Clone BO06325 Report

Search the DGRC for BO06325

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:63
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG33107-RA
Protein status:BO06325.pep: validated full length
Sequenced Size:907

Clone Sequence Records

BO06325.3prime Sequence

846 bp (752 high quality bases) assembled on 2005-12-03

> BO06325.3prime
ATGGTCTAGAAAGCTTGCTTGGAACTCTGAATTTGTTTGCTCGGAAATCT
TGAAGCTGCAAAGTTGGGGTGTTGTTGAGGCGCCCCGAACCACGCAATAA
GCTATGAATCGTTCAATCATCATTTCAAAGTCGCCATAGGCGGCGGAGTG
ATCCATGCGCACCTGCAGGAAGTACTTGTGTATCTCGGCACCCAGATTGT
CCTTCCAATCAGGACACTCCTCGCGTATACGTCTGCAATTGATGATCATG
CTGAAAGTGCGGATGAGCATAAACAAATCTGCCTGGCGTCCACTGTTTGC
CAACTGGCGCCAGTTGACCGTTTTGGCCATTTCAAAAGCCTTGAGAGCAT
ATTCCTTCTGGTCCAGTTCAACTGGTTCTCCCGTGTACCGTCCCATTATG
GTGAGTAGCAGGGCCATAGCTACATCGTTGCCAAGATGGCAGGATTCTAC
CATGGCGGGAATCGCGGCCTGCAGGTCCAGCACTCTTTCCAGGCGCTCCA
TACCCACGCCAGTGATAAGGTTTTCGTACAACCCACTGGCCATGTAGAAC
ATCTCCTCCGAGTCCAGGGACTCTGCCAGGTGACACACCACATCCACCAT
CATGTAGCGCTCCTTCATCAGCAGAACGTTGTCCCTTTGGTACGTCATCA
TCATAATGGAGAGGGTAAACAGATCGAGCAGCTGCTGCAAATTGAGTTCC
AGCTTCCCGGCTAAGGTAGCCATCATGCGATTCAGCAACTGTTTGCCGTC
TGTGGTTTCTGCAGCGTAAGGAAAACAATGCTTGATGGACGACTTCCGGA
GAAAGGACATGATGGATTCGTGGTCATAGCCTAGGCGCATTTCATC

BO06325.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG33107-PA 876 CG33107-RA 46..873 846..19 4090 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:38:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG33107-RA 1067 CG33107-RA 120..947 846..19 4110 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:38:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22583699..22583929 118..348 1155 100 Plus
3R 32079331 3R 22583987..22584193 348..554 1035 100 Plus
3R 32079331 3R 22584250..22584437 553..740 940 100 Plus
3R 32079331 3R 22584492..22584599 739..846 510 98.1 Plus
3R 32079331 3R 22583472..22583523 19..70 260 100 Plus
3R 32079331 3R 22583595..22583642 71..118 240 100 Plus
Blast to na_te.dros performed on 2015-02-10 15:38:23 has no hits.

BO06325.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:46:26 Download gff for BO06325.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33107-PA 46..876 15..846 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:17:56 Download gff for BO06325.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33107-PA 46..876 15..846 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 05:59:54 Download gff for BO06325.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33107-RA 120..952 11..846 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:11:38 Download gff for BO06325.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33107-RA 120..952 11..846 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:11:38 Download gff for BO06325.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 22583467..22583523 11..70 93 <- Plus
3R 22583595..22583641 71..117 100 <- Plus
3R 22583699..22583929 118..348 100 <- Plus
3R 22583988..22584191 349..552 100 <- Plus
3R 22584250..22584435 553..738 100 <- Plus
3R 22584492..22584599 739..846 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 05:59:54 Download gff for BO06325.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18409317..18409363 71..117 100 <- Plus
arm_3R 18410214..18410321 739..846 98   Plus
arm_3R 18409189..18409245 11..70 93 <- Plus
arm_3R 18409421..18409651 118..348 100 <- Plus
arm_3R 18409710..18409913 349..552 100 <- Plus
arm_3R 18409972..18410157 553..738 100 <- Plus

