Clone Sequence Records
BO06307.3prime Sequence
940 bp (847 high quality bases) assembled on 2005-12-03
> BO06307.3prime
ATGGTCTAGAAAGCTTGCCAAGCCCTCCTCGGATGTGGGCAGCCAAAAAG
CCATGTTGGTGCACGCGGACGCCAGCATCATGTATTTTGGATTGAACTGA
ACGCATTGCACCGGTCCCGGATGGTCACCATTCAGTACGGACACCTTATT
GCCAGTGTCGGCATTCCAGATGTGCACTCGTCCATCGGTGCTGCCTGAAA
AGATGAACTGCGAGTCTGGGCTGAAGCTTGCCTCGATGGGAATGCCCTTG
TTGTTTGGATAGCCCGTGAACGTTTGTAGCGGAGTGCCGTGGAAGGCATC
TACGAGCCGGATGACCGATCCATTCGTGCTGATCAGAATTGTTTTGCCGT
CACGGGAGAACTTAAGGCCAGTCCAGTCGCATTCCTTCTCCTGATTAAGT
TTAAATGTGACGAAGGGGCCTTTGTCGAAAGAGCGAAGGTCGTACAATTT
AATGCTTTCCGAGTTAACGCCAGCGGCGAAGATCAAGCCCTCGGGATCGT
AGGCAGCAATGGGTCGTCCAGAGAGATGCATCAGTCCCTGGCAGTTGGGC
GAGCGCAAGTCCCACAGGCGCAGCGTCTTGTCCAGCGAGCCGGAGAGAAA
GGTGTCCTCCACCGGCGAAATGCACAGCGAGATAACCTTCTTGGTGTGGC
CGGGGAAGTAGCGCAGATATTTGTTGTCGTGCAGGCTGAGATAGCGTATG
GTGTCGTCCACCTTGGTGGAGCTATGGATGGCCGTGTTGTTGGCGTGCGT
AAAGTGGATTAAATCCACTCCATACTTCTTCGAGTTCACCGTGCGCGACT
GCGTCCCCTTTTCGCAGTCGTAGATCACGATCTGGTCATCCTCGCTGCAN
GATATTAGATGTTCGCCGTTGGGCGCAAAATCGATGGCGTTGATCTTGTC
CGTGTTCTCTCGGAAGATCTTGGCCACCTTAAACTGCGCA
BO06307.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:38:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17293-PA | 954 | CG17293-RA | 37..951 | 933..19 | 4556 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:41:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wdr82-RA | 1089 | CG17293-RA | 95..1017 | 940..19 | 4579 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:40:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8374563..8375477 | 933..19 | 4564 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 22:41:02 has no hits.
BO06307.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:45:51 Download gff for
BO06307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17293-PA | 30..954 | 18..939 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:17:10 Download gff for
BO06307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17293-PA | 30..954 | 18..939 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:43:39 Download gff for
BO06307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wdr82-RA | 96..1022 | 13..939 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:44:50 Download gff for
BO06307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wdr82-RA | 96..1022 | 13..939 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:44:50 Download gff for
BO06307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8374556..8375482 | 13..939 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:43:39 Download gff for
BO06307.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8374556..8375482 | 13..939 | 99 | | Minus |
BO06307.5prime Sequence
924 bp (873 high quality bases) assembled on 2005-12-03
> BO06307.5prime
GAAGTTATCAGTCGACATGAAGATAAAACTAATAGATTCGGTGGTGCGCA
GTTTTAAGGTGGCCAAGATCTTCCGAGAGAACACGGACAAGATCAACGCC
ATCGATTTTGCGCCCAACGGCGAACATCTAATATCCTGCAGCGAGGATGA
CCAGATCGTGATCTACGACTGCGAAAAGGGGACGCAGTCGCGCACGGTGA
ACTCGAAGAAGTATGGAGTGGATTTAATCCACTTTACGCACGCCAACAAC
ACGGCCATCCATAGCTCCACCAAGGTGGACGACACCATACGCTATCTCAG
CCTGCACGACAACAAATATCTGCGCTACTTCCCCGGCCACACCAAGAAGG
TTATCTCGCTGTGCATTTCGCCGGTGGAGGACACCTTTCTCTCCGGCTCG
CTGGACAAGACGCTGCGCCTGTGGGACTTGCGCTCGCCCAACTGCCAGGG
ACTGATGCATCTCTCTGGACGACCCATTGCTGCCTACGATCCCGAGGGCT
TGATCTTCGCCGCTGGCGTTAACTCGGAAAGCATTAAATTGTACGACCTT
CGCTCTTTCGACAAAGGCCCCTTCGTCACATTTAAACTTAATCAGGAGAA
GGAATGCGACTGGACTGGCCTTAAGTTCTCCCGTGACGGCAAAACAATTC
TGATCAGCACGAATGGATCGGTCATCCGGCTCGTAGATGCCTTCCACGGC
ACTCCGCTACAAACGTTCACGGGCTATCCAAACAACAAGGGCATTCCCAT
CGAGGCAAGCTTCAGCCCAGACTCGCAGTTCATCTTTTCAGGCAGCACCG
ATGGACGAGTGCACATCTGGAATGCCGACACTGGCAATAAGGTGTCCGTA
CTGAATGGTGACCATCCGGGGACGGTGNCATGCGTTCAGTTCAATCCAAA
TACATGATGCTGGCGTCCGCGTGC
BO06307.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:38:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17293-PA | 954 | CG17293-RA | 1..884 | 17..900 | 4326 | 99.5 | Plus |
| CG17293-PA | 954 | CG17293-RA | 883..909 | 898..924 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:36:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wdr82-RA | 1089 | CG17293-RA | 67..975 | 17..924 | 4464 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:36:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8374527..8375435 | 17..924 | 4439 | 99.4 | Plus |
Blast to na_te.dros performed on 2015-02-10 15:36:16 has no hits.
