Clone BO06263 Report

Search the DGRC for BO06263

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:62
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptRheb-RA
Protein status:BO06263.pep: validated full length
Sequenced Size:580

Clone Sequence Records

BO06263.3prime Sequence

578 bp (577 high quality bases) assembled on 2005-12-03

> BO06263.3prime
ATGGTCTAGAAAGCTTGCCGATACAAGACAACCGCTCTTCTCCTGGGGAT
TGCCGTTCTCGTTTTCGATGAGGATCAGTAGCTGATGGAATATATCTCCC
ACGGACTCGTTCTGTTTGGCGGACGTTTCGAGAAATGCAGCTCGCCAGGA
CTCGGCCAGCTTCTTGCCTTCCTCCGTGGAAACGGTTCGTTCCTGGTGGA
GATCGATCTTGTTGCCGACCAACACCACAGGTACATATTTCTTGCCCATT
ACGTCGAGCAGTTTTTCGTATATGATCTTCACCACCTCAAAAGACTTTTG
GCTGGTTATCGAGTACACCAGGACGTAGCCGTGGTAATCCATGCTGTACT
GCACCGGGAATATGCTGTACTCGTCCTGGCCCGCCGTGTCGATGAGCTTT
ACGATGTAGTCTTGCGACTTTACACGCTCGATCTTGGTGAAGGTGTTCTC
AATGGTGGGGTCATAGGAGTCCACGAACTGGCCCTCCACGAACTGTATGC
ATAGCGACGATTTGCCCACTGATCGGTAGCCCATCATGGCTATGTGGCGC
TCCTTGGTTGGCATGTCGACTGATAACT

BO06263.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:38:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG1081-PA 549 Rheb-RA 1..546 564..19 2730 100 Minus
CG1081-PB 549 Rheb-RB 1..546 564..19 2730 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:09:30
Subject Length Description Subject Range Query Range Score Percent Strand
Rheb-RB 1059 CG1081-RB 137..682 564..19 2730 100 Minus
Rheb-RA 1225 CG1081-RA 303..848 564..19 2730 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:09:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5569575..5569782 443..236 1040 100 Minus
3R 32079331 3R 5569842..5569971 235..106 650 100 Minus
3R 32079331 3R 5570026..5570114 107..19 445 100 Minus
3R 32079331 3R 5569399..5569471 516..444 365 100 Minus
3R 32079331 3R 5569223..5569272 564..515 250 100 Minus
Blast to na_te.dros performed 2015-02-09 19:09:26
Subject Length Description Subject Range Query Range Score Percent Strand
Doc 4725 Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). 1977..2008 278..247 106 81.2 Minus

BO06263.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:44:34 Download gff for BO06263.3prime
Subject Subject Range Query Range Percent Splice Strand
Rheb-PA 1..549 18..564 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:15:25 Download gff for BO06263.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1081-PB 1..549 18..564 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:05:09 Download gff for BO06263.3prime
Subject Subject Range Query Range Percent Splice Strand
Rheb-RA 296..848 19..572 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:17:36 Download gff for BO06263.3prime
Subject Subject Range Query Range Percent Splice Strand
Rheb-RA 296..848 19..572 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:17:36 Download gff for BO06263.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 5569216..5569271 516..572 92 -> Minus
3R 5569400..5569471 444..515 100 -> Minus
3R 5569575..5569782 236..443 100 -> Minus
3R 5569842..5569971 106..235 100 -> Minus
3R 5570028..5570114 19..105 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:05:09 Download gff for BO06263.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1394938..1394993 516..572 92 -> Minus
arm_3R 1395122..1395193 444..515 100 -> Minus
arm_3R 1395297..1395504 236..443 100 -> Minus
arm_3R 1395564..1395693 106..235 100 -> Minus
arm_3R 1395750..1395836 19..105 100   Minus