BO06325.5prime Sequence

828 bp (806 high quality bases) assembled on 2005-12-03

> BO06325.5prime
GAAGTTATCAGTCGACATGAATCTATCTGATTCATCGTTGAATAATTCCC
TCGTGGAAGTGGATGAAATGCGCCTAGGCTATGACCACGAATCCATCATG
TCCTTTCTCCGGAAGTCGTCCATCAAGCATTTGTTTCCTTACGCTGCAGA
AACCACAGACGGCAAACAGTTGCTGAATCGCATGATGGCTACCTTAGCCG
GGAAGCTGGAACTCAATTTGCAGCAGCTGCTCGATCTGTTTACCCTCTCC
ATTATGATGATGACGTACCAAAGGGACAACGTTCTGCTGATGAAGGAGCG
CTACATGATGGTGGATGTGGTGTGTCACCTGGCAGAGTCCCTGGACTCGG
AGGAGATGTTCTACATGGCCAGTGGGTTGTACGAAAACCTTATCACTGGC
GTGGGTATGGAGCGCCTGGAAAGAGTGCTGGACCTGCAGGCCGCGATTCC
CGCCATGGTAGAATCCTGCCATCTTGGCAACGATGTAGCTATGGCCCTGC
TACTCACCATAATGGGACGGTACACGGGAGAACCAGTTGAACTGGACCAG
AAGGAATATGCTCTCAAGGCTTTTGAAATGGCCAAAACGGTCAACTGGCG
CCAGTTGGCAAACAGTGGACGCCAGGCAGATTTGTTTATGCTCATCCGCA
CTTTCAGCATGATCATCAATTGCAGACGTATACGCGAGGAGTGTCCTGAT
TGGAAGGACAATCTGGGTGCCGAGATACACAAGTACTTCCTGCAGGTGCG
CATGGATCACTCCGCCGCCTATGGCGACTTTGAAATGATGATTGAACGAT
TCATAGCTTATTGCGTGGTTCGGGGCGC

BO06325.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG33107-PA 876 CG33107-RA 1..812 17..828 4060 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:39:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG33107-RA 1067 CG33107-RA 75..886 17..828 4060 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:39:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22583699..22583929 790..560 1155 100 Minus
3R 32079331 3R 22583987..22584193 560..354 1035 100 Minus
3R 32079331 3R 22584250..22584437 355..168 940 100 Minus
3R 32079331 3R 22584492..22584644 169..17 765 100 Minus
3R 32079331 3R 22583604..22583642 828..790 195 100 Minus
Blast to na_te.dros performed on 2015-02-10 15:39:39 has no hits.

BO06325.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:46:27 Download gff for BO06325.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33107-PA 1..812 17..828 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:17:58 Download gff for BO06325.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33107-PA 1..812 17..828 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 05:59:57 Download gff for BO06325.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33107-RA 66..886 9..828 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:11:50 Download gff for BO06325.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33107-RA 66..886 9..828 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:11:50 Download gff for BO06325.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 22583699..22583929 560..790 100 <- Minus
3R 22583988..22584191 356..559 100 <- Minus
3R 22584250..22584435 170..355 100 <- Minus
3R 22584492..22584653 9..169 97   Minus
3R 22583604..22583641 791..828 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 05:59:57 Download gff for BO06325.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18409326..18409363 791..828 100 <- Minus
arm_3R 18409421..18409651 560..790 100 <- Minus
arm_3R 18409710..18409913 356..559 100 <- Minus
arm_3R 18409972..18410157 170..355 100 <- Minus
arm_3R 18410214..18410375 9..169 97   Minus