BO06307.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:45:52 Download gff for
BO06307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17293-PA | 1..909 | 17..924 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:17:12 Download gff for
BO06307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17293-PA | 1..909 | 17..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 05:59:43 Download gff for
BO06307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wdr82-RA | 58..975 | 9..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:11:22 Download gff for
BO06307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wdr82-RA | 58..975 | 9..924 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:11:22 Download gff for
BO06307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8374518..8375435 | 9..924 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 05:59:43 Download gff for
BO06307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8374518..8375435 | 9..924 | 99 | | Plus |
BO06307.complete Sequence
985 bp (985 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630338
> BO06307.complete
GAAGTTATCAGTCGACATGAAGATAAAACTAATAGATTCGGTGGTGCGCA
GTTTTAAGGTGGCCAAGATCTTCCGAGAGAACACGGACAAGATCAACGCC
ATCGATTTTGCGCCCAACGGCGAACATCTAATATCCTGCAGCGAGGATGA
CCAGATCGTGATCTACGACTGCGAAAAGGGGACGCAGTCGCGCACGGTGA
ACTCGAAGAAGTATGGAGTGGATTTAATCCACTTTACGCACGCCAACAAC
ACGGCCATCCATAGCTCCACCAAGGTGGACGACACCATACGCTATCTCAG
CCTGCACGACAACAAATATCTGCGCTACTTCCCCGGCCACACCAAGAAGG
TTATCTCGCTGTGCATTTCGCCGGTGGAGGACACCTTTCTCTCCGGCTCG
CTGGACAAGACGCTGCGCCTGTGGGACTTGCGCTCGCCCAACTGCCAGGG
ACTGATGCATCTCTCTGGACGACCCATTGCTGCCTACGATCCCGAGGGCT
TGATCTTCGCCGCTGGCGTTAACTCGGAAAGCATTAAATTGTACGACCTT
CGCTCTTTCGACAAAGGCCCCTTCGTCACATTTAAACTTAATCAGGAGAA
GGAATGCGACTGGACTGGCCTTAAGTTCTCCCGTGACGGCAAAACAATTC
TGATCAGCACGAATGGATCGGTCATCCGGCTCGTAGATGCCTTCCACGGC
ACTCCGCTACAAACGTTCACGGGCTATCCAAACAACAAGGGCATTCCCAT
CGAGGCAAGCTTCAGCCCAGACTCGCAGTTCATCTTTTCAGGCAGCACCG
ATGGACGAGTGCACATCTGGAATGCCGACACTGGCAATAAGGTGTCCGTA
CTGAATGGTGACCATCCGGGACCGGTGCAATGCGTTCAGTTCAATCCAAA
ATACATGATGCTGGCGTCCGCGTGCACCAACATGGCTTTTTGGCTGCCCA
CATCCGAGGAGGGCTTGGCAAGCTTTCTAGACCAT
BO06307.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:38:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wdr82-RA | 954 | CG17293-PA | 1..951 | 17..967 | 4755 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:38:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wdr82-RA | 1089 | CG17293-RA | 67..1017 | 17..967 | 4755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:38:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8374527..8375477 | 17..967 | 4755 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:38:08 has no hits.
BO06307.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:24:40 Download gff for
BO06307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17293-RA | 1..954 | 17..968 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:49:02 Download gff for
BO06307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17293-RA | 38..1002 | 9..973 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:57:31 Download gff for
BO06307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wdr82-RA | 67..1017 | 17..969 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:24:40 Download gff for
BO06307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17293-RA | 38..1002 | 9..973 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:05:18 Download gff for
BO06307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wdr82-RA | 67..1017 | 17..969 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:05:18 Download gff for
BO06307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8374527..8375477 | 17..969 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:57:31 Download gff for
BO06307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8374527..8375477 | 17..969 | 99 | | Plus |
BO06307.pep Sequence
Translation from 16 to 985
> BO06307.pep
MKIKLIDSVVRSFKVAKIFRENTDKINAIDFAPNGEHLISCSEDDQIVIY
DCEKGTQSRTVNSKKYGVDLIHFTHANNTAIHSSTKVDDTIRYLSLHDNK
YLRYFPGHTKKVISLCISPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLS
GRPIAAYDPEGLIFAAGVNSESIKLYDLRSFDKGPFVTFKLNQEKECDWT
GLKFSRDGKTILISTNGSVIRLVDAFHGTPLQTFTGYPNNKGIPIEASFS
PDSQFIFSGSTDGRVHIWNADTGNKVSVLNGDHPGPVQCVQFNPKYMMLA
SACTNMAFWLPTSEEGLASFLDH
BO06307.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:23:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wdr82-PA | 317 | CG17293-PA | 1..317 | 1..317 | 1685 | 100 | Plus |
| CG3515-PA | 395 | CG3515-PA | 1..311 | 1..311 | 532 | 36.2 | Plus |
| wds-PB | 361 | CG17437-PB | 71..346 | 22..302 | 294 | 29.1 | Plus |
| wds-PA | 361 | CG17437-PA | 71..346 | 22..302 | 294 | 29.1 | Plus |
| CG3436-PC | 347 | CG3436-PC | 57..347 | 25..315 | 204 | 27.2 | Plus |
| wds-PB | 361 | CG17437-PB | 44..282 | 74..323 | 159 | 23.4 | Plus |
| wds-PA | 361 | CG17437-PA | 44..282 | 74..323 | 159 | 23.4 | Plus |
