Clone BO06323 Report

Search the DGRC for BO06323

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:63
Well:23
Vector:pDNR-Dual
Associated Gene/TranscriptDat-RA
Protein status:BO06323.pep: validated not full length
Sequenced Size:754

Clone Sequence Records

BO06323.3prime Sequence

752 bp (751 high quality bases) assembled on 2005-12-03

> BO06323.3prime
ATGGTCTAGAAAGCTTGCCAGCTTGGTCTGCGCCGCCTTCGCGGGACCCA
CTTCCTTGGCCATCACCTGTATGCCCACGTGCGGGGCCGCCGGCTTGAAG
ACCACCTCTCCCTGAGGCTTGTAGTCGGCGAACTGCATGCGGAACACCTC
GTGGAAGCCCAGCTTCTCCATCACCCGGGCGGAGTAGTGGCTGGAGCAGA
GCACGTGGTACACATTGATGCCGTTCTCCCGCATGTACTCGTACGCCCTC
TCCGTCAGGCGGCCTGCGATGCCCAGGCCCCGGTAGTTGGTGTCCACCGA
CAGGATCTTGCCGTCCAGGATGAGCTCCTCGTCGGGATACACGTCGAAGA
TGTTGAACTGCTCCTCCACGTGGTCCATCAGCGAGAGGATCTTCTTGAAT
TTGGGATGTTCACAGGAGTCGGCCGCCTTTTCGGGCACATCATCGGGGGA
CGGACGCCTCATAAGTCCATTTAGGAACACACCGATAATCTCGCCCTTCT
TGTTGACCGCCTTGTAGGAGCAGTTGTCGGGTAGCGGTTTCAGGGAGTAC
TTCTCCAGCTCCTTGCACTCGCCAAGGTCGAGGAAGGTGTTCAGCGGTTC
ATCCTTGAAGAAAAAGGTCTTGAGCATGGCTATCACCGCCTCCCCATCCT
CCGGCTGGATCAGTTCGATGGTGTAGGGGCAGTCCTGGTCGACGGGGCAT
GCGGCTGGCTTCCCAGAGACGGTCAATGCGTCCTCCATGTCGACTGATAA
CT

BO06323.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG3318-PA 723 Dat-RA 1..720 738..19 3600 100 Minus
CG3318-PB 828 Dat-RB 106..825 738..19 3600 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:07:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dat-RB 1588 CG3318-RB 652..1371 738..19 3600 100 Minus
Dat-RA 1275 CG3318-RA 339..1058 738..19 3600 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:07:48
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24157113..24157545 451..19 2165 100 Minus
2R 25286936 2R 24156895..24157049 605..451 775 100 Minus
2R 25286936 2R 24155843..24155978 738..603 680 100 Minus
Blast to na_te.dros performed on 2015-02-13 06:07:49 has no hits.

BO06323.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:46:22 Download gff for BO06323.3prime
Subject Subject Range Query Range Percent Splice Strand
Dat-PA 1..723 18..738 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:17:50 Download gff for BO06323.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3318-PB 100..828 18..746 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:59:35 Download gff for BO06323.3prime
Subject Subject Range Query Range Percent Splice Strand
Dat-RA 333..1058 19..746 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:07:05 Download gff for BO06323.3prime
Subject Subject Range Query Range Percent Splice Strand
Dat-RA 333..1058 19..746 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:07:05 Download gff for BO06323.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 24155837..24155977 604..746 97 -> Minus
2R 24156897..24157049 451..603 100 -> Minus
2R 24157114..24157545 19..450 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:59:35 Download gff for BO06323.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20043360..20043500 604..746 97 -> Minus
arm_2R 20044420..20044572 451..603 100 -> Minus
arm_2R 20044637..20045068 19..450 100   Minus

