Clone Sequence Records
BO06263.3prime Sequence
578 bp (577 high quality bases) assembled on 2005-12-03
> BO06263.3prime
ATGGTCTAGAAAGCTTGCCGATACAAGACAACCGCTCTTCTCCTGGGGAT
TGCCGTTCTCGTTTTCGATGAGGATCAGTAGCTGATGGAATATATCTCCC
ACGGACTCGTTCTGTTTGGCGGACGTTTCGAGAAATGCAGCTCGCCAGGA
CTCGGCCAGCTTCTTGCCTTCCTCCGTGGAAACGGTTCGTTCCTGGTGGA
GATCGATCTTGTTGCCGACCAACACCACAGGTACATATTTCTTGCCCATT
ACGTCGAGCAGTTTTTCGTATATGATCTTCACCACCTCAAAAGACTTTTG
GCTGGTTATCGAGTACACCAGGACGTAGCCGTGGTAATCCATGCTGTACT
GCACCGGGAATATGCTGTACTCGTCCTGGCCCGCCGTGTCGATGAGCTTT
ACGATGTAGTCTTGCGACTTTACACGCTCGATCTTGGTGAAGGTGTTCTC
AATGGTGGGGTCATAGGAGTCCACGAACTGGCCCTCCACGAACTGTATGC
ATAGCGACGATTTGCCCACTGATCGGTAGCCCATCATGGCTATGTGGCGC
TCCTTGGTTGGCATGTCGACTGATAACT
BO06263.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:38:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1081-PA | 549 | Rheb-RA | 1..546 | 564..19 | 2730 | 100 | Minus |
CG1081-PB | 549 | Rheb-RB | 1..546 | 564..19 | 2730 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:09:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rheb-RB | 1059 | CG1081-RB | 137..682 | 564..19 | 2730 | 100 | Minus |
Rheb-RA | 1225 | CG1081-RA | 303..848 | 564..19 | 2730 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:09:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5569575..5569782 | 443..236 | 1040 | 100 | Minus |
3R | 32079331 | 3R | 5569842..5569971 | 235..106 | 650 | 100 | Minus |
3R | 32079331 | 3R | 5570026..5570114 | 107..19 | 445 | 100 | Minus |
3R | 32079331 | 3R | 5569399..5569471 | 516..444 | 365 | 100 | Minus |
3R | 32079331 | 3R | 5569223..5569272 | 564..515 | 250 | 100 | Minus |
Blast to na_te.dros performed 2015-02-09 19:09:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Doc | 4725 | Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). | 1977..2008 | 278..247 | 106 | 81.2 | Minus |
BO06263.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:44:34 Download gff for
BO06263.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-PA | 1..549 | 18..564 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:15:25 Download gff for
BO06263.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1081-PB | 1..549 | 18..564 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:05:09 Download gff for
BO06263.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RA | 296..848 | 19..572 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:17:36 Download gff for
BO06263.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RA | 296..848 | 19..572 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:17:36 Download gff for
BO06263.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5569216..5569271 | 516..572 | 92 | -> | Minus |
3R | 5569400..5569471 | 444..515 | 100 | -> | Minus |
3R | 5569575..5569782 | 236..443 | 100 | -> | Minus |
3R | 5569842..5569971 | 106..235 | 100 | -> | Minus |
3R | 5570028..5570114 | 19..105 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:05:09 Download gff for
BO06263.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1394938..1394993 | 516..572 | 92 | -> | Minus |
arm_3R | 1395122..1395193 | 444..515 | 100 | -> | Minus |
arm_3R | 1395297..1395504 | 236..443 | 100 | -> | Minus |
arm_3R | 1395564..1395693 | 106..235 | 100 | -> | Minus |
arm_3R | 1395750..1395836 | 19..105 | 100 | | Minus |
BO06263.5prime Sequence
578 bp (577 high quality bases) assembled on 2005-12-03
> BO06263.5prime
GAAGTTATCAGTCGACATGCCAACCAAGGAGCGCCACATAGCCATGATGG
GCTACCGATCAGTGGGCAAATCGTCGCTATGCATACAGTTCGTGGAGGGC
CAGTTCGTGGACTCCTATGACCCCACCATTGAGAACACCTTCACCAAGAT
