Clone BO06154 Report

Search the DGRC for BO06154

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:61
Well:54
Vector:pDNR-Dual
Associated Gene/TranscriptCG18812-RC
Protein status:BO06154.pep: validated full length
Sequenced Size:1654

Clone Sequence Records

BO06154.3prime Sequence

872 bp (755 high quality bases) assembled on 2005-12-02

> BO06154.3prime
ATGGTCTAGAAAGCTTGCCGAGGCAGTCGGCACAGGATTGAAGTAATGCA
GGCCATTGGTCGCCATGTCGTACTCGGTGATGTAGGCGGGAATTTCCAGC
TGATCCTTGGTGATGGCCGAGTACAGGTGCTCCACACCCGGAAGCGAGTG
CACCTTGGCCTTGATGGCAGGCGCCATGAACGTGGTGAACCACCAGGTCA
TCATCTTAGTCCAGAAAGTGGGGTGCACGATATAGAAGGCCTTCAGGTTC
TTCTTGTATTTGTAAGGCAACACACTGTAGACCTCACGCAGCCAGTGCAG
CGATGGATAGTTGTTCGTGGATGTCAGCGTGTGGAAGTACGAGATGACAT
AGTCTCCTTTAACGATGGGATCCAGTAGCTTAATCAGATATAGCAAGGCC
TTTTCCAGGTCAATGTTCTGGGCGGGGAACCATTTGCCGCAGAACACAAT
CACAGGCCGACCCAGGCGGTCCACGCCGCTCTGGTAAAGGCAGCCGATGC
CGGACACCTCCGTCAAATCCTCGACTTGGGCACGACGCAGTAGGCGCTCG
TATCTTTCCTGATGCTCAATGCCCTCGACTCCCTCGGAAATGACATTCTC
GTAAACTCCGGTGCGTGGTCGATCACTGAGCAGGTGCTGCCGGTCCAGAT
CGCGCTGAAGCTGAGCCTGCAATCCGCTGCTGTACGAATTCAGGCTGAGA
CCGTTCATATCCCGAGCTCCGTACTCCAGATCCGAACTATTGCCCTCCAT
GTCGTGTGGACTCACGTCTGAATCGTCGTCGGCTAAATGATGACGCATGT
GGACACTGTGCTGCGGATTGCGGATGATGCGTATCTGGCGATCGGGATCC
GGATGTTGCGGCTCCCCGAACT

BO06154.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:35:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG18812-PC 1623 CG18812-RC 767..1620 872..19 4270 100 Minus
CG18812-PB 735 CG18812-RB 1..732 750..19 3660 100 Minus
CG18812-PA 654 CG18812-RA 110..651 560..19 2710 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:29:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG18812-RC 2689 CG18812-RC 1017..1870 872..19 4270 100 Minus
CG18812-RF 2894 CG18812-RF 1240..2075 872..19 3990 97.9 Minus
CG18812-RD 1719 CG18812-RD 137..900 782..19 3820 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:29:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7719376..7719574 61..259 995 100 Plus
2R 25286936 2R 7719842..7719998 399..555 785 100 Plus
2R 25286936 2R 7719641..7719782 260..401 710 100 Plus
2R 25286936 2R 7725868..7725997 655..784 650 100 Plus
2R 25286936 2R 7725689..7725792 554..657 520 100 Plus
2R 25286936 2R 7727942..7728031 783..872 450 100 Plus
2R 25286936 2R 7719265..7719307 19..61 215 100 Plus
Blast to na_te.dros performed on 2015-02-12 10:29:34 has no hits.

BO06154.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:41:31 Download gff for BO06154.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18812-PC 767..1623 18..872 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:11:13 Download gff for BO06154.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18812-PC 767..1623 18..872 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:58:01 Download gff for BO06154.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18812-RC 1017..1870 19..872 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:10:06 Download gff for BO06154.3prime
Subject Subject Range Query Range Percent Splice Strand
CG18812-RC 1017..1870 19..872 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:10:06 Download gff for BO06154.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 7719641..7719780 260..399 100 <- Plus
2R 7719843..7719996 400..553 100 <- Plus
2R 7725689..7725789 554..654 100 <- Plus
2R 7725868..7725995 655..782 100 <- Plus
2R 7727942..7728031 783..872 100   Plus
2R 7719265..7719306 19..60 100 <- Plus
2R 7719376..7719574 61..259 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:58:01 Download gff for BO06154.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3606770..3606811 19..60 100 <- Plus
arm_2R 3606881..3607079 61..259 100 <- Plus
arm_2R 3607146..3607285 260..399 100 <- Plus
arm_2R 3607348..3607501 400..553 100 <- Plus
arm_2R 3613194..3613294 554..654 100 <- Plus
arm_2R 3613373..3613500 655..782 100 <- Plus
arm_2R 3615447..3615536 783..872 100   Plus

