Clone BO06322 Report

Search the DGRC for BO06322

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:63
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG11236-RA
Protein status:BO06322.pep: validated full length
Sequenced Size:1057

Clone Sequence Records

BO06322.3prime Sequence

964 bp (759 high quality bases) assembled on 2005-12-03

> BO06322.3prime
ATGGTCTAGAAAGCTTGCTAATTTGGAACCGTTCTTGGCGGCCAACAGGA
TATTGAGGACATCGTCGGCACAGCCCCAGCACAAAGTGACTCCACTGCCG
CCATGTCCATAGTTGTGGATGAGGAGCTTGCGGCCGCGGCGCTCGGCTTC
CAGTCGGAGTTGGGTGCGACCCGGCCGGAGACCTACCCAATCAAAGAGGC
ACTCCGTGTGCTCCAAACCAGGAATGTACCGCTGACAGCCATCGACGATC
ATCCGCCTGTCGTTCTGGCAGACTTTAGTGTTGTAGTCCCGCTCCTGATG
GGTTCCGCCCAGGACAACACTTTCGGTGTTGGGTATAATATAGTTGCCAT
CATCACTCTCGTCCAGCACGGCAGAGAAAATCCAGTTGGCCCTCACCCGG
GAAACTTGGCCACGCACTGCGTACATTTGATCGTCGTTTAGTAGGGTCTT
AGAGCCCAATCCGGAGCAATTGACTATCACATCGTACTCGGAATCGGCTA
CAAATGCATCCAGGTCTGTAATCCTTTTCCGGACAACAACACCTCCATTT
CGGGTGAAACGCTTCATCAAATACGGCAGTAGCTTAATGGGCTCCGAGGT
GTAGGTAACAAAGGATAAACCAGACGTGAACTTAACGCTGCGACCTTTAT
TGTAGGCAGCCAGCTGTTCCTTGGACAGATCCACTGCTCCATAGACAATG
TCACGCCAAAAATCTTCGACCGTGTCCACCGTTGAGGTGCTCAGCCGAAT
GCAGGGTAGCAGACAAACGCCAGCCTCTCCGGCATCCTCGCTCAGCCAGA
TCTTCTCCAAAAATTGGTGCATGCTCTTCGACCACTTGTAGACTTTCGCC
TGCGAAGTGCCGCCCAGAAGGTACGGACCCCAGAGACCAGCCGAACCATC
TCCAGTTGTGTTAAGCGTGAAGTCCTCCGATATGATCGTCACCTTTTATG
GTGTCTTTCCATCG

BO06322.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG11236-PA 1026 CG11236-RA 96..1023 946..19 4615 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:40:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG11236-RA 1181 CG11236-RA 119..1064 964..19 4670 99.7 Minus
CG11236-RB 1172 CG11236-RB 119..1055 964..19 4525 98.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:40:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6803946..6804255 328..19 1550 100 Minus
2L 23513712 2L 6803592..6803888 625..329 1485 100 Minus
2L 23513712 2L 6803310..6803524 838..624 1075 100 Minus
2L 23513712 2L 6803129..6803254 964..839 570 96.8 Minus
Blast to na_te.dros performed on 2015-02-11 22:40:06 has no hits.

BO06322.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:46:20 Download gff for BO06322.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11236-PA 78..1026 15..964 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:17:48 Download gff for BO06322.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11236-PA 78..1026 15..964 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:41:36 Download gff for BO06322.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11236-RA 119..1068 14..964 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:20:52 Download gff for BO06322.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11236-RA 119..1068 14..964 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:20:52 Download gff for BO06322.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 6803129..6803254 839..964 97 -> Minus
2L 6803310..6803522 626..838 100 -> Minus
2L 6803592..6803888 329..625 100 -> Minus
2L 6803946..6804259 14..328 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:41:36 Download gff for BO06322.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6803129..6803254 839..964 97 -> Minus
arm_2L 6803310..6803522 626..838 100 -> Minus
arm_2L 6803592..6803888 329..625 100 -> Minus
arm_2L 6803946..6804259 14..328 99   Minus

