Clone Sequence Records
BO06283.3prime Sequence
847 bp (810 high quality bases) assembled on 2005-12-03
> BO06283.3prime
ATGGTCTAGAAAGCTTGCGTTTTTAGTAGAATCCGTTTCGACTTCATCAT
TTCTTGCAGCTACAAAGTTGGCCACATCCACGGGAGTACCTGCATGGCTG
ACCTCATCACCACCACCAACTTCTGTACCATCATCTGCACGACCAACAAT
ATCGCCGGCAACGATGGGTGGCTCAGTGGTTATGGTGGGTTGGAAATTGC
CCGGATTGTGGGGTGGAGCTGGAAAGCAAACGACCCGTTCCACTTCTCGC
ATCACCTCCGAGTTTTCGGGATCTGTTTCGTTTAGCATGATGGGAAAGCA
AATGATGCCACCATCTGGATAGGGCTGAGGAGTTGCCTCCGATTCCGTGG
ATTCCTCACTGGAAACAGCTTCACTTCCTCCGTCACCTTCGCCCTGCCCC
TCTACGTCATCCTCCTCCGTTAGGGGATTTTCCGGGGGGACCACTGCGGA
GGATTCTCCTGAAATAGTGGTCTCATTGTGCAAAACTCCCTCCTGCTGAC
CATTGTTGACGATGATGATCTGTCGACCATTTCCCTGGGGCGACGACTGG
CCCTCCTCCGGATTTCTATGGTACGTATGGTGTCGGTGGCCAAACAGAAC
GTTGTTCATCATGTGACCCGCCAGCATTCCGGTGAGGAAATCTCCTGTAC
CGATTCCTCGATTCATTCCGACGGGTGGTTGGGCATAGTAAACCGCTCCC
GCTGGCAGGGCCTGGGCATTGGCGTAGTACGTTCCACTGCCTTGGCCCGG
ATACGATCCAAAGCCATAGCCAGGTGGCATCTGCTGGCGAGGATAGCTGG
GGATTTGCTGCTTGGGCGGCATCATGGGCATCTTTGGTGGTGCCGGC
BO06283.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:38:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31706-PA | 1056 | CG31706-RA | 225..1053 | 847..19 | 4145 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:10:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31706-RB | 1625 | CG31706-RB | 283..1111 | 847..19 | 4145 | 100 | Minus |
| CG31706-RA | 1139 | CG31706-RA | 283..1111 | 847..19 | 4145 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:10:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11529552..11530184 | 19..651 | 3165 | 100 | Plus |
| 2L | 23513712 | 2L | 11530572..11530770 | 649..847 | 995 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 19:10:30 has no hits.
BO06283.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:45:12 Download gff for
BO06283.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-PA | 225..1056 | 15..847 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:16:18 Download gff for
BO06283.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-PA | 225..1056 | 15..847 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:05:19 Download gff for
BO06283.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-RA | 283..1117 | 11..847 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:17:43 Download gff for
BO06283.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-RA | 283..1117 | 11..847 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:17:43 Download gff for
BO06283.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11529546..11530183 | 11..650 | 99 | <- | Plus |
| 2L | 11530574..11530770 | 651..847 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:05:19 Download gff for
BO06283.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11529546..11530183 | 11..650 | 99 | <- | Plus |
| arm_2L | 11530574..11530770 | 651..847 | 100 | | Plus |
BO06283.5prime Sequence
895 bp (775 high quality bases) assembled on 2005-12-03
> BO06283.5prime
GAAGTTATCAGTCGACATGAAATCCTGGTACCTAGCACTCAGCCTGCTGC
TCCTCGCCGCATCCACAATTCAGCCCACTGACGCTCGTGGCGGAAGGGGG
CGTGGCGGCGGCTCATTTGGCGGACTCTTTGGCGGTTGGCGCAAGTACAA
GAAGCCCTCGTCGTCGGGCGGTGGTCGGCGGGTGGTGAGCGGTTCGCCAG
TTCACACGGCCATGACGGTGCCGAAACCACCACCGCCTCCGCCGGCACCA
CCAAAGATGCCCATGATGCCGCCCAAGCAGCAAATCCCCAGCTATCCTCG
