCACAGTGCCATTTTCCCTTTGGAAAACGGTGGCCA
ACTGTCCAAACTTGTCAAAATTCACCCGCTTGTACTCCTCATCCTCTGAG
ATGACGATCTCCGGCTTCCTCTTCTGCTGAATCTTCACCGGGGCAATCTC
GTCCTGGAACACCTTGTTGGCCCACGCGGCAGCCGATCTCTTGTATGATT
CAATGGCAAAGTCATCCTGCTGCTGACGTGTGATCTCCAGTTTTTTGGCC
GTATTTTCGGCACAGTTGCCCATGTGGAACTTGTTGTACACATCCCAGAG
GCCATCGAANACAATGCCGTCGGTGAGATTGACGCCGCCATAGGGCGTGG
CTCCCCTCTTCAGATAGTAGGGAACATTCGACATGGACTCCATACCGCCG
GCAAACGACACATCAGCATAGCCGAGCATCAGGGATTGGGCGCCCAGCAT
AACGGGCTTCATGCCCGACGAGCACACCTTGTTCAC
BO06128.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:35:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-PA | 1233 | CG10932-RA | 395..1230 | 854..19 | 4161 | 99.8 | Minus |
| CG10932-PA | 1233 | CG10932-RA | 313..390 | 936..859 | 365 | 98.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:05:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-RB | 1656 | CG10932-RB | 428..1345 | 936..19 | 4519 | 99.6 | Minus |
| CG10932-RA | 1517 | CG10932-RA | 428..1345 | 936..19 | 4519 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:04:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7887441..7888358 | 19..936 | 4504 | 99.3 | Plus |
Blast to na_te.dros performed on 2015-02-09 19:05:03 has no hits.
BO06128.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:40:47 Download gff for
BO06128.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-PA | 313..1233 | 15..936 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:10:10 Download gff for
BO06128.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-PA | 313..1233 | 15..936 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:04:26 Download gff for
BO06128.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 428..1350 | 14..936 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:17:09 Download gff for
BO06128.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 428..1350 | 14..936 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:17:09 Download gff for
BO06128.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7887436..7888358 | 14..936 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:04:26 Download gff for
BO06128.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7781469..7782391 | 14..936 | 99 | | Plus |
BO06128.5prime Sequence
854 bp (717 high quality bases) assembled on 2005-12-02
> BO06128.5prime
GAAGTTATCAGTCGACATGTCCGCCCGACTGCTGCAGGCCACGCGTCGCT
GGAGCGCCCATCGCAACTACAGCTCCAAAATCGCCGAAGTTGTGGTGGTT
TCGGCAGCCCGCACACCAATTGGCAGCTTCCAAAGTCAATTGGCCCCACT
GACGGCTACCCAATTGGGAGCCCGTGCCATCGAGGCGGCCATCGAAAAGG
CCGGAATTGCGAAGACCGATGTCCAGGAGGTGATTATGGGCAATGTGGTA
TCTGCTGGTCTGGGACAGGCCCCCGCCCGTCAGGCTGCCATCTTCGCCGG
ACTGCCCACCAATGTATGCTGCACCACGGTGAACAAGGTGTGCTCGTCGG
GCATGAAGGCCGTTATGCTGGGCGCCCAATCCCTGATGCTCGGCTATGCT
GATGTGGTCGTTGCCGGCGGTATGGAGTCCATGTCGAATGTTCCCTACTA
TCTGAAGAGGGGAGCCACGCCCTATGGCGGCGTCAATCTCACCGACGGCA
TTGTTTTCGATGGCCTCTGGGATGTGTACAACAAGTTCCACATGGGCAAC
TGTGCCGAAAATACGGCCAAAAAACTGGAGATCACACGTCAGCAGCAGGA
TGACTTTGCCATTGAATCATACAAGAGATCGGCTGCCGCGTGGGCCAACA
AGGTGTTCCAGGACGAGATTGCCCCGGTGAAGATTCAGCAGAAGAGGAAG
CCGGAGATCGTCATCTCAGAGGATGAGGAGTACAAGCGGGTGAATTTTGA
CAAGTTTGGACAGTTGGCCACCGTTTTCCAAAGGGAAAATGGCACTGTGA
CAGCCGGAAATGCATCCACCTTGAATGATGGCGGTGCCGCCGTGGTTTTG
ATGA
BO06128.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:35:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-PA | 1233 | CG10932-RA | 1..838 | 17..854 | 4190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:15:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-RB | 1656 | CG10932-RB | 116..953 | 17..854 | 4190 | 100 | Plus |
| CG10932-RA | 1517 | CG10932-RA | 116..953 | 17..854 | 4190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:15:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7887833..7888670 | 854..17 | 4190 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 16:15:34 has no hits.