CGAGCGTGTAAAGTCGCAAGACTACATCGTAAAGCTCATCGACACGGCGG
GCCAGGACGAGTACAGCATATTCCCGGTGCAGTACAGCATGGATTACCAC
GGCTACGTCCTGGTGTACTCGATAACCAGCCAAAAGTCTTTTGAGGTGGT
GAAGATCATATACGAAAAACTGCTCGACGTAATGGGCAAGAAATATGTAC
CTGTGGTGTTGGTCGGCAACAAGATCGATCTCCACCAGGAACGAACCGTT
TCCACGGAGGAAGGCAAGAAGCTGGCCGAGTCCTGGCGAGCTGCATTTCT
CGAAACGTCCGCCAAACAGAACGAGTCCGTGGGAGATATATTCCATCAGC
TACTGATCCTCATCGAAAACGAGAACGGCAATCCCCAGGAGAAGAGCGGT
TGTCTTGTATCGGCAAGCTTTCTAGACC
BO06263.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:38:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1081-PA | 549 | Rheb-RA | 1..546 | 17..562 | 2730 | 100 | Plus |
CG1081-PB | 549 | Rheb-RB | 1..546 | 17..562 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:09:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rheb-RB | 1059 | CG1081-RB | 137..682 | 17..562 | 2730 | 100 | Plus |
Rheb-RA | 1225 | CG1081-RA | 303..848 | 17..562 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:09:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5569575..5569782 | 138..345 | 1040 | 100 | Plus |
3R | 32079331 | 3R | 5569842..5569971 | 346..475 | 650 | 100 | Plus |
3R | 32079331 | 3R | 5570026..5570114 | 474..562 | 445 | 100 | Plus |
3R | 32079331 | 3R | 5569399..5569471 | 65..137 | 365 | 100 | Plus |
3R | 32079331 | 3R | 5569223..5569272 | 17..66 | 250 | 100 | Plus |
Blast to na_te.dros performed 2015-02-09 19:09:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Doc | 4725 | Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). | 1977..2008 | 303..334 | 106 | 81.2 | Plus |
BO06263.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:44:35 Download gff for
BO06263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-PA | 1..549 | 17..563 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:15:26 Download gff for
BO06263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1081-PB | 1..549 | 17..563 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:05:11 Download gff for
BO06263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RA | 296..848 | 9..562 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:17:38 Download gff for
BO06263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RA | 296..848 | 9..562 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:17:38 Download gff for
BO06263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5569842..5569971 | 346..475 | 100 | -> | Plus |
3R | 5570028..5570114 | 476..562 | 100 | | Plus |
3R | 5569575..5569782 | 138..345 | 100 | -> | Plus |
3R | 5569216..5569271 | 9..65 | 92 | -> | Plus |
3R | 5569400..5569471 | 66..137 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:05:11 Download gff for
BO06263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1394938..1394993 | 9..65 | 92 | -> | Plus |
arm_3R | 1395122..1395193 | 66..137 | 100 | -> | Plus |
arm_3R | 1395297..1395504 | 138..345 | 100 | -> | Plus |
arm_3R | 1395564..1395693 | 346..475 | 100 | -> | Plus |
arm_3R | 1395750..1395836 | 476..562 | 100 | | Plus |
BO06263.complete Sequence
580 bp (580 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630320
> BO06263.complete
GAAGTTATCAGTCGACATGCCAACCAAGGAGCGCCACATAGCCATGATGG
GCTACCGATCAGTGGGCAAATCGTCGCTATGCATACAGTTCGTGGAGGGC
CAGTTCGTGGACTCCTATGACCCCACCATTGAGAACACCTTCACCAAGAT
CGAGCGTGTAAAGTCGCAAGACTACATCGTAAAGCTCATCGACACGGCGG
GCCAGGACGAGTACAGCATATTCCCGGTGCAGTACAGCATGGATTACCAC
GGCTACGTCCTGGTGTACTCGATAACCAGCCAAAAGTCTTTTGAGGTGGT
GAAGATCATATACGAAAAACTGCTCGACGTAATGGGCAAGAAATATGTAC
CTGTGGTGTTGGTCGGCAACAAGATCGATCTCCACCAGGAACGAACCGTT
TCCACGGAGGAAGGCAAGAAGCTGGCCGAGTCCTGGCGAGCTGCATTTCT