BO06154.5prime Sequence

721 bp (720 high quality bases) assembled on 2005-12-02

> BO06154.5prime
GAAGTTATCAGTCGACATGCGTCTCGACACGAACTCAAATGTGGACTTCA
AAGCATTCGAATCCAGCTCAAGCTCATGTCCTGTCAAATTGGATAACCTG
GCCACCTGGGGTGGCTCACAGAAAACAGACACACGACTGCCGATCACGGA
CTACTCCAATCTGGGCGGACCCCGGCACAATCGCAGTCCCTTTCCACTCT
GCAAAGATGTCAACAATCGCTTCGTAATCTGGGATGGGGACATGACCACT
CTGGAGGTGGACGCCATCACAAACACCAGCGATGAGACTCTGACTGAAAG
CAATAGCATATCGGAGCGCATCTTCGCAGTGGCTGGTAATCAGCTGCGCG
AGGAGCTGAGCACAACGGTTAAAGAATGCCGCACTGGCGATGTGCGCATC
ACGCGTGGATACAATCTGCCCGCCAAGTACGTGCTGCATACAGTGGCACC
TGCCTACAGGGAAAAGTTCAAGACGGCTGCCGAGAATACGCTGCACTGCT
GCTACAGAAATGTCCTGTGCAAGGCGAAGGAACTTAACCTGCACACCATC
GCCCTGTGCAACATCAGTGCCCACCAGAAGAGCTTTCCCGCGGATGTGGC
AGCCCACATTGCCCTGCGTACCATTCGTCGCTATCTGGACAAGTGCACCC
TGCAGGTTGTGATATTGTGCGTGGGCAGCAGCGAGCGCGGCACTTACGAG
GTCCTGGCCCCACTGTACTTC

BO06154.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:35:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG18812-PC 1623 CG18812-RC 1..705 17..721 3525 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:14:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG18812-RF 2894 CG18812-RF 474..1178 17..721 3525 100 Plus
CG18812-RC 2689 CG18812-RC 251..955 17..721 3525 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:14:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7729429..7729581 232..80 765 100 Minus
2R 25286936 2R 7729016..7729163 374..227 725 99.3 Minus
2R 25286936 2R 7728825..7728959 507..373 675 100 Minus
2R 25286936 2R 7728267..7728381 619..505 575 100 Minus
2R 25286936 2R 7728093..7728196 721..618 520 100 Minus
2R 25286936 2R 7729642..7729704 79..17 315 100 Minus
Blast to na_te.dros performed on 2015-02-11 16:14:45 has no hits.

BO06154.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:41:33 Download gff for BO06154.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18812-PC 1..705 17..721 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:11:15 Download gff for BO06154.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18812-PC 1..705 17..721 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:38:35 Download gff for BO06154.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18812-RC 247..955 10..721 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:39:14 Download gff for BO06154.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18812-RC 247..955 10..721 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:39:14 Download gff for BO06154.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7728269..7728378 508..617 100 <- Minus
2R 7728825..7728957 375..507 100 <- Minus
2R 7729016..7729158 232..374 100 <- Minus
2R 7729430..7729581 80..231 100 <- Minus
2R 7729642..7729715 4..79 93   Minus
2R 7728093..7728196 618..721 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:38:35 Download gff for BO06154.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3615774..3615883 508..617 100 <- Minus
arm_2R 3616330..3616462 375..507 100 <- Minus
arm_2R 3616521..3616663 232..374 100 <- Minus
arm_2R 3615598..3615701 618..721 100 <- Minus
arm_2R 3616935..3617086 80..231 100 <- Minus
arm_2R 3617147..3617220 4..79 93   Minus