BO06322.5prime Sequence

939 bp (838 high quality bases) assembled on 2005-12-03

> BO06322.5prime
GAAGTTATCAGTCGACATGCCTAACATTGCAGTTATCGGTGCCGGGGTTA
ATGGTGTTGCCAGTGCCATTAAGATACTGGAACACTATGTGAACGATGGA
AAGACACCCATAAAGGTGACGATCATATCGGAGGACTTCACGCCTAACAC
AACTGGAGATGGTTCGGCTGGTCTCTGGGGTCCGTACCTTCTGGGCGGCA
CTTCGCAGGCGAAAGTCTACAAGTGGTCGAAGAGCATGCACCAATTTTTG
GAGAAGATCTGGCTGAGCGAGGATGCCGGAGAGGCTGGCGTTTGTCTGCT
ACCCTGCATTCGGCTGAGCACCTCAACGGTGGACACGGTCGAAGATTTTT
GGCGTGACATTGTCTATGGAGCAGTGGATCTGTCCAAGGAACAGCTGGCT
GCCTACAATAAAGGTCGCAGCGTTAAGTTCACGTCTGGTTTATCCTTTGT
TACCTACACCTCGGAGCCCATTAAGCTACTGCCGTATTTGATGAAGCGTT
TCACCCGAAATGGAGGTGTTGTTGTCCGGAAAAGGATTACAGACCTGGAT
GCATTTGTAGCCGATTCCGAGTACGATGTGATAGTCAATTGCTCCGGATT
GGGCTCTAAGACCCTACTAAACGACGATCAAATGTACGCAGTGCGTGGCC
AAGTTTCCCGGGTGAGGGCCAACTGGATTTTCTCTGCCGTGCTGGACGAG
AGTGATGATGGCAACTATATTATACCCAACACCGAAAGTGTTGTCCTGGG
CGGAACCCATCAGGAGCGGGACTACAACACTAAAGTCTGCCAGAACGACA
GGCGGATGATCGTCGATGGCTGTCAGCGGTACATTCCTGGTTTGGAGCAC
ACGGAGTGCCTCTTTGATTGGGTAGGTCTCCGGGCGGGTCGCACCCAACT
CCGACTGGAAGCCGAGCGCCGCGGCCGCAAGCTCCTCAT

BO06322.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG11236-PA 1026 CG11236-RA 1..923 17..939 4590 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:41:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG11236-RA 1181 CG11236-RA 42..964 17..939 4600 99.9 Plus
CG11236-RB 1172 CG11236-RB 42..955 17..939 4455 98.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6803592..6803888 433..729 1485 100 Plus
2L 23513712 2L 6803310..6803524 220..434 1075 100 Plus
2L 23513712 2L 6803946..6804155 730..939 1035 99.5 Plus
2L 23513712 2L 6803052..6803254 17..219 1015 100 Plus
Blast to na_te.dros performed on 2015-02-11 22:41:47 has no hits.

BO06322.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:46:21 Download gff for BO06322.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11236-PA 1..923 17..939 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:17:49 Download gff for BO06322.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11236-PA 1..923 17..939 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:43:45 Download gff for BO06322.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11236-RA 38..964 10..939 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:44:57 Download gff for BO06322.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11236-RA 38..964 10..939 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:44:57 Download gff for BO06322.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6803946..6804155 730..939 99   Plus
2L 6803310..6803522 220..432 100 -> Plus
2L 6803048..6803254 10..219 98 -> Plus
2L 6803592..6803888 433..729 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:43:45 Download gff for BO06322.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6803048..6803254 10..219 98 -> Plus
arm_2L 6803310..6803522 220..432 100 -> Plus
arm_2L 6803592..6803888 433..729 100 -> Plus
arm_2L 6803946..6804155 730..939 99   Plus