BO06263.5prime Sequence

578 bp (577 high quality bases) assembled on 2005-12-03

> BO06263.5prime
GAAGTTATCAGTCGACATGCCAACCAAGGAGCGCCACATAGCCATGATGG
GCTACCGATCAGTGGGCAAATCGTCGCTATGCATACAGTTCGTGGAGGGC
CAGTTCGTGGACTCCTATGACCCCACCATTGAGAACACCTTCACCAAGAT
CGAGCGTGTAAAGTCGCAAGACTACATCGTAAAGCTCATCGACACGGCGG
GCCAGGACGAGTACAGCATATTCCCGGTGCAGTACAGCATGGATTACCAC
GGCTACGTCCTGGTGTACTCGATAACCAGCCAAAAGTCTTTTGAGGTGGT
GAAGATCATATACGAAAAACTGCTCGACGTAATGGGCAAGAAATATGTAC
CTGTGGTGTTGGTCGGCAACAAGATCGATCTCCACCAGGAACGAACCGTT
TCCACGGAGGAAGGCAAGAAGCTGGCCGAGTCCTGGCGAGCTGCATTTCT
CGAAACGTCCGCCAAACAGAACGAGTCCGTGGGAGATATATTCCATCAGC
TACTGATCCTCATCGAAAACGAGAACGGCAATCCCCAGGAGAAGAGCGGT
TGTCTTGTATCGGCAAGCTTTCTAGACC

BO06263.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:38:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG1081-PA 549 Rheb-RA 1..546 17..562 2730 100 Plus
CG1081-PB 549 Rheb-RB 1..546 17..562 2730 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:09:44
Subject Length Description Subject Range Query Range Score Percent Strand
Rheb-RB 1059 CG1081-RB 137..682 17..562 2730 100 Plus
Rheb-RA 1225 CG1081-RA 303..848 17..562 2730 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:09:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5569575..5569782 138..345 1040 100 Plus
3R 32079331 3R 5569842..5569971 346..475 650 100 Plus
3R 32079331 3R 5570026..5570114 474..562 445 100 Plus
3R 32079331 3R 5569399..5569471 65..137 365 100 Plus
3R 32079331 3R 5569223..5569272 17..66 250 100 Plus
Blast to na_te.dros performed 2015-02-09 19:09:40
Subject Length Description Subject Range Query Range Score Percent Strand
Doc 4725 Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). 1977..2008 303..334 106 81.2 Plus

BO06263.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:44:35 Download gff for BO06263.5prime
Subject Subject Range Query Range Percent Splice Strand
Rheb-PA 1..549 17..563 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:15:26 Download gff for BO06263.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1081-PB 1..549 17..563 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:05:11 Download gff for BO06263.5prime
Subject Subject Range Query Range Percent Splice Strand
Rheb-RA 296..848 9..562 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:17:38 Download gff for BO06263.5prime
Subject Subject Range Query Range Percent Splice Strand
Rheb-RA 296..848 9..562 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:17:38 Download gff for BO06263.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 5569842..5569971 346..475 100 -> Plus
3R 5570028..5570114 476..562 100   Plus
3R 5569575..5569782 138..345 100 -> Plus
3R 5569216..5569271 9..65 92 -> Plus
3R 5569400..5569471 66..137 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:05:11 Download gff for BO06263.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1394938..1394993 9..65 92 -> Plus
arm_3R 1395122..1395193 66..137 100 -> Plus
arm_3R 1395297..1395504 138..345 100 -> Plus
arm_3R 1395564..1395693 346..475 100 -> Plus
arm_3R 1395750..1395836 476..562 100   Plus

BO06263.complete Sequence

580 bp (580 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ630320

> BO06263.complete
GAAGTTATCAGTCGACATGCCAACCAAGGAGCGCCACATAGCCATGATGG
GCTACCGATCAGTGGGCAAATCGTCGCTATGCATACAGTTCGTGGAGGGC
CAGTTCGTGGACTCCTATGACCCCACCATTGAGAACACCTTCACCAAGAT
CGAGCGTGTAAAGTCGCAAGACTACATCGTAAAGCTCATCGACACGGCGG
GCCAGGACGAGTACAGCATATTCCCGGTGCAGTACAGCATGGATTACCAC
GGCTACGTCCTGGTGTACTCGATAACCAGCCAAAAGTCTTTTGAGGTGGT
GAAGATCATATACGAAAAACTGCTCGACGTAATGGGCAAGAAATATGTAC
CTGTGGTGTTGGTCGGCAACAAGATCGATCTCCACCAGGAACGAACCGTT
TCCACGGAGGAAGGCAAGAAGCTGGCCGAGTCCTGGCGAGCTGCATTTCT
CGAAACGTCCGCCAAACAGAACGAGTCCGTGGGAGATATATTCCATCAGC
TACTGATCCTCATCGAAAACGAGAACGGCAATCCCCAGGAGAAGAGCGGT
TGTCTTGTATCGGCAAGCTTTCTAGACCAT