BO06323.5prime Sequence

752 bp (714 high quality bases) assembled on 2005-12-03

> BO06323.5prime
GAAGTTATCAGTCGACATGGAGGACGCATTGACCGTCTCTGGGAAGCCAG
CCGCATGCCCCGTCGACCAGGACTGCCCCTACACCATCGAACTGATCCAG
CCGGAGGATGGGGAGGCGGTGATAGCCATGCTCAAGACCTTTTTCTTCAA
GGATGAACCGCTGAACACCTTCCTCGACCTTGGCGAGTGCAAGGAGCTGG
AGAAGTACTCCCTGAAACCGCTACCCGACAACTGCTCCTACAAGGCGGTC
AACAAGAAGGGCGAGATTATCGGTGTGTTCCTAAATGGACTTATGAGGCG
TCCGTCCCCCGATGATGTGCCCGAAAAGGCGGCCGACTCCTGTGAACATC
CCAAATTCAAGAAGATCCTCTCGCTGATGGACCACGTGGAGGAGCAGTTC
AACATCTTCGACGTGTATCCCGACGAGGAGCTCATCCTGGACGGCAAGAT
CCTGTCGGTGGACACCAACTACCGGGGCCTGGGCATCGCAGGCCGCCTGA
CGGAGAGGGCGTACGAGTACATGCGGGAGAACGGCATCAATGTGTACCAC
GTGCTCTGCTCCAGCCACTACTCCGCCCGGGTGATGGAGAAGCTGGGCTT
CCACGAGGTGTTCCGCATGCAGTTCGCCGACTACAAGCCTCAGGGAGAGG
TGGTCTTCAAGCCGGCGGCCCCGCACGTGGGCATACAGGTGATGGCCAAG
GAAGTGGGTCCCGCGAAGGCGGCGCAGACCAAGCTGGCAAGCTTTCTAGA
CC

BO06323.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG3318-PA 723 Dat-RA 1..720 17..736 3600 100 Plus
CG3318-PB 828 Dat-RB 106..825 17..736 3600 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:03:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dat-RB 1588 CG3318-RB 652..1371 17..736 3600 100 Plus
Dat-RA 1275 CG3318-RA 339..1058 17..736 3600 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24157113..24157545 304..736 2165 100 Plus
2R 25286936 2R 24156895..24157049 150..304 775 100 Plus
2R 25286936 2R 24155843..24155978 17..152 680 100 Plus
Blast to na_te.dros performed on 2015-02-11 05:03:29 has no hits.

BO06323.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:46:23 Download gff for BO06323.5prime
Subject Subject Range Query Range Percent Splice Strand
Dat-PA 1..723 17..737 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:17:52 Download gff for BO06323.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3318-PB 100..828 9..737 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:18:29 Download gff for BO06323.5prime
Subject Subject Range Query Range Percent Splice Strand
Dat-RA 333..1058 9..736 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:43:18 Download gff for BO06323.5prime
Subject Subject Range Query Range Percent Splice Strand
Dat-RA 333..1058 9..736 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:43:18 Download gff for BO06323.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 24157114..24157545 305..736 100   Plus
2R 24155837..24155977 9..151 97 -> Plus
2R 24156897..24157049 152..304 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:18:29 Download gff for BO06323.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20043360..20043500 9..151 97 -> Plus
arm_2R 20044420..20044572 152..304 100 -> Plus
arm_2R 20044637..20045068 305..736 100   Plus

