Clone BO06292 Report

Search the DGRC for BO06292

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:62
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptCG10307-RA
Protein status:BO06292.pep: validated full length
Sequenced Size:1057

Clone Sequence Records

BO06292.3prime Sequence

884 bp (848 high quality bases) assembled on 2005-12-03

> BO06292.3prime
ATGGTCTAGAAAGCTTGCAAAGGTGGTGACAAAGCGCGACATTTCCGGCA
GCATGACACTCAGATCCTCGATGTTGTTCTCCAGCGCACTCTCGTCCGTT
GTGTCCAGTTCGCTGGTCCGCACGCTGTTCGCCCAGTCGGAGGAGTCTAG
ATCCTGTCCTGCTCCTCGCGCCTGATCCTCCTGCTGTTCCTGGGCGTTGA
GGCTAGCTCGACTGGCGAGACCATCGCAAATATTGGCGGGATCTGACGGC
AGCTCCACATAAAGGTTCGTCTGGCGCAAAGCCATTAGCTGTAGATCGCG
GTGCAGGCTGATGGGATTCTTGGACAGGTTGAGCATGTGAAGAGTCCGCA
ACTCCTCCAGTTGTGACCGCGTGGGCATCTCGTCAATACAATTTTCGTTG
AGAAAAGCAAACCGCAGCTTCTGCATGGCCATCAGCATCCTGGGCAGCCG
TCGCAATCGATTCCCCTTAAGATTCAGATGCACCAAATTTCCCAGCAACG
CCATGGTCAGTGGCACTTCGCTGAGTTCGCAGCCCTCGGCTGTTAGCCAA
CGCAGGGAGGACAGAGCGCCTATGGCATCGGGCAACTTCTTCAAGGGATT
TCCCCGTACGCCCAGCGTCTCGAGGTGTTCACAGTTACGAATTTCGTTGG
GCAGCTCCAGGAGCCCAGTATTATTGCACCAGAACGTCTCCAGCTGAGTG
AGGTATCCCAGTTCGGGTGGCAAACTACTAATGTTATTGCAGCTGATGTT
GAGAAACTTCAGCCGGACCAAACGACAGATGCAGAGCGGGAATTCGTCCA
GTTTATTGTAGTCCAACGTGAGGACCTGAAGTCGCATCAAACTACCAATG
GAGGATGGAATCTTTGTTAGCTTGTTTTGGTTGA

BO06292.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:38:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG10307-PA 1026 CG10307-RA 158..1023 884..19 4330 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:54:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG10307-RB 1177 CG10307-RB 243..1108 884..19 4330 100 Minus
CG10307-RA 1362 CG10307-RA 428..1293 884..19 4330 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:54:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21689282..21689868 863..277 2935 100 Minus
2R 25286936 2R 21689926..21690184 277..19 1295 100 Minus
Blast to na_te.dros performed on 2015-02-04 19:54:29 has no hits.

BO06292.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:45:30 Download gff for BO06292.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10307-PA 159..1026 16..883 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:16:44 Download gff for BO06292.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10307-PA 159..1026 16..883 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:21:28 Download gff for BO06292.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10307-RA 290..1164 10..883 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:44:54 Download gff for BO06292.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10307-RA 429..1303 10..883 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:44:54 Download gff for BO06292.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21689201..21689222 862..883 100 -> Minus
2R 21689284..21689868 277..861 100 -> Minus
2R 21689927..21690194 10..276 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:21:28 Download gff for BO06292.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17577432..17577699 10..276 98   Minus
arm_2R 17576706..17576727 862..883 100 -> Minus
arm_2R 17576789..17577373 277..861 100 -> Minus