BO06154.complete Sequence

1654 bp assembled on 2006-12-18

GenBank Submission: FJ630295

> BO06154.complete
GAAGTTATCAGTCGACATGCGTCTCGACACGAACTCAAATGTGGACTTCA
AAGCATTCGAATCCAGCTCAAGCTCATGTCCTGTCAAATTGGATAACCTG
GCCACCTGGGGTGGCTCACAGAAAACAGACACACGACTGCCGATCACGGA
CTACTCCAATCTGGGCGGACCCCGGCACAATCGCAGTCCCTTTCCACTCT
GCAAAGATGTCAACAATCGCTTCGTAATCTGGGATGGGGACATGACCACT
CTGGAGGTGGACGCCATCACAAACACCAGCGATGAGACTCTGACTGAAAG
CAATAGCATATCGGAGCGCATCTTCGCAGTGGCTGGTAATCAGCTGCGCG
AGGAGCTGAGCACAACGGTTAAAGAATGCCGCACTGGCGATGTGCGCATC
ACGCGTGGATACAATCTGCCCGCCAAGTACGTGCTGCATACAGTGGCACC
TGCCTACAGGGAAAAGTTCAAGACGGCTGCCGAGAATACGCTGCACTGCT
GCTACAGAAATGTCCTGTGCAAGGCGAAGGAACTTAACCTGCACACCATC
GCCCTGTGCAACATCAGTGCCCACCAGAAGAGCTTTCCCGCGGATGTGGC
AGCCCACATTGCCCTGCGTACCATTCGTCGCTATCTGGACAAGTGCACCC
TGCAGGTTGTGATATTGTGCGTGGGCAGCAGCGAGCGCGGCACTTACGAG
GTCCTGGCCCCACTGTACTTCCCCAGGGATCAGCTGGAGGAGCGCAGTGC
CCTGTGGCAGCTGCCCAAGGACATTGGCGGCGAGTTCGGGGAGCCGCAAC
ATCCGGATCCCGATCGCCAGATACGCATCATCCGCAATCCGCAGCACAGT
GTCCACATGCGTCATCATTTAGCCGACGACGATTCAGACGTGAGTCCACA
CGACATGGAGGGCAATAGTTCGGATCTGGAGTACGGAGCTCGGGATATGA
ACGGTCTCAGCCTGAATTCGTACAGCAGCGGATTGCAGGCTCAGCTTCAG
CGCGATCTGGACCGGCAGCACCTGCTCAGTGATCGACCACGCACCGGAGT
TTACGAGAATGTCATTTCCGAGGGAGTCGAGGGCATTGAGCATCAGGAAA
GATACGAGCGCCTACTGCGTCGTGCCCAAGTCGAGGATTTGACGGAGGTG
TCCGGCATCGGCTGCCTTTACCAGAGCGGCGTGGACCGCCTGGGTCGGCC
TGTGATTGTGTTCTGCGGCAAATGGTTCCCCGCCCAGAACATTGACCTGG
AAAAGGCCTTGCTATATCTGATTAAGCTACTGGATCCCATCGTTAAAGGA
GACTATGTCATCTCGTACTTCCACACGCTGACATCCACGAACAACTATCC
ATCGCTGCACTGGCTGCGTGAGGTCTACAGTGTGTTGCCTTACAAATACA
AGAAGAACCTGAAGGCCTTCTATATCGTGCACCCCACTTTCTGGACTAAG
ATGATGACCTGGTGGTTCACCACGTTCATGGCGCCTGCCATCAAGGCCAA
GGTGCACTCGCTTCCGGGTGTGGAGCACCTGTACTCGGCCATCACCAAGG
ATCAGCTGGAAATTCCCGCCTACATCACCGAGTACGACATGGCGACCAAT
GGCCTGCATTACTTCAATCCTGTGCCGACTGCCTCGGCAAGCTTTCTAGA
CCAT

BO06154.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:38:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG18812-RC 1623 CG18812-PC 1..1620 17..1636 8100 100 Plus
CG18812-RF 1605 CG18812-PF 1..1602 17..1636 7795 98.9 Plus
CG18812-RD 795 CG18812-PD 29..792 873..1636 3820 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:38:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG18812-RC 2689 CG18812-RC 251..1870 17..1636 8100 100 Plus
CG18812-RF 2894 CG18812-RF 474..2075 17..1636 7795 98.9 Plus
CG18812-RD 1719 CG18812-RD 137..900 873..1636 3820 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:38:29
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7727942..7728196 872..618 1275 100 Minus
2R 25286936 2R 7719376..7719574 1594..1396 995 100 Minus
2R 25286936 2R 7719842..7719998 1256..1100 785 100 Minus
2R 25286936 2R 7729429..7729581 232..80 765 100 Minus
2R 25286936 2R 7729016..7729163 374..227 725 99.3 Minus
2R 25286936 2R 7719641..7719782 1395..1254 710 100 Minus
2R 25286936 2R 7728825..7728959 507..373 675 100 Minus
2R 25286936 2R 7725868..7725997 1000..871 650 100 Minus
2R 25286936 2R 7728267..7728381 619..505 575 100 Minus
2R 25286936 2R 7725689..7725792 1101..998 520 100 Minus
2R 25286936 2R 7729642..7729704 79..17 315 100 Minus
2R 25286936 2R 7719265..7719307 1636..1594 215 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:38:30 has no hits.