CCAGCAGATGCCACCTGGCTATGGCTTTGGATCGTATCCGGGCCAAGGCA
GTGGAACGTACTACGCCAATGCCCAGGCCCTGCCAGCGGGAGCGGTTTAC
TATGCCCAACCACCCGTCGGAATGAATCGAGGAATCGGTACAGGAGATTT
CCTCACCGGAATGCTGGCGGGTCACATGATGAACAACGTTCTGTTTGGCC
ACCGACACCATACGTACCATAGAAATCCGGAGGAGGGCCAGTCGTCGCCC
CAGGGAAATGGTCGACAGATCATCATCGTCAACAATGGTCAGCAGGAGGG
AGTTTTGCACAATGAGACCACTATTTCAGGAGAATCCTCCGCAGTGGTCC
CCCCGGAAAATCCCCTAACGGAGGAGGATGACGTAGAGGGGCAGGGCGAA
GGTGACGGAGGAAGTGAAGCTGTTTCCAGTGAGGAATCCACGGAATCGGA
GGCAACTCCTCAGCCCTATCCAGATGGTGGCATCATTTGCTTTCCCATCA
TGCTAAACGAAACAGATCCCGAAAACTCGGAGGTGATGCGAGAAGTGGAA
CGGGTCGTTTGCTTTCCAGCTCCACCCCACAATCCCGGGCAATTC
BO06283.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:38:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31706-PA | 1056 | CG31706-RA | 1..869 | 17..885 | 4345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:54:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31706-RB | 1625 | CG31706-RB | 59..935 | 17..894 | 4365 | 99.9 | Plus |
| CG31706-RA | 1139 | CG31706-RA | 59..935 | 17..894 | 4365 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:54:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11529736..11530184 | 885..437 | 2245 | 100 | Minus |
| 2L | 23513712 | 2L | 11530572..11530994 | 439..17 | 2115 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 19:54:20 has no hits.
BO06283.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:45:13 Download gff for
BO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-PA | 1..877 | 17..895 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:16:20 Download gff for
BO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-PA | 1..877 | 17..895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:21:27 Download gff for
BO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-RA | 51..935 | 9..895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:44:51 Download gff for
BO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-RA | 51..935 | 9..895 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:44:51 Download gff for
BO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11529726..11530183 | 438..895 | 99 | <- | Minus |
| 2L | 11530574..11531002 | 9..437 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:21:27 Download gff for
BO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11530574..11531002 | 9..437 | 99 | | Minus |
| arm_2L | 11529726..11530183 | 438..895 | 99 | <- | Minus |
BO06283.complete Sequence
1087 bp (1087 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630330
> BO06283.complete
GAAGTTATCAGTCGACATGAAATCCTGGTACCTAGCACTCAGCCTGCTGC
TCCTCGCCGCATCCACAATTCAGCCCACTGACGCTCGTGGCGGAAGGGGG
CGTGGCGGCGGCTCATTTGGCGGACTCTTTGGCGGTTGGCGCAAGTACAA
GAAGCCCTCGTCGTCGGGCGGTGGTCGGCGGGTGGTGAGCGGTTCGCCAG
TTCACACGGCCATGACGGTGCCGAAACCACCACCGCCTCCGCCGGCACCA
CCAAAGATGCCCATGATGCCGCCCAAGCAGCAAATCCCCAGCTATCCTCG
CCAGCAGATGCCACCTGGCTATGGCTTTGGATCGTATCCGGGCCAAGGCA
GTGGAACGTACTACGCCAATGCCCAGGCCCTGCCAGCGGGAGCGGTTTAC
TATGCCCAACCACCCGTCGGAATGAATCGAGGAATCGGTACAGGAGATTT
CCTCACCGGAATGCTGGCGGGTCACATGATGAACAACGTTCTGTTTGGCC
ACCGACACCATACGTACCATAGAAATCCGGAGGAGGGCCAGTCGTCGCCC
CAGGGAAATGGTCGACAGATCATCATCGTCAACAATGGTCAGCAGGAGGG
AGTTTTGCACAATGAGACCACTATTTCAGGAGAATCCTCCGCAGTGGTCC
CCCCGGAAAATCCCCTAACGGAGGAGGATGACGTAGAGGGGCAGGGCGAA
GGTGACGGAGGAAGTGAAGCTGTTTCCAGTGAGGAATCCACGGAATCGGA