BO06292.5prime Sequence

867 bp (785 high quality bases) assembled on 2005-12-03

> BO06292.5prime
GAAGTTATCAGTCGACATGGAGAAGGTTTGTCAGTTTTTCCGCAACAACT
ACGTGCTGGCCAATTGCGAGGATGCCATATACAAAAAGGCATTCTCCCTG
AATCTGTCCCACTACCAAATCTCCGACGTTCCGGGCATCATAGAGAAGTG
CGAGACGCTGATGAAGCTGTTCCTCAACCAAAACAAGCTAACAAAGATTC
CATCCTCCATTGGTAGTTTGATGCGACTTCAGGTCCTCACGTTGGACTAC
AATAAACTGGACGAATTCCCGCTCTGCATCTGTCGTTTGGTCCGGCTGAA
GTTTCTCAACATCAGCTGCAATAACATTAGTAGTTTGCCACCCGAACTGG
GATACCTCACTCAGCTGGAGACGTTCTGGTGCAATAATACTGGGCTCCTG
GAGCTGCCCAACGAAATTCGTAACTGTGAACACCTCGAGACGCTGGGCGT
ACGGGGAAATCCCTTGAAGAAGTTGCCCGATGCCATAGGCGCTCTGTCCT
CCCTGCGTTGGCTAACAGCCGAGGGCTGCGAACTCAGCGAAGTGCCACTG
ACCATGGCGTTGCTGGGAAATTTGGTGCATCTGAATCTTAAGGGGAATCG
ATTGCGACGGCTGCCCAGGATGCTGATGGCCATGCAGAAGCTGCGGTTTG
CTTTTCTCAACGAAAATTGTATTGACGAGATGCCCACGCGGTCACAACTG
GAGGAGTTGCGGACTCTTCACATGCTCAACCTGTCCAAGAATCCCATCAG
CCTGCACCGCGATCTACAGCTAATGGCTTTGCGCCAGACGAACCTTTATG
TGGAGCTGCCGTCAGATCCCGCCAATATTTGCGATGGTCTCGCCAGTCGA
GCTAGCCCTCACGCCCA

BO06292.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:38:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG10307-PA 1026 CG10307-RA 1..841 17..857 4205 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:03:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG10307-RB 1177 CG10307-RB 82..936 13..867 4230 99.8 Plus
CG10307-RA 1362 CG10307-RA 267..1121 13..867 4230 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:03:36
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21689282..21689868 195..781 2935 100 Plus
2R 25286936 2R 21689039..21689222 13..196 920 100 Plus
2R 25286936 2R 21689926..21690012 781..867 390 96.6 Plus
Blast to na_te.dros performed on 2015-02-13 01:03:40 has no hits.

BO06292.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:45:32 Download gff for BO06292.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10307-PA 1..850 17..866 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:16:46 Download gff for BO06292.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10307-PA 1..850 17..866 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:28:42 Download gff for BO06292.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10307-RA 121..981 7..866 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:52:31 Download gff for BO06292.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10307-RA 260..1120 7..866 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:52:31 Download gff for BO06292.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21689032..21689222 7..196 98 -> Plus
2R 21689284..21689868 197..781 100 -> Plus
2R 21689927..21690011 782..866 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:28:42 Download gff for BO06292.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17576537..17576727 7..196 98 -> Plus
arm_2R 17576789..17577373 197..781 100 -> Plus
arm_2R 17577432..17577516 782..866 97   Plus

BO06292.complete Sequence

1057 bp (1057 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ630332

> BO06292.complete
GAAGTTATCAGTCGACATGGAGAAGGTTTGTCAGTTTTTCCGCAACAACT
ACGTGCTGGCCAATTGCGAGGATGCCATATACAAAAAGGCATTCTCCCTG
AATCTGTCCCACTACCAAATCTCCGACGTTCCGGGCATCATAGAGAAGTG
CGAGACGCTGATGAAGCTGTTCCTCAACCAAAACAAGCTAACAAAGATTC
CATCCTCCATTGGTAGTTTGATGCGACTTCAGGTCCTCACGTTGGACTAC
AATAAACTGGACGAATTCCCGCTCTGCATCTGTCGTTTGGTCCGGCTGAA
GTTTCTCAACATCAGCTGCAATAACATTAGTAGTTTGCCACCCGAACTGG
GATACCTCACTCAGCTGGAGACGTTCTGGTGCAATAATACTGGGCTCCTG
GAGCTGCCCAACGAAATTCGTAACTGTGAACACCTCGAGACGCTGGGCGT
ACGGGGAAATCCCTTGAAGAAGTTGCCCGATGCCATAGGCGCTCTGTCCT
CCCTGCGTTGGCTAACAGCCGAGGGCTGCGAACTCAGCGAAGTGCCACTG
ACCATGGCGTTGCTGGGAAATTTGGTGCATCTGAATCTTAAGGGGAATCG
ATTGCGACGGCTGCCCAGGATGCTGATGGCCATGCAGAAGCTGCGGTTTG
CTTTTCTCAACGAAAATTGTATTGACGAGATGCCCACGCGGTCACAACTG
GAGGAGTTGCGGACTCTTCACATGCTCAACCTGTCCAAGAATCCCATCAG
CCTGCACCGCGATCTACAGCTAATGGCTTTGCGCCAGACGAACCTTTATG
TGGAGCTGCCGTCAGATCCCGCCAATATTTGCGATGGTCTCGCCAGTCGA
GCTAGCCTCAACGCCCAGGAACAGCAGGAGGATCAGGCGCGAGGAGCAGG
ACAGGATCTAGACTCCTCCGACTGGGCGAACAGCGTGCGGACCAGCGAAC
TGGACACAACGGACGAGAGTGCGCTGGAGAACAACATCGAGGATCTGAGT
GTCATGCTGCCGGAAATGTCGCGCTTTGTCACCACCTTTGCAAGCTTTCT
AGACCAT