BO06325.complete Sequence

907 bp (907 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ630348

> BO06325.complete
GAAGTTATCAGTCGACATGAATCTATCTGATTCATCGTTGAATAATTCCC
TCGTGGAAGTGGATGAAATGCGCCTAGGCTATGACCACGAATCCATCATG
TCCTTTCTCCGGAAGTCGTCCATCAAGCATTTGTTTCCTTACGCTGCAGA
AACCACAGACGGCAAACAGTTGCTGAATCGCATGATGGCTACCTTAGCCG
GGAAGCTGGAACTCAATTTGCAGCAGCTGCTCGATCTGTTTACCCTCTCC
ATTATGATGATGACGTACCAAAGGGACAACGTTCTGCTGATGAAGGAGCG
CTACATGATGGTGGATGTGGTGTGTCACCTGGCAGAGTCCCTGGACTCGG
AGGAGATGTTCTACATGGCCAGTGGGTTGTACGAAAACCTTATCACTGGC
GTGGGTATGGAGCGCCTGGAAAGAGTGCTGGACCTGCAGGCCGCGATTCC
CGCCATGGTAGAATCCTGCCATCTTGGCAACGATGTAGCTATGGCCCTGC
TACTCACCATAATGGGACGGTACACGGGAGAACCAGTTGAACTGGACCAG
AAGGAATATGCTCTCAAGGCTTTTGAAATGGCCAAAACGGTCAACTGGCG
CCAGTTGGCAAACAGTGGACGCCAGGCAGATTTGTTTATGCTCATCCGCA
CTTTCAGCATGATCATCAATTGCAGACGTATACGCGAGGAGTGTCCTGAT
TGGAAGGACAATCTGGGTGCCGAGATACACAAGTACTTCCTGCAGGTGCG
CATGGATCACTCCGCCGCCTATGGCGACTTTGAAATGATGATTGAACGAT
TCATAGCTTATTGCGTGGTTCGGGGCGCCTCAACAACACCCCAACTTTGC
AGCTTCAAGATTTCCGAGCAAACAAATTCAGAGTTCCAAGCAAGCTTTCT
AGACCAT

BO06325.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:33:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG33107-RA 876 CG33107-PA 1..873 17..889 4365 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:33:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG33107-RA 1067 CG33107-RA 75..947 17..889 4365 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:33:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22583699..22583929 790..560 1155 100 Minus
3R 32079331 3R 22583987..22584193 560..354 1035 100 Minus
3R 32079331 3R 22584250..22584437 355..168 940 100 Minus
3R 32079331 3R 22584492..22584644 169..17 765 100 Minus
3R 32079331 3R 22583472..22583523 889..838 260 100 Minus
3R 32079331 3R 22583595..22583642 837..790 240 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:33:02 has no hits.

BO06325.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:24:33 Download gff for BO06325.complete
Subject Subject Range Query Range Percent Splice Strand
CG33107-RA 1..876 17..893 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:48:52 Download gff for BO06325.complete
Subject Subject Range Query Range Percent Splice Strand
CG33107-RA 160..1046 9..897 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:41 Download gff for BO06325.complete
Subject Subject Range Query Range Percent Splice Strand
CG33107-RA 75..947 17..891 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:24:33 Download gff for BO06325.complete
Subject Subject Range Query Range Percent Splice Strand
CG33107-RA 160..1046 9..897 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:21:02 Download gff for BO06325.complete
Subject Subject Range Query Range Percent Splice Strand
CG33107-RA 75..947 17..891 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:21:02 Download gff for BO06325.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22584250..22584435 170..355 100 <- Minus
3R 22584492..22584644 17..169 100   Minus
3R 22583470..22583523 838..891 96 <- Minus
3R 22583595..22583641 791..837 100 <- Minus
3R 22583699..22583929 560..790 100 <- Minus
3R 22583988..22584191 356..559 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:41 Download gff for BO06325.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18410214..18410366 17..169 100   Minus
arm_3R 18409192..18409245 838..891 96 <- Minus
arm_3R 18409317..18409363 791..837 100 <- Minus
arm_3R 18409421..18409651 560..790 100 <- Minus
arm_3R 18409710..18409913 356..559 100 <- Minus
arm_3R 18409972..18410157 170..355 100 <- Minus

BO06325.pep Sequence

Translation from 16 to 907

> BO06325.pep
MNLSDSSLNNSLVEVDEMRLGYDHESIMSFLRKSSIKHLFPYAAETTDGK
QLLNRMMATLAGKLELNLQQLLDLFTLSIMMMTYQRDNVLLMKERYMMVD
VVCHLAESLDSEEMFYMASGLYENLITGVGMERLERVLDLQAAIPAMVES
CHLGNDVAMALLLTIMGRYTGEPVELDQKEYALKAFEMAKTVNWRQLANS
GRQADLFMLIRTFSMIINCRRIREECPDWKDNLGAEIHKYFLQVRMDHSA
AYGDFEMMIERFIAYCVVRGASTTPQLCSFKISEQTNSEFQASFLDH

BO06325.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:23:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG33107-PA 291 CG33107-PA 1..291 1..291 1488 100 Plus