Clone BO06266 Report

Search the DGRC for BO06266

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:62
Well:66
Vector:pDNR-Dual
Associated Gene/TranscriptCG11191-RA
Protein status:BO06266.pep: validated full length
Sequenced Size:943

Clone Sequence Records

BO06266.3prime Sequence

849 bp (847 high quality bases) assembled on 2005-12-03

> BO06266.3prime
ATGGTCTAGAAAGCTTGCGAAGCTCCTAAGGCAAAGATTGCAGTTGTTTC
CGCCTACTGCATTGTCGTGTCGGTGCAGCTCCAGGCTGAGGGGCTCCGTG
TCGTCCACCCAGGTCTCCAGGGTGCAGGAGCTGGACTGGTGGCTGGACTT
TTGCGACTGGGAGAGGGATCTGGTGGCCGCCGCCGCCTGCCGCCACCTGG
CTTCGAAGTCATCCCAGCGATCGCAGGCGTCGTCGTCCAGGGAGTTCCCG
TTGATGTCCCACTTAACAATGGGGAAGTCGTCGTGCGGTGGCTCCATGAT
CACCACGCTGTGGTAGTTGCCCTCCAGCTTGGAGCCCAGGCTGATACTGC
AGGGATGGTAGCGGCTGGGCGTGGGAATCCTTTGCTGCACTTGTTGTTTC
CTAGGAGTTGCCTGCTGCAGCACTTGCTGTTTCCGCGGAGTAGCCTGCTG
CTGCTGCTGCTGCTCTGGCTGCTCCTCCTTCTGTTCCTCCAGCTGCAGAT
CCAGACTGGAATTGGAGGGCGTGTGCCGCAGGTAGCGTACATTCGCCTTG
TATTTCACCCGCTCGAACTCGATGGTCGTTAGTGGTGTGTCCAACACCTC
GTAGTTGCCGCAGCTCATCATGTATTTGGTGCGCAGGTCATGCTTGGCCG
CTGGCTGCAGTTCCTCCACCTCCACCTCCTTGGAGGTGGCCAAGTCCAAG
GCCTGGTTGCACTCGCTCAGCTGCAGCTCTTCGTAGATGGCCTCCGTCAC
CGGACAGTTGCTGTTCACATCCAGCTCCAGATCTCGCTGCAGGTTGAGCT
CCTCCTCCACCTCCTCGTCGTCCCCGTCCTCCTCGTCCAGCCGCTGGAC

BO06266.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:38:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG11191-PA 912 CG11191-RA 79..909 849..19 4155 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:21:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG11191-RB 1459 CG11191-RB 235..1065 849..19 4155 100 Minus
CG11191-RA 1300 CG11191-RA 235..1065 849..19 4155 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:21:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8000884..8001714 19..849 4155 100 Plus
Blast to na_te.dros performed on 2015-02-11 16:21:05 has no hits.

BO06266.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:44:40 Download gff for BO06266.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-PA 79..912 16..849 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:15:34 Download gff for BO06266.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-PA 79..912 16..849 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:39:03 Download gff for BO06266.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 235..1065 19..849 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:39:58 Download gff for BO06266.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 235..1065 19..849 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:39:58 Download gff for BO06266.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 8000884..8001714 19..849 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:39:03 Download gff for BO06266.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3888389..3889219 19..849 100   Plus

BO06266.5prime Sequence

924 bp (830 high quality bases) assembled on 2005-12-03

> BO06266.5prime
GAAGTTATCAGTCGACATGTCGCACTTGCTGAGGCGCACCAAGAAGTCCT
GTCTGAAGTTCCTGCGCAAGATATCGACTTCAAAGCAGCTCTTTGTCCAG
CGGCTGGACGAGGAGGACGGGGACGACGAGGAGGTGGAGGAGGAGCTCAA
CCTGCAGCGAGATCTGGAGCTGGATGTGAACAGCAACTGTCCGGTGACGG
AGGCCATCTACGAAGAGCTGCAGCTGAGCGAGTGCAACCAGGCCTTGGAC
TTGGCCACCTCCAAGGAGGTGGAGGTGGAGGAACTGCAGCCAGCGGCCAA
GCATGACCTGCGCACCAAATACATGATGAGCTGCGGCAACTACGAGGTGT
TGGACACACCACTAACGACCATCGAGTTCGAGCGGGTGAAATACAAGGCG
AATGTACGCTACCTGCGGCACACGCCCTCCAATTCCAGTCTGGATCTGCA
GCTGGAGGAACAGAAGGAGGAGCAGCCAGAGCAGCAGCAGCAGCAGCAGG
CTACTCCGCGGAAACAGCAAGTGCTGCAGCAGGCAACTCCTAGGAAACAA
CAAGTGCAGCAAAGGATTCCCACGCCCAGCCGCTACCATCCCTGCAGTAT
CAGCCTGGGCTCCAAGCTGGAGGGCAACTACCACAGCGTGGTGATCATGG
AGCCACCGCACGACGACTTCCCCATTGTTAAGTGGGACATCAACGGGAAC
TCCCTGGACGACGACGCCTGCGATCGCTGGGATGACTTCGAAGCCAGGTG
GCGGCAGGCGGCGGCGGCCACCAGATCCCTCTCCCAGTCGCAAAAGTCCA
GCCACCAGTCCAGCTCCTGCACCCTGGAGACCTGGGTGGACGACNACGAG
CCCCTCAGCCTGGAGCTGCACCGACACGACNATGCAGTAGGCGGAAACAA
CTGCAATCTTTGCCTTANGAGCTT

BO06266.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:38:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG11191-PA 912 CG11191-RA 1..828 17..844 4140 100 Plus
CG11191-PA 912 CG11191-RA 832..908 848..924 347 97.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:02:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG11191-RB 1459 CG11191-RB 156..1064 16..924 4478 99.6 Plus
CG11191-RA 1300 CG11191-RA 156..1064 16..924 4478 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:02:48
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8000885..8001752 924..57 4277 99.4 Minus
2R 25286936 2R 8001923..8001965 58..16 215 100 Minus
Blast to na_te.dros performed on 2015-02-11 05:02:49 has no hits.