GGCAACTCCTCAGCCCTATCCAGATGGTGGCATCATTTGCTTTCCCATCA
TGCTAAACGAAACAGATCCCGAAAACTCGGAGGTGATGCGAGAAGTGGAA
CGGGTCGTTTGCTTTCCAGCTCCACCCCACAATCCGGGCAATTTCCAACC
CACCATAACCACTGAGCCACCCATCGTTGCCGGCGATATTGTTGGTCGTG
CAGATGATGGTACAGAAGTTGGTGGTGGTGATGAGGTCAGCCATGCAGGT
ACTCCCGTGGATGTGGCCAACTTTGTAGCTGCAAGAAATGATGAAGTCGA
AACGGATTCTACTAAAAACGCAAGCTTTCTAGACCAT
BO06283.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:14:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31706-RB | 1056 | CG31706-PB | 1..1053 | 17..1069 | 5265 | 100 | Plus |
| CG31706-RA | 1056 | CG31706-PA | 1..1053 | 17..1069 | 5265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31706-RB | 1625 | CG31706-RB | 59..1111 | 17..1069 | 5265 | 100 | Plus |
| CG31706-RA | 1139 | CG31706-RA | 59..1111 | 17..1069 | 5265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11529552..11530184 | 1069..437 | 3165 | 100 | Minus |
| 2L | 23513712 | 2L | 11530572..11530994 | 439..17 | 2115 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:14:49 has no hits.
BO06283.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:24:54 Download gff for
BO06283.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-RA | 1..1056 | 17..1073 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:49:19 Download gff for
BO06283.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-RA | 48..1114 | 9..1077 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:55:55 Download gff for
BO06283.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-RA | 59..1111 | 17..1071 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:24:54 Download gff for
BO06283.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-RA | 48..1114 | 9..1077 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:14:31 Download gff for
BO06283.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31706-RA | 59..1111 | 17..1071 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:14:31 Download gff for
BO06283.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11529550..11530183 | 438..1071 | 99 | <- | Minus |
| 2L | 11530574..11530994 | 17..437 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:55:55 Download gff for
BO06283.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11529550..11530183 | 438..1071 | 99 | <- | Minus |
| arm_2L | 11530574..11530994 | 17..437 | 100 | | Minus |
BO06283.pep Sequence
Translation from 16 to 1087
> BO06283.pep
MKSWYLALSLLLLAASTIQPTDARGGRGRGGGSFGGLFGGWRKYKKPSSS
GGGRRVVSGSPVHTAMTVPKPPPPPPAPPKMPMMPPKQQIPSYPRQQMPP
GYGFGSYPGQGSGTYYANAQALPAGAVYYAQPPVGMNRGIGTGDFLTGML
AGHMMNNVLFGHRHHTYHRNPEEGQSSPQGNGRQIIIVNNGQQEGVLHNE
TTISGESSAVVPPENPLTEEDDVEGQGEGDGGSEAVSSEESTESEATPQP
YPDGGIICFPIMLNETDPENSEVMREVERVVCFPAPPHNPGNFQPTITTE
PPIVAGDIVGRADDGTEVGGGDEVSHAGTPVDVANFVAARNDEVETDSTK
NASFLDH
BO06283.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:23:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31706-PB | 351 | CG31706-PB | 1..351 | 1..351 | 1895 | 100 | Plus |
| CG31706-PA | 351 | CG31706-PA | 1..351 | 1..351 | 1895 | 100 | Plus |
| CG5273-PB | 469 | CG5273-PB | 153..392 | 58..287 | 250 | 32.4 | Plus |
| CG5273-PC | 469 | CG5273-PC | 153..392 | 58..287 | 250 | 32.4 | Plus |
| CG5273-PA | 469 | CG5273-PA | 153..392 | 58..287 | 250 | 32.4 | Plus |