BO06128.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:40:48 Download gff for
BO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-PA | 1..837 | 17..853 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:10:11 Download gff for
BO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-PA | 1..837 | 17..853 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:12:23 Download gff for
BO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 116..952 | 17..853 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:29:55 Download gff for
BO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 116..952 | 17..853 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:29:55 Download gff for
BO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7887834..7888670 | 17..853 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:12:23 Download gff for
BO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7781867..7782703 | 17..853 | 100 | | Minus |
BO06128.complete Sequence
1264 bp (1264 high quality bases) assembled on 2005-10-20
GenBank Submission: FJ630292
> BO06128.complete
GAAGTTATCAGTCGACATGTCCGCCCGACTGCTGCAGGCCACGCGTCGCT
GGAGCGCCCATCGCAACTACAGCTCCAAAATCGCCGAAGTTGTGGTGGTT
TCGGCAGCCCGCACACCAATTGGCAGCTTCCAAAGTCAATTGGCCCCACT
GACGGCTACCCAATTGGGAGCCCGTGCCATCGAGGCGGCCATCGAAAAGG
CCGGAATTGCGAAGACCGATGTCCAGGAGGTGATTATGGGCAATGTGGTA
TCTGCTGGTCTGGGACAGGCCCCCGCCCGTCAGGCTGCCATCTTCGCCGG
ACTGCCCACCAATGTATGCTGCACCACGGTGAACAAGGTGTGCTCGTCGG
GCATGAAGGCCGTTATGCTGGGCGCCCAATCCCTGATGCTCGGCTATGCT
GATGTGGTCGTTGCCGGCGGTATGGAGTCCATGTCGAATGTTCCCTACTA
TCTGAAGAGGGGAGCCACGCCCTATGGCGGCGTCAATCTCACCGACGGCA
TTGTTTTCGATGGCCTCTGGGATGTGTACAACAAGTTCCACATGGGCAAC
TGTGCCGAAAATACGGCCAAAAAACTGGAGATCACACGTCAGCAGCAGGA
TGACTTTGCCATTGAATCATACAAGAGATCGGCTGCCGCGTGGGCCAACA
AGGTGTTCCAGGACGAGATTGCCCCGGTGAAGATTCAGCAGAAGAGGAAG
CCGGAGATCGTCATCTCAGAGGATGAGGAGTACAAGCGGGTGAATTTTGA
CAAGTTTGGACAGTTGGCCACCGTTTTCCAAAGGGAAAATGGCACTGTGA
CAGCCGGAAATGCATCCACCTTGAATGATGGCGGTGCCGCCGTGGTTTTG
ATGAGTGCCGAGGCAGCCCAGAAGGCGGGCATTAAGCCGCTGGCCAGGAT
TGTGGCCTTCCAGGATGCGGAGACCGATCCCATTGACTTCCCCATTGCCC
CAGCTCTGGCCATTCCCAAATTACTGAAGCGTGCCGGCGTTCGCAAGGAA
GACGTGGCCATGTGGGAGGTCAATGAGGCCTTCTCCCTGGTCGTTTTGGC
CAATATCAAGAAACTGGATGTGGATCCAGCCAAGGTTAATGTTCATGGAG
GTGCCGTGTCAATTGGCCATCCAATCGGCATGTCCGGAGCCCGTCTGGTG
GCCCATCTTTCGCACAGCCTGAAGAAGGGCGAGCTGGGATGCGCCTCCAT
TTGCAATGGCGGCGGTGGAGCCTCCTCCATTCTCATCGAGAAGCTGGCAA
GCTTTCTAGACCAT
BO06128.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:24:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-RB | 1233 | CG10932-PB | 1..1230 | 17..1246 | 6150 | 100 | Plus |
| CG10932-RA | 1233 | CG10932-PA | 1..1230 | 17..1246 | 6150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:24:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-RB | 1656 | CG10932-RB | 116..1345 | 17..1246 | 6150 | 100 | Plus |
| CG10932-RA | 1517 | CG10932-RA | 116..1345 | 17..1246 | 6150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:24:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7887441..7888670 | 1246..17 | 6150 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:24:06 has no hits.
BO06128.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:26:23 Download gff for
BO06128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 1..1233 | 17..1250 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:51:28 Download gff for
BO06128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 83..1317 | 17..1251 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:10:25 Download gff for
BO06128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 116..1345 | 17..1248 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:26:23 Download gff for
BO06128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 83..1317 | 17..1251 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:17:41 Download gff for
BO06128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10932-RA | 116..1345 | 17..1248 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:17:41 Download gff for
BO06128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7887439..7888670 | 17..1248 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:10:25 Download gff for
BO06128.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7781472..7782703 | 17..1248 | 99 | | Minus |
BO06128.pep Sequence
Translation from 16 to 1264
> BO06128.pep
MSARLLQATRRWSAHRNYSSKIAEVVVVSAARTPIGSFQSQLAPLTATQL
GARAIEAAIEKAGIAKTDVQEVIMGNVVSAGLGQAPARQAAIFAGLPTNV
CCTTVNKVCSSGMKAVMLGAQSLMLGYADVVVAGGMESMSNVPYYLKRGA
TPYGGVNLTDGIVFDGLWDVYNKFHMGNCAENTAKKLEITRQQQDDFAIE
SYKRSAAAWANKVFQDEIAPVKIQQKRKPEIVISEDEEYKRVNFDKFGQL
ATVFQRENGTVTAGNASTLNDGGAAVVLMSAEAAQKAGIKPLARIVAFQD
AETDPIDFPIAPALAIPKLLKRAGVRKEDVAMWEVNEAFSLVVLANIKKL
DVDPAKVNVHGGAVSIGHPIGMSGARLVAHLSHSLKKGELGCASICNGGG
GASSILIEKLASFLDH
BO06128.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:42:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10932-PB | 410 | CG10932-PB | 1..410 | 1..410 | 2068 | 100 | Plus |
| CG10932-PA | 410 | CG10932-PA | 1..410 | 1..410 | 2068 | 100 | Plus |
| CG9149-PA | 392 | CG9149-PA | 1..392 | 22..411 | 755 | 42 | Plus |
| yip2-PA | 398 | CG4600-PA | 8..396 | 25..408 | 613 | 35.5 | Plus |
| Thiolase-PA | 469 | CG4581-PA | 44..462 | 25..409 | 441 | 29.1 | Plus |