BO06266.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:44:41 Download gff for BO06266.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-PA 1..908 17..924 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:15:35 Download gff for BO06266.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-PA 1..908 17..924 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:18:13 Download gff for BO06266.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 143..1064 2..924 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:41:05 Download gff for BO06266.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 143..1064 2..924 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:41:05 Download gff for BO06266.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8000885..8001750 59..924 99 <- Minus
2R 8001923..8001978 2..58 91   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:18:13 Download gff for BO06266.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3888390..3889255 59..924 99 <- Minus
arm_2R 3889428..3889483 2..58 91   Minus

BO06266.complete Sequence

943 bp (943 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ630322

> BO06266.complete
GAAGTTATCAGTCGACATGTCGCACTTGCTGAGGCGCACCAAGAAGTCCT
GTCTGAAGTTCCTGCGCAAGATATCGACTTCAAAGCAGCTCTTTGTCCAG
CGGCTGGACGAGGAGGACGGGGACGACGAGGAGGTGGAGGAGGAGCTCAA
CCTGCAGCGAGATCTGGAGCTGGATGTGAACAGCAACTGTCCGGTGACGG
AGGCCATCTACGAAGAGCTGCAGCTGAGCGAGTGCAACCAGGCCTTGGAC
TTGGCCACCTCCAAGGAGGTGGAGGTGGAGGAACTGCAGCCAGCGGCCAA
GCATGACCTGCGCACCAAATACATGATGAGCTGCGGCAACTACGAGGTGT
TGGACACACCACTAACGACCATCGAGTTCGAGCGGGTGAAATACAAGGCG
AATGTACGCTACCTGCGGCACACGCCCTCCAATTCCAGTCTGGATCTGCA
GCTGGAGGAACAGAAGGAGGAGCAGCCAGAGCAGCAGCAGCAGCAGCAGG
CTACTCCGCGGAAACAGCAAGTGCTGCAGCAGGCAACTCCTAGGAAACAA
CAAGTGCAGCAAAGGATTCCCACGCCCAGCCGCTACCATCCCTGCAGTAT
CAGCCTGGGCTCCAAGCTGGAGGGCAACTACCACAGCGTGGTGATCATGG
AGCCACCGCACGACGACTTCCCCATTGTTAAGTGGGACATCAACGGGAAC
TCCCTGGACGACGACGCCTGCGATCGCTGGGATGACTTCGAAGCCAGGTG
GCGGCAGGCGGCGGCGGCCACCAGATCCCTCTCCCAGTCGCAAAAGTCCA
GCCACCAGTCCAGCTCCTGCACCCTGGAGACCTGGGTGGACGACACGGAG
CCCCTCAGCCTGGAGCTGCACCGACACGACAATGCAGTAGGCGGAAACAA
CTGCAATCTTTGCCTTAGGAGCTTCGCAAGCTTTCTAGACCAT

BO06266.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:40:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG11191-RB 912 CG11191-PB 1..909 17..925 4545 100 Plus
CG11191-RA 912 CG11191-PA 1..909 17..925 4545 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:40:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG11191-RB 1459 CG11191-RB 156..1065 16..925 4550 100 Plus
CG11191-RA 1300 CG11191-RA 156..1065 16..925 4550 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:40:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8000884..8001752 925..57 4345 100 Minus
2R 25286936 2R 8001923..8001965 58..16 215 100 Minus
Blast to na_te.dros performed on 2014-11-27 06:40:27 has no hits.

BO06266.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:25:00 Download gff for BO06266.complete
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 1..912 17..928 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:49:27 Download gff for BO06266.complete
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 143..1065 2..925 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:50:23 Download gff for BO06266.complete
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 157..1065 17..927 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:25:00 Download gff for BO06266.complete
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 143..1065 2..925 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:25 Download gff for BO06266.complete
Subject Subject Range Query Range Percent Splice Strand
CG11191-RA 157..1065 17..927 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:25 Download gff for BO06266.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8000881..8001750 59..927 99 <- Minus
2R 8001923..8001964 17..58 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:50:23 Download gff for BO06266.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3888386..3889255 59..927 99 <- Minus
arm_2R 3889428..3889469 17..58 100   Minus

BO06266.pep Sequence

Translation from 16 to 943

> BO06266.pep
MSHLLRRTKKSCLKFLRKISTSKQLFVQRLDEEDGDDEEVEEELNLQRDL
ELDVNSNCPVTEAIYEELQLSECNQALDLATSKEVEVEELQPAAKHDLRT
KYMMSCGNYEVLDTPLTTIEFERVKYKANVRYLRHTPSNSSLDLQLEEQK
EEQPEQQQQQQATPRKQQVLQQATPRKQQVQQRIPTPSRYHPCSISLGSK
LEGNYHSVVIMEPPHDDFPIVKWDINGNSLDDDACDRWDDFEARWRQAAA
ATRSLSQSQKSSHQSSSCTLETWVDDTEPLSLELHRHDNAVGGNNCNLCL
RSFASFLDH

BO06266.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:21:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG11191-PB 303 CG11191-PB 1..303 1..303 1594 100 Plus
CG11191-PA 303 CG11191-PA 1..303 1..303 1594 100 Plus