Clone Sequence Records
BO06256.3prime Sequence
767 bp (766 high quality bases) assembled on 2005-12-03
> BO06256.3prime
ATGGTCTAGAAAGCTTGCGGACATGTCCTCGATGAGGGCCGCACGCAGCT
TGGTCGTCACTGTGGCGGGCTGTGCCTGGTTAAGCTTGAAGACGCTCTCG
ATCACGGAGATCTCTGTGGCCGTGGTGTTCATGCCCACGAAGGAGAGCCA
GTCGTTGACGACCATGCCGGCGGCGAGTACTTCGCTGCCCCGGTTCACTG
TTCCGGCCACGAGGGGAACCTGCAGCAGGGACGACAGTTCGTCCTGGTCC
TGAATGCTCGTCTTGGGATGCACCATGCCGCCCTGGTTGCTCAGCACGGC
GTAAGAGCCCACCAGTGAGTTGTCGGCAATGGTCTGGCGGAAGACCTCTA
CTTTGAGCACGTCCGCGATGATCTCCTCGGTCTCCTTGTCCAGATCCGGG
TGCACCAGGGCCACATAATCATTGCAGGCGATAACGTTGCCCAGCGCGGA
CAGGCGCTCCTCCACACGATAAATCTTCACGGCGTCTGGCAGGCTGTTAC
GCAGGTGTTGCAGCTCCTCGTCGGTGGTGGAGTTGGGCACCAGCAGGCCG
TTGCGGTTGCCCACGGTGAGGCGGCCGATGATCCGGCAGCCGCCCACATT
CGCATGCACCACCGGGATGGTGTCGCCCAGCTCCGCCTCGAAGGCGCTGT
AGAAGGTCTCGGATCCACCGATGGCCACCAGGCAGTATGTGTTGGTTAGT
TTAGTGAAGACGCCGATGTCGTCGTTGTTCTCGAATTGGACGCGTAGAGC
CATGTCGACTGATAACT
BO06256.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:37:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17611-PA | 738 | eIF6-RA | 1..735 | 753..19 | 3675 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:28:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF6-RA | 1056 | CG17611-RA | 230..964 | 753..19 | 3675 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:28:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23849338..23850072 | 19..753 | 3675 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 01:28:39 has no hits.
BO06256.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:44:27 Download gff for
BO06256.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-PA | 1..738 | 15..753 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:15:17 Download gff for
BO06256.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17611-PA | 1..738 | 15..753 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:43:31 Download gff for
BO06256.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-RA | 222..969 | 13..761 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:49:11 Download gff for
BO06256.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-RA | 222..969 | 13..761 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:49:11 Download gff for
BO06256.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23849333..23850080 | 13..761 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:43:31 Download gff for
BO06256.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19736856..19737603 | 13..761 | 99 | | Plus |
BO06256.5prime Sequence
767 bp (766 high quality bases) assembled on 2005-12-03
> BO06256.5prime
GAAGTTATCAGTCGACATGGCTCTACGCGTCCAATTCGAGAACAACGACG
ACATCGGCGTCTTCACTAAACTAACCAACACATACTGCCTGGTGGCCATC
GGTGGATCCGAGACCTTCTACAGCGCCTTCGAGGCGGAGCTGGGCGACAC
CATCCCGGTGGTGCATGCGAATGTGGGCGGCTGCCGGATCATCGGCCGCC
TCACCGTGGGCAACCGCAACGGCCTGCTGGTGCCCAACTCCACCACCGAC
GAGGAGCTGCAACACCTGCGTAACAGCCTGCCAGACGCCGTGAAGATTTA
TCGTGTGGAGGAGCGCCTGTCCGCGCTGGGCAACGTTATCGCCTGCAATG
ATTATGTGGCCCTGGTGCACCCGGATCTGGACAAGGAGACCGAGGAGATC
ATCGCGGACGTGCTCAAAGTAGAGGTCTTCCGCCAGACCATTGCCGACAA
CTCACTGGTGGGCTCTTACGCCGTGCTGAGCAACCAGGGCGGCATGGTGC
ATCCCAAGACGAGCATTCAGGACCAGGACGAACTGTCGTCCCTGCTGCAG
GTTCCCCTCGTGGCCGGAACAGTGAACCGGGGCAGCGAAGTACTCGCCGC
CGGCATGGTCGTCAACGACTGGCTCTCCTTCGTGGGCATGAACACCACGG
CCACAGAGATCTCCGTGATCGAGAGCGTCTTCAAGCTTAACCAGGCACAG
CCCGCCACAGTGACGACCAAGCTGCGTGCGGCCCTCATCGAGGACATGTC
CGCAAGCTTTCTAGACC
BO06256.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:37:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17611-PA | 738 | eIF6-RA | 1..735 | 17..751 | 3675 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:03:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF6-RA | 1056 | CG17611-RA | 230..964 | 17..751 | 3675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:03:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23849338..23850072 | 751..17 | 3675 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:03:39 has no hits.
