Clone Sequence Records
BO06324.3prime Sequence
845 bp (773 high quality bases) assembled on 2005-12-03
> BO06324.3prime
ATGGTCTAGAAAGCTTGCGTGGAATAAAAGGTTGCCCTTCTTGGCGGCTA
TGGGCAAGCGGTCGCCCTGGAGGAACGGGTTTATGACCGCGTCGTCCAGC
CGAGGATCGGGCATCACAGGATATCCGGCCTTCTTAGCCAGGCTGTTAAC
GTTGTTCAGGCTGTTCTCCTGGCCCATCTGCATGATGTACTGCTCCACGG
CGGAGTTCAGGTCACCCTTGTCGCCGCCCACATCAGCACTATCCTGTTCC
GAGCAGTCGAACATATGCTCGTTGTCGCAGGTACAGTCCTGAGCGGCCTG
GAACTCCCGGCTGAAGATGGCCGTGTTTTCGAAGTCGACAATGCAGCTGC
CGCCTTGCGTCTCCATGTCGTAGCCCTCAGGGCAGGGATTAGGAGGGTTG
CAGTAGGCAGGCAGGCCGGCGTCGTTCTTCACTATAGTGGGATACCTGTT
GGGACCCTCTCCCATTCCGCCGGAGATGAACTGGTGACCCCACAGCGAAC
TGTGCTGCAGAAACTCGTCATCCCGCAGCGAAGGATGGGAGGCAGCTCCC
GATGCCGAGCCCGATTGCAGGATGCAGTCGCTTCCGCCGTCACACAGCCT
CGCGTACTCCGACCGGGAGACCAGGTCCACGTTGTCCTTGGAGCCAGCGG
CTGCCTCGTTGCCCACGTCGTAATAGCCCACCTGCATGTCTTTGTCCATG
CGATTCAGCAGATCCGTCATCAAGACATCGGCAAGAATATCCTTGGCGCT
ATAGGACTGCACCTGGTAGCCACTCAGGGCGACCACGAGCATCGCCACCA
TCATGTACACACTTTGCGAACGGAACAACATGTCGACTGATAACT
BO06324.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1168-PA | 816 | 7B2-RA | 1..813 | 831..19 | 4040 | 99.8 | Minus |
| CG1168-PB | 831 | 7B2-RB | 35..828 | 812..19 | 3945 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:37:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 7B2-RA | 1133 | CG1168-RA | 153..965 | 831..19 | 4050 | 99.9 | Minus |
| 7B2-RB | 1148 | CG1168-RB | 187..980 | 812..19 | 3955 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:37:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5377014..5377807 | 812..19 | 3955 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:37:33 has no hits.
BO06324.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:46:24 Download gff for
BO06324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1168-PA | 1..816 | 15..831 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:17:54 Download gff for
BO06324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1168-PA | 1..816 | 15..831 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 05:59:50 Download gff for
BO06324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RA | 171..1001 | 8..841 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:11:31 Download gff for
BO06324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RA | 145..975 | 8..841 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:11:31 Download gff for
BO06324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5377014..5377817 | 8..812 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 05:59:50 Download gff for
BO06324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1202736..1203539 | 8..812 | 99 | | Minus |
BO06324.5prime Sequence
801 bp (712 high quality bases) assembled on 2005-12-03
> BO06324.5prime
GAAGTTATCAGTCGACATGTTGTTCCGTTCGCAAAGTGTGTACATGATGG
TGGCGATGCTCGTGGTCGCCTTGAGTGGCTACCAGGTGCAGTCCTATAGC
GCCAAGGATATTCTTGCCGATGTCTTGATGACGGATCTGCTGAATCGCAT
GGACAAAGACATGCAGGTGGGCTATTACGACGTGGGCAACGAGGCAGCCG
CTGGCTCCAAGGACAACGTGGACCTGGTCTCCCGGTCGGAGTACGCGAGG
CTGTGTGACGGCGGAAGCGACTGCATCCTGCAATCGGGCTCGGCATCGGG
AGCTGCCTCCCATCCTTCGCTGCGGGATGACGAGTTTCTGCAGCACAGTT
CGCTGTGGGGTCACCAGTTCATCTCCGGCGGAATGGGAGAGGGTCCCAAC
AGGTATCCCACTATAGTGAAGAACGACGCCGGCCTGCCTGCCTACTGCAA
CCCTCCTAATCCCTGCCCTGAGGGCTACGACATGGAGACGCAAGGCGGCA
GCTGCATTGTCGACTTCGAAAACACGGCCATCTTCAGCCGGGAGTTCCAG
GCCGCTCAGGACTGTACCTGCGACAACGAGCATATGTTCGACTGCTCGGA
ACAGGATAGTGCTGATGTGGGCGGCGACAAGGGTGACCTGAACTCCGCCG
TGGAGCAGTACATCATGCAGATGGGCCAGGAGAACAGCCTGAACAACGTT
AACAGCCTGGCTAAGAAGGCCGGATATCCTGTGATGCCCGATCCTCGGCT
GGACGACGCGGTCATAAACCCGTTCCTCCAGGGCGACCGCTTGCCCATAG
C
BO06324.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1168-PA | 816 | 7B2-RA | 1..785 | 17..801 | 3925 | 100 | Plus |
| CG1168-PB | 831 | 7B2-RB | 35..800 | 36..801 | 3830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:11:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 7B2-RA | 1133 | CG1168-RA | 153..937 | 17..801 | 3925 | 100 | Plus |
| 7B2-RB | 1148 | CG1168-RB | 187..952 | 36..801 | 3830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:11:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5377014..5377779 | 36..801 | 3830 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 19:11:37 has no hits.