BO06323.complete Sequence

754 bp (754 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ630346

> BO06323.complete
GAAGTTATCAGTCGACATGGAGGACGCATTGACCGTCTCTGGGAAGCCAG
CCGCATGCCCCGTCGACCAGGACTGCCCCTACACCATCGAACTGATCCAG
CCGGAGGATGGGGAGGCGGTGATAGCCATGCTCAAGACCTTTTTCTTCAA
GGATGAACCGCTGAACACCTTCCTCGACCTTGGCGAGTGCAAGGAGCTGG
AGAAGTACTCCCTGAAACCGCTACCCGACAACTGCTCCTACAAGGCGGTC
AACAAGAAGGGCGAGATTATCGGTGTGTTCCTAAATGGACTTATGAGGCG
TCCGTCCCCCGATGATGTGCCCGAAAAGGCGGCCGACTCCTGTGAACATC
CCAAATTCAAGAAGATCCTCTCGCTGATGGACCACGTGGAGGAGCAGTTC
AACATCTTCGACGTGTATCCCGACGAGGAGCTCATCCTGGACGGCAAGAT
CCTGTCGGTGGACACCAACTACCGGGGCCTGGGCATCGCAGGCCGCCTGA
CGGAGAGGGCGTACGAGTACATGCGGGAGAACGGCATCAATGTGTACCAC
GTGCTCTGCTCCAGCCACTACTCCGCCCGGGTGATGGAGAAGCTGGGCTT
CCACGAGGTGTTCCGCATGCAGTTCGCCGACTACAAGCCTCAGGGAGAGG
TGGTCTTCAAGCCGGCGGCCCCGCACGTGGGCATACAGGTGATGGCCAAG
GAAGTGGGTCCCGCGAAGGCGGCGCAGACCAAGCTGGCAAGCTTTCTAGA
CCAT

BO06323.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:08:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dat-RB 828 CG3318-PB 106..825 17..736 3600 100 Plus
Dat-RA 723 CG3318-PA 1..720 17..736 3600 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:09:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dat-RB 1588 CG3318-RB 652..1371 17..736 3600 100 Plus
Dat-RA 1275 CG3318-RA 339..1058 17..736 3600 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:08:58
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24157113..24157545 304..736 2165 100 Plus
2R 25286936 2R 24156895..24157049 150..304 775 100 Plus
2R 25286936 2R 24155843..24155978 17..152 680 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:08:59 has no hits.

BO06323.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:24:30 Download gff for BO06323.complete
Subject Subject Range Query Range Percent Splice Strand
Dat-RB 100..828 9..737 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:48:48 Download gff for BO06323.complete
Subject Subject Range Query Range Percent Splice Strand
Dat-RB 529..1254 9..736 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:40:23 Download gff for BO06323.complete
Subject Subject Range Query Range Percent Splice Strand
Dat-RA 339..1058 17..738 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:24:30 Download gff for BO06323.complete
Subject Subject Range Query Range Percent Splice Strand
Dat-RB 529..1254 9..736 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:45:48 Download gff for BO06323.complete
Subject Subject Range Query Range Percent Splice Strand
Dat-RA 339..1058 17..738 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:45:48 Download gff for BO06323.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24155843..24155977 17..151 100 -> Plus
2R 24156897..24157049 152..304 100 -> Plus
2R 24157114..24157545 305..738 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:40:23 Download gff for BO06323.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20043366..20043500 17..151 100 -> Plus
arm_2R 20044420..20044572 152..304 100 -> Plus
arm_2R 20044637..20045068 305..738 99   Plus

BO06323.pep Sequence

Translation from 16 to 754

> BO06323.pep
MEDALTVSGKPAACPVDQDCPYTIELIQPEDGEAVIAMLKTFFFKDEPLN
TFLDLGECKELEKYSLKPLPDNCSYKAVNKKGEIIGVFLNGLMRRPSPDD
VPEKAADSCEHPKFKKILSLMDHVEEQFNIFDVYPDEELILDGKILSVDT
NYRGLGIAGRLTERAYEYMRENGINVYHVLCSSHYSARVMEKLGFHEVFR
MQFADYKPQGEVVFKPAAPHVGIQVMAKEVGPAKAAQTKLASFLDH

BO06323.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:23:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dat-PA 240 CG3318-PA 1..240 1..240 1266 100 Plus
Dat-PB 275 CG3318-PB 36..275 1..240 1266 100 Plus
CG13759-PD 228 CG13759-PD 4..216 25..230 234 29.5 Plus
CG13759-PC 228 CG13759-PC 4..216 25..230 234 29.5 Plus
CG13759-PB 228 CG13759-PB 4..216 25..230 234 29.5 Plus