BO06292.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:49:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG10307-RB 1026 CG10307-PB 1..1023 17..1039 5115 100 Plus
CG10307-RA 1026 CG10307-PA 1..1023 17..1039 5115 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:49:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG10307-RB 1177 CG10307-RB 82..1108 13..1039 5135 100 Plus
CG10307-RA 1362 CG10307-RA 267..1293 13..1039 5135 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:49:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21689282..21689868 195..781 2935 100 Plus
2R 25286936 2R 21689926..21690184 781..1039 1295 100 Plus
2R 25286936 2R 21689039..21689222 13..196 920 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:49:45 has no hits.

BO06292.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:24:55 Download gff for BO06292.complete
Subject Subject Range Query Range Percent Splice Strand
CG10307-RA 1..1026 17..1042 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:49:21 Download gff for BO06292.complete
Subject Subject Range Query Range Percent Splice Strand
CG10307-RA 121..1164 7..1048 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:26:01 Download gff for BO06292.complete
Subject Subject Range Query Range Percent Splice Strand
CG10307-RA 132..1154 17..1041 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:24:55 Download gff for BO06292.complete
Subject Subject Range Query Range Percent Splice Strand
CG10307-RA 121..1164 7..1048 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:56:50 Download gff for BO06292.complete
Subject Subject Range Query Range Percent Splice Strand
CG10307-RA 271..1293 17..1041 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:56:50 Download gff for BO06292.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21689043..21689222 17..196 100 -> Plus
2R 21689284..21689868 197..781 100 -> Plus
2R 21689927..21690184 782..1041 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:26:01 Download gff for BO06292.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17576548..17576727 17..196 100 -> Plus
arm_2R 17576789..17577373 197..781 100 -> Plus
arm_2R 17577432..17577689 782..1041 99   Plus

BO06292.pep Sequence

Translation from 16 to 1057

> BO06292.pep
MEKVCQFFRNNYVLANCEDAIYKKAFSLNLSHYQISDVPGIIEKCETLMK
LFLNQNKLTKIPSSIGSLMRLQVLTLDYNKLDEFPLCICRLVRLKFLNIS
CNNISSLPPELGYLTQLETFWCNNTGLLELPNEIRNCEHLETLGVRGNPL
KKLPDAIGALSSLRWLTAEGCELSEVPLTMALLGNLVHLNLKGNRLRRLP
RMLMAMQKLRFAFLNENCIDEMPTRSQLEELRTLHMLNLSKNPISLHRDL
QLMALRQTNLYVELPSDPANICDGLASRASLNAQEQQEDQARGAGQDLDS
SDWANSVRTSELDTTDESALENNIEDLSVMLPEMSRFVTTFASFLDH

BO06292.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG10307-PB 341 CG10307-PB 1..341 1..341 1762 100 Plus
CG10307-PA 341 CG10307-PA 1..341 1..341 1762 100 Plus
scrib-PC 1247 CG43398-PC 112..357 29..270 263 32.5 Plus
scrib-PI 1711 CG43398-PI 112..357 29..270 263 32.5 Plus
scrib-PP 1729 CG43398-PP 112..357 29..270 263 32.5 Plus
scrib-PC 1247 CG43398-PC 65..284 28..249 234 28.8 Plus
scrib-PI 1711 CG43398-PI 65..284 28..249 234 28.8 Plus
scrib-PC 1247 CG43398-PC 42..254 28..242 226 30.7 Plus
scrib-PI 1711 CG43398-PI 42..254 28..242 226 30.7 Plus
scrib-PC 1247 CG43398-PC 180..352 28..200 221 31.2 Plus
scrib-PI 1711 CG43398-PI 180..352 28..200 221 31.2 Plus
scrib-PC 1247 CG43398-PC 134..348 28..244 217 30.4 Plus
scrib-PI 1711 CG43398-PI 134..348 28..244 217 30.4 Plus
scrib-PC 1247 CG43398-PC 156..433 27..300 210 27.5 Plus
scrib-PI 1711 CG43398-PI 156..433 27..300 210 27.5 Plus
scrib-PC 1247 CG43398-PC 25..210 58..244 197 29.8 Plus
scrib-PC 1247 CG43398-PC 216..384 18..192 197 32 Plus
scrib-PI 1711 CG43398-PI 25..210 58..244 197 29.8 Plus
scrib-PI 1711 CG43398-PI 216..384 18..192 197 32 Plus