BO06263.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:55:20
Subject Length Description Subject Range Query Range Score Percent Strand
Rheb-RB 549 CG1081-PB 1..546 17..562 2730 100 Plus
Rheb-RA 549 CG1081-PA 1..546 17..562 2730 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:55:21
Subject Length Description Subject Range Query Range Score Percent Strand
Rheb-RB 1059 CG1081-RB 137..682 17..562 2730 100 Plus
Rheb-RA 1225 CG1081-RA 303..848 17..562 2730 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:55:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5569575..5569782 138..345 1040 100 Plus
3R 32079331 3R 5569842..5569971 346..475 650 100 Plus
3R 32079331 3R 5570026..5570114 474..562 445 100 Plus
3R 32079331 3R 5569399..5569471 65..137 365 100 Plus
3R 32079331 3R 5569223..5569272 17..66 250 100 Plus
Blast to na_te.dros performed 2014-11-27 14:55:20
Subject Length Description Subject Range Query Range Score Percent Strand
Doc 4725 Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). 1977..2008 303..334 106 81.2 Plus

BO06263.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:55:29 Download gff for BO06263.complete
Subject Subject Range Query Range Percent Splice Strand
Rheb-RB 1..549 17..563 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:27:55 Download gff for BO06263.complete
Subject Subject Range Query Range Percent Splice Strand
Rheb-RA 321..873 9..562 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:04 Download gff for BO06263.complete
Subject Subject Range Query Range Percent Splice Strand
Rheb-RA 303..848 17..564 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:55:29 Download gff for BO06263.complete
Subject Subject Range Query Range Percent Splice Strand
Rheb-RB 92..644 9..562 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:55:52 Download gff for BO06263.complete
Subject Subject Range Query Range Percent Splice Strand
Rheb-RA 303..848 17..564 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:55:52 Download gff for BO06263.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5569223..5569271 17..65 100 -> Plus
3R 5569400..5569471 66..137 100 -> Plus
3R 5569575..5569782 138..345 100 -> Plus
3R 5569842..5569971 346..475 100 -> Plus
3R 5570028..5570114 476..564 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:04 Download gff for BO06263.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1395750..1395836 476..564 97   Plus
arm_3R 1394945..1394993 17..65 100 -> Plus
arm_3R 1395122..1395193 66..137 100 -> Plus
arm_3R 1395297..1395504 138..345 100 -> Plus
arm_3R 1395564..1395693 346..475 100 -> Plus

BO06263.pep Sequence

Translation from 16 to 580

> BO06263.pep
MPTKERHIAMMGYRSVGKSSLCIQFVEGQFVDSYDPTIENTFTKIERVKS
QDYIVKLIDTAGQDEYSIFPVQYSMDYHGYVLVYSITSQKSFEVVKIIYE
KLLDVMGKKYVPVVLVGNKIDLHQERTVSTEEGKKLAESWRAAFLETSAK
QNESVGDIFHQLLILIENENGNPQEKSGCLVSASFLDH

BO06263.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:18:10
Subject Length Description Subject Range Query Range Score Percent Strand
Rheb-PB 182 CG1081-PB 1..182 1..182 932 100 Plus
Rheb-PA 182 CG1081-PA 1..182 1..182 932 100 Plus
R-PC 184 CG1956-PC 2..174 4..176 345 41.6 Plus
R-PB 184 CG1956-PB 2..174 4..176 345 41.6 Plus
R-PA 184 CG1956-PA 2..174 4..176 345 41.6 Plus