CGAAACGTCCGCCAAACAGAACGAGTCCGTGGGAGATATATTCCATCAGC
TACTGATCCTCATCGAAAACGAGAACGGCAATCCCCAGGAGAAGAGCGGT
TGTCTTGTATCGGCAAGCTTTCTAGACCAT
BO06263.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:55:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rheb-RB | 549 | CG1081-PB | 1..546 | 17..562 | 2730 | 100 | Plus |
Rheb-RA | 549 | CG1081-PA | 1..546 | 17..562 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:55:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rheb-RB | 1059 | CG1081-RB | 137..682 | 17..562 | 2730 | 100 | Plus |
Rheb-RA | 1225 | CG1081-RA | 303..848 | 17..562 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:55:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5569575..5569782 | 138..345 | 1040 | 100 | Plus |
3R | 32079331 | 3R | 5569842..5569971 | 346..475 | 650 | 100 | Plus |
3R | 32079331 | 3R | 5570026..5570114 | 474..562 | 445 | 100 | Plus |
3R | 32079331 | 3R | 5569399..5569471 | 65..137 | 365 | 100 | Plus |
3R | 32079331 | 3R | 5569223..5569272 | 17..66 | 250 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 14:55:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Doc | 4725 | Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). | 1977..2008 | 303..334 | 106 | 81.2 | Plus |
BO06263.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:55:29 Download gff for
BO06263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RB | 1..549 | 17..563 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:27:55 Download gff for
BO06263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RA | 321..873 | 9..562 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:04 Download gff for
BO06263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RA | 303..848 | 17..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:55:29 Download gff for
BO06263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RB | 92..644 | 9..562 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:55:52 Download gff for
BO06263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rheb-RA | 303..848 | 17..564 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:55:52 Download gff for
BO06263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5569223..5569271 | 17..65 | 100 | -> | Plus |
3R | 5569400..5569471 | 66..137 | 100 | -> | Plus |
3R | 5569575..5569782 | 138..345 | 100 | -> | Plus |
3R | 5569842..5569971 | 346..475 | 100 | -> | Plus |
3R | 5570028..5570114 | 476..564 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:04 Download gff for
BO06263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1395750..1395836 | 476..564 | 97 | | Plus |
arm_3R | 1394945..1394993 | 17..65 | 100 | -> | Plus |
arm_3R | 1395122..1395193 | 66..137 | 100 | -> | Plus |
arm_3R | 1395297..1395504 | 138..345 | 100 | -> | Plus |
arm_3R | 1395564..1395693 | 346..475 | 100 | -> | Plus |
BO06263.pep Sequence
Translation from 16 to 580
> BO06263.pep
MPTKERHIAMMGYRSVGKSSLCIQFVEGQFVDSYDPTIENTFTKIERVKS
QDYIVKLIDTAGQDEYSIFPVQYSMDYHGYVLVYSITSQKSFEVVKIIYE
KLLDVMGKKYVPVVLVGNKIDLHQERTVSTEEGKKLAESWRAAFLETSAK
QNESVGDIFHQLLILIENENGNPQEKSGCLVSASFLDH
BO06263.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:18:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rheb-PB | 182 | CG1081-PB | 1..182 | 1..182 | 932 | 100 | Plus |
Rheb-PA | 182 | CG1081-PA | 1..182 | 1..182 | 932 | 100 | Plus |
R-PC | 184 | CG1956-PC | 2..174 | 4..176 | 345 | 41.6 | Plus |
R-PB | 184 | CG1956-PB | 2..174 | 4..176 | 345 | 41.6 | Plus |
R-PA | 184 | CG1956-PA | 2..174 | 4..176 | 345 | 41.6 | Plus |