BO06322.complete Sequence

1057 bp (1057 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ630345

> BO06322.complete
GAAGTTATCAGTCGACATGCCTAACATTGCAGTTATCGGTGCCGGGGTTA
ATGGTGTTGCCAGTGCCATTAAGATACTGGAACACTATGTGAACGATGGA
AAGACACCCATAAAGGTGACGATCATATCGGAGGACTTCACGCCTAACAC
AACTGGAGATGGTTCGGCTGGTCTCTGGGGTCCGTACCTTCTGGGCGGCA
CTTCGCAGGCGAAAGTCTACAAGTGGTCGAAGAGCATGCACCAATTTTTG
GAGAAGATCTGGCTGAGCGAGGATGCCGGAGAGGCTGGCGTTTGTCTGCT
ACCCTGCATTCGGCTGAGCACCTCAACGGTGGACACGGTCGAAGATTTTT
GGCGTGACATTGTCTATGGAGCAGTGGATCTGTCCAAGGAACAGCTGGCT
GCCTACAATAAAGGTCGCAGCGTTAAGTTCACGTCTGGTTTATCCTTTGT
TACCTACACCTCGGAGCCCATTAAGCTACTGCCGTATTTGATGAAGCGTT
TCACCCGAAATGGAGGTGTTGTTGTCCGGAAAAGGATTACAGACCTGGAT
GCATTTGTAGCCGATTCCGAGTACGATGTGATAGTCAATTGCTCCGGATT
GGGCTCTAAGACCCTACTAAACGACGATCAAATGTACGCAGTGCGTGGCC
AAGTTTCCCGGGTGAGGGCCAACTGGATTTTCTCTGCCGTGCTGGACGAG
AGTGATGATGGCAACTATATTATACCCAACACCGAAAGTGTTGTCCTGGG
CGGAACCCATCAGGAGCGGGACTACAACACTAAAGTCTGCCAGAACGACA
GGCGGATGATCGTCGATGGCTGTCAGCGGTACATTCCTGGTTTGGAGCAC
ACGGAGTGCCTCTTTGATTGGGTAGGTCTCCGGCCGGGTCGCACCCAACT
CCGACTGGAAGCCGAGCGCCGCGGCCGCAAGCTCCTCATCCACAACTATG
GACATGGCGGCAGTGGAGTCACTTTGTGCTGGGGCTGTGCCGACGATGTC
CTCAATATCCTGTTGGCCGCCAAGAACGGTTCCAAATTAGCAAGCTTTCT
AGACCAT

BO06322.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:40:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG11236-RA 1026 CG11236-PA 1..1023 17..1039 5115 100 Plus
CG11236-RB 1017 CG11236-PB 1..1014 17..1039 4945 99.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:40:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG11236-RA 1181 CG11236-RA 42..1064 17..1039 5115 100 Plus
CG11236-RB 1172 CG11236-RB 42..1055 17..1039 4945 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:40:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6803946..6804255 730..1039 1550 100 Plus
2L 23513712 2L 6803592..6803888 433..729 1485 100 Plus
2L 23513712 2L 6803310..6803524 220..434 1075 100 Plus
2L 23513712 2L 6803052..6803254 17..219 1015 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:40:01 has no hits.

BO06322.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:24:28 Download gff for BO06322.complete
Subject Subject Range Query Range Percent Splice Strand
CG11236-RA 1..1026 17..1043 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:48:46 Download gff for BO06322.complete
Subject Subject Range Query Range Percent Splice Strand
CG11236-RA 16..1046 10..1044 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:57:00 Download gff for BO06322.complete
Subject Subject Range Query Range Percent Splice Strand
CG11236-RA 42..1064 17..1041 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:24:28 Download gff for BO06322.complete
Subject Subject Range Query Range Percent Splice Strand
CG11236-RA 16..1046 10..1044 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:24:23 Download gff for BO06322.complete
Subject Subject Range Query Range Percent Splice Strand
CG11236-RA 42..1064 17..1041 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:24:23 Download gff for BO06322.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6803052..6803254 17..219 100 -> Plus
2L 6803310..6803522 220..432 100 -> Plus
2L 6803592..6803888 433..729 100 -> Plus
2L 6803946..6804255 730..1041 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:57:00 Download gff for BO06322.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6803052..6803254 17..219 100 -> Plus
arm_2L 6803310..6803522 220..432 100 -> Plus
arm_2L 6803592..6803888 433..729 100 -> Plus
arm_2L 6803946..6804255 730..1041 99   Plus

BO06322.pep Sequence

Translation from 16 to 1057

> BO06322.pep
MPNIAVIGAGVNGVASAIKILEHYVNDGKTPIKVTIISEDFTPNTTGDGS
AGLWGPYLLGGTSQAKVYKWSKSMHQFLEKIWLSEDAGEAGVCLLPCIRL
STSTVDTVEDFWRDIVYGAVDLSKEQLAAYNKGRSVKFTSGLSFVTYTSE
PIKLLPYLMKRFTRNGGVVVRKRITDLDAFVADSEYDVIVNCSGLGSKTL
LNDDQMYAVRGQVSRVRANWIFSAVLDESDDGNYIIPNTESVVLGGTHQE
RDYNTKVCQNDRRMIVDGCQRYIPGLEHTECLFDWVGLRPGRTQLRLEAE
RRGRKLLIHNYGHGGSGVTLCWGCADDVLNILLAAKNGSKLASFLDH

BO06322.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:23:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG11236-PA 341 CG11236-PA 1..341 1..341 1799 100 Plus
CG11236-PB 338 CG11236-PB 1..338 1..341 1771 99.1 Plus
CG12338-PB 335 CG12338-PB 2..318 3..325 408 31.8 Plus
CG12338-PA 335 CG12338-PA 2..318 3..325 408 31.8 Plus