BO06256.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:44:28 Download gff for
BO06256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-PA | 1..738 | 17..755 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:15:18 Download gff for
BO06256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17611-PA | 1..738 | 17..755 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:15:33 Download gff for
BO06256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-RA | 222..969 | 9..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:52:28 Download gff for
BO06256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-RA | 222..969 | 9..757 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:52:28 Download gff for
BO06256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23849333..23850080 | 9..757 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:15:33 Download gff for
BO06256.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19736856..19737603 | 9..757 | 99 | | Minus |
BO06256.complete Sequence
769 bp (769 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ638636
> BO06256.complete
GAAGTTATCAGTCGACATGGCTCTACGCGTCCAATTCGAGAACAACGACG
ACATCGGCGTCTTCACTAAACTAACCAACACATACTGCCTGGTGGCCATC
GGTGGATCCGAGACCTTCTACAGCGCCTTCGAGGCGGAGCTGGGCGACAC
CATCCCGGTGGTGCATGCGAATGTGGGCGGCTGCCGGATCATCGGCCGCC
TCACCGTGGGCAACCGCAACGGCCTGCTGGTGCCCAACTCCACCACCGAC
GAGGAGCTGCAACACCTGCGTAACAGCCTGCCAGACGCCGTGAAGATTTA
TCGTGTGGAGGAGCGCCTGTCCGCGCTGGGCAACGTTATCGCCTGCAATG
ATTATGTGGCCCTGGTGCACCCGGATCTGGACAAGGAGACCGAGGAGATC
ATCGCGGACGTGCTCAAAGTAGAGGTCTTCCGCCAGACCATTGCCGACAA
CTCACTGGTGGGCTCTTACGCCGTGCTGAGCAACCAGGGCGGCATGGTGC
ATCCCAAGACGAGCATTCAGGACCAGGACGAACTGTCGTCCCTGCTGCAG
GTTCCCCTCGTGGCCGGAACAGTGAACCGGGGCAGCGAAGTACTCGCCGC
CGGCATGGTCGTCAACGACTGGCTCTCCTTCGTGGGCATGAACACCACGG
CCACAGAGATCTCCGTGATCGAGAGCGTCTTCAAGCTTAACCAGGCACAG
CCCGCCACAGTGACGACCAAGCTGCGTGCGGCCCTCATCGAGGACATGTC
CGCAAGCTTTCTAGACCAT
BO06256.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:46:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF6-RA | 738 | CG17611-PA | 1..735 | 17..751 | 3675 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:46:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF6-RA | 1056 | CG17611-RA | 230..964 | 17..751 | 3675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:46:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23849338..23850072 | 751..17 | 3675 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:46:41 has no hits.
BO06256.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:25:14 Download gff for
BO06256.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-RA | 1..738 | 17..755 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:49:57 Download gff for
BO06256.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-RA | 220..967 | 9..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:24:37 Download gff for
BO06256.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-RA | 230..964 | 17..753 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:25:15 Download gff for
BO06256.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-RA | 220..967 | 9..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:55:45 Download gff for
BO06256.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF6-RA | 230..964 | 17..753 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:55:45 Download gff for
BO06256.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23849336..23850072 | 17..753 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:24:37 Download gff for
BO06256.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19736859..19737595 | 17..753 | 99 | | Minus |
BO06256.pep Sequence
Translation from 16 to 769
> BO06256.pep
MALRVQFENNDDIGVFTKLTNTYCLVAIGGSETFYSAFEAELGDTIPVVH
ANVGGCRIIGRLTVGNRNGLLVPNSTTDEELQHLRNSLPDAVKIYRVEER
LSALGNVIACNDYVALVHPDLDKETEEIIADVLKVEVFRQTIADNSLVGS
YAVLSNQGGMVHPKTSIQDQDELSSLLQVPLVAGTVNRGSEVLAAGMVVN
DWLSFVGMNTTATEISVIESVFKLNQAQPATVTTKLRAALIEDMSASFLD
H
BO06256.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:20:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF6-PA | 245 | CG17611-PA | 1..245 | 1..245 | 1228 | 100 | Plus |