BO06324.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:46:25 Download gff for
BO06324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1168-PA | 1..785 | 17..801 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:17:55 Download gff for
BO06324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1168-PA | 1..785 | 17..801 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:05:29 Download gff for
BO06324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RA | 171..963 | 7..801 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:17:50 Download gff for
BO06324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RA | 145..937 | 7..801 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:17:50 Download gff for
BO06324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5377014..5377779 | 36..801 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:05:29 Download gff for
BO06324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1202736..1203501 | 36..801 | 100 | | Plus |
BO06324.complete Sequence
847 bp (847 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630347
> BO06324.complete
GAAGTTATCAGTCGACATGTTGTTCCGTTCGCAAAGTGTGTACATGATGG
TGGCGATGCTCGTGGTCGCCTTGAGTGGCTACCAGGTGCAGTCCTATAGC
GCCAAGGATATTCTTGCCGATGTCTTGATGACGGATCTGCTGAATCGCAT
GGACAAAGACATGCAGGTGGGCTATTACGACGTGGGCAACGAGGCAGCCG
CTGGCTCCAAGGACAACGTGGACCTGGTCTCCCGGTCGGAGTACGCGAGG
CTGTGTGACGGCGGAAGCGACTGCATCCTGCAATCGGGCTCGGCATCGGG
AGCTGCCTCCCATCCTTCGCTGCGGGATGACGAGTTTCTGCAGCACAGTT
CGCTGTGGGGTCACCAGTTCATCTCCGGCGGAATGGGAGAGGGTCCCAAC
AGGTATCCCACTATAGTGAAGAACGACGCCGGCCTGCCTGCCTACTGCAA
CCCTCCTAATCCCTGCCCTGAGGGCTACGACATGGAGACGCAAGGCGGCA
GCTGCATTGTCGACTTCGAAAACACGGCCATCTTCAGCCGGGAGTTCCAG
GCCGCTCAGGACTGTACCTGCGACAACGAGCATATGTTCGACTGCTCGGA
ACAGGATAGTGCTGATGTGGGCGGCGACAAGGGTGACCTGAACTCCGCCG
TGGAGCAGTACATCATGCAGATGGGCCAGGAGAACAGCCTGAACAACGTT
AACAGCCTGGCTAAGAAGGCCGGATATCCTGTGATGCCCGATCCTCGGCT
GGACGACGCGGTCATAAACCCGTTCCTCCAGGGCGACCGCTTGCCCATAG
CCGCCAAGAAGGGCAACCTTTTATTCCACGCAAGCTTTCTAGACCAT
BO06324.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:50:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 7B2-RA | 816 | CG1168-PA | 1..813 | 17..829 | 4065 | 100 | Plus |
| 7B2-RB | 831 | CG1168-PB | 35..828 | 36..829 | 3970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:50:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 7B2-RA | 1133 | CG1168-RA | 153..965 | 17..829 | 4065 | 100 | Plus |
| 7B2-RB | 1148 | CG1168-RB | 187..980 | 36..829 | 3970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:50:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5377014..5377807 | 36..829 | 3970 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:50:08 has no hits.
BO06324.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:24:31 Download gff for
BO06324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RA | 1..816 | 17..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:48:50 Download gff for
BO06324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RA | 171..1001 | 7..840 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:42:09 Download gff for
BO06324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RA | 184..991 | 22..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:24:32 Download gff for
BO06324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RA | 171..1001 | 7..840 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:31:59 Download gff for
BO06324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RA | 158..965 | 22..831 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:31:59 Download gff for
BO06324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5377014..5377807 | 36..831 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:42:09 Download gff for
BO06324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1202736..1203529 | 36..831 | 99 | | Plus |
BO06324.pep Sequence
Translation from 16 to 847
> BO06324.pep
MLFRSQSVYMMVAMLVVALSGYQVQSYSAKDILADVLMTDLLNRMDKDMQ
VGYYDVGNEAAAGSKDNVDLVSRSEYARLCDGGSDCILQSGSASGAASHP
SLRDDEFLQHSSLWGHQFISGGMGEGPNRYPTIVKNDAGLPAYCNPPNPC
PEGYDMETQGGSCIVDFENTAIFSREFQAAQDCTCDNEHMFDCSEQDSAD
VGGDKGDLNSAVEQYIMQMGQENSLNNVNSLAKKAGYPVMPDPRLDDAVI
NPFLQGDRLPIAAKKGNLLFHASFLDH
BO06324.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:23:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 7B2-PA | 271 | CG1168-PA | 1..271 | 1..271 | 1436 | 100 | Plus |
| 7B2-PB | 276 | CG1168-PB | 1..276 | 1..271 | 1417 | 97.8 | Plus |