BO06154.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:53:08 Download gff for BO06154.complete
Subject Subject Range Query Range Percent Splice Strand
CG18812-RC 1..1623 17..1637 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:01:32 Download gff for BO06154.complete
Subject Subject Range Query Range Percent Splice Strand
CG18812-RC 248..1867 17..1638 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:49 Download gff for BO06154.complete
Subject Subject Range Query Range Percent Splice Strand
CG18812-RC 251..1870 17..1638 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:53:08 Download gff for BO06154.complete
Subject Subject Range Query Range Percent Splice Strand
CG18812-RC 244..1867 10..1636 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:22:08 Download gff for BO06154.complete
Subject Subject Range Query Range Percent Splice Strand
CG18812-RC 251..1870 17..1638 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:22:08 Download gff for BO06154.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7729642..7729704 17..79 100   Minus
2R 7728825..7728957 375..507 100 <- Minus
2R 7729016..7729158 232..374 100 <- Minus
2R 7729430..7729581 80..231 100 <- Minus
2R 7719263..7719306 1595..1638 95 <- Minus
2R 7719376..7719574 1396..1594 100 <- Minus
2R 7719641..7719780 1256..1395 100 <- Minus
2R 7719843..7719996 1102..1255 100 <- Minus
2R 7725689..7725789 1001..1101 100 <- Minus
2R 7725868..7725995 873..1000 100 <- Minus
2R 7727942..7728196 618..872 100 <- Minus
2R 7728269..7728378 508..617 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:49 Download gff for BO06154.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3606768..3606811 1595..1638 95 <- Minus
arm_2R 3606881..3607079 1396..1594 100 <- Minus
arm_2R 3607146..3607285 1256..1395 100 <- Minus
arm_2R 3607348..3607501 1102..1255 100 <- Minus
arm_2R 3613194..3613294 1001..1101 100 <- Minus
arm_2R 3613373..3613500 873..1000 100 <- Minus
arm_2R 3615447..3615701 618..872 100 <- Minus
arm_2R 3615774..3615883 508..617 100 <- Minus
arm_2R 3616330..3616462 375..507 100 <- Minus
arm_2R 3616521..3616663 232..374 100 <- Minus
arm_2R 3616935..3617086 80..231 100 <- Minus
arm_2R 3617147..3617209 17..79 100   Minus

BO06154.pep Sequence

Translation from 16 to 1654

> BO06154.pep
MRLDTNSNVDFKAFESSSSSCPVKLDNLATWGGSQKTDTRLPITDYSNLG
GPRHNRSPFPLCKDVNNRFVIWDGDMTTLEVDAITNTSDETLTESNSISE
RIFAVAGNQLREELSTTVKECRTGDVRITRGYNLPAKYVLHTVAPAYREK
FKTAAENTLHCCYRNVLCKAKELNLHTIALCNISAHQKSFPADVAAHIAL
RTIRRYLDKCTLQVVILCVGSSERGTYEVLAPLYFPRDQLEERSALWQLP
KDIGGEFGEPQHPDPDRQIRIIRNPQHSVHMRHHLADDDSDVSPHDMEGN
SSDLEYGARDMNGLSLNSYSSGLQAQLQRDLDRQHLLSDRPRTGVYENVI
SEGVEGIEHQERYERLLRRAQVEDLTEVSGIGCLYQSGVDRLGRPVIVFC
GKWFPAQNIDLEKALLYLIKLLDPIVKGDYVISYFHTLTSTNNYPSLHWL
REVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFMAPAIKAKVHSLP
GVEHLYSAITKDQLEIPAYITEYDMATNGLHYFNPVPTASASFLDH

BO06154.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:22:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG18812-PC 540 CG18812-PC 1..540 1..540 2874 100 Plus
CG18812-PF 534 CG18812-PF 1..534 1..540 2826 98.9 Plus
CG18812-PD 264 CG18812-PD 10..264 286..540 1356 99.6 Plus
CG18812-PB 244 CG18812-PB 1..244 297..540 1298 100 Plus
CG18812-PA 217 CG18812-PA 37..217 360..540 973 99.